BLASTX nr result
ID: Coptis21_contig00003884
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003884 (2050 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containi... 449 e-123 emb|CBI27939.3| unnamed protein product [Vitis vinifera] 449 e-123 ref|XP_002330519.1| predicted protein [Populus trichocarpa] gi|2... 441 e-121 ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat... 413 e-112 ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat... 405 e-110 >ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like [Vitis vinifera] Length = 1005 Score = 449 bits (1155), Expect = e-123 Identities = 209/326 (64%), Positives = 256/326 (78%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 KCGC++D E VF LVSRD VSWN+ ICGY+Q+G G KAL AF+ MLDEG PDE+TFIG Sbjct: 680 KCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIG 739 Query: 1867 VLSACSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPFV 1688 VLSACSH+GLI+EGK HF S+SK+YGITPT++HYACMVDILGRAG+ EV++FIE+M Sbjct: 740 VLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 799 Query: 1687 PDSLIWQTVLGACVRHGNVEMAEKAAEELFILEPQMDSTYILLSNIYAAKRRWDDVSKVR 1508 + LIW+TVLGAC HGN+E E+AA +LF LEP++DS YILLSN++AAK WDDV+ VR Sbjct: 800 SNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVR 859 Query: 1507 ERMSSQGVKKEPGCSWVEIDGQVHVFVSRDVSHPNVKKIYQKLDEMGQELMLAGYVPDTD 1328 MS++GVKKEPGCSWVE++GQVHVF+S D SHP +++I+ KL ++ Q+LM GY P+TD Sbjct: 860 ALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTD 919 Query: 1327 SVLHNVSDAEKKESLLYHSERLALAFSLISTPPGKQIRIFKNLRICRDCHNALKLXXXXX 1148 VLHNVSD EK+E L YHSERLALAF+L+ST K IRIFKNLRIC DCH+ +K Sbjct: 920 HVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEIT 979 Query: 1147 XXXXXXXXXXRFHHFQNGSCSCCDFW 1070 FHHF+NGSCSC +FW Sbjct: 980 NQELVVRDINCFHHFKNGSCSCQNFW 1005 Score = 79.7 bits (195), Expect = 3e-12 Identities = 43/145 (29%), Positives = 75/145 (51%) Frame = -1 Query: 2035 IKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIGVLSA 1856 ++D E +F+ L+ RD+ +W + GYAQ G GEKA+ F M EG P+E T LS Sbjct: 583 LEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSG 642 Query: 1855 CSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPFVPDSL 1676 CS + + G+ SM+ G + + + +VD+ + G +++ + + + D++ Sbjct: 643 CSRIATLDSGR-QLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGL-VSRDTV 700 Query: 1675 IWQTVLGACVRHGNVEMAEKAAEEL 1601 W T++ +HG A KA E + Sbjct: 701 SWNTIICGYSQHGQGGKALKAFEAM 725 Score = 62.8 bits (151), Expect = 3e-07 Identities = 42/140 (30%), Positives = 63/140 (45%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 KCG VF + RD+VSW + I G+ GYG A+N F M EG +E T+ Sbjct: 175 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYAT 234 Query: 1867 VLSACSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPFV 1688 L ACS ++ GK KV G L + +VD+ + G + + MP Sbjct: 235 ALKACSMCLDLEFGKQVHAEAIKV-GDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-K 292 Query: 1687 PDSLIWQTVLGACVRHGNVE 1628 +++ W +L + G+ E Sbjct: 293 QNAVSWNALLNGFAQMGDAE 312 >emb|CBI27939.3| unnamed protein product [Vitis vinifera] Length = 764 Score = 449 bits (1155), Expect = e-123 Identities = 209/326 (64%), Positives = 256/326 (78%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 KCGC++D E VF LVSRD VSWN+ ICGY+Q+G G KAL AF+ MLDEG PDE+TFIG Sbjct: 439 KCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIG 498 Query: 1867 VLSACSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPFV 1688 VLSACSH+GLI+EGK HF S+SK+YGITPT++HYACMVDILGRAG+ EV++FIE+M Sbjct: 499 VLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 558 Query: 1687 PDSLIWQTVLGACVRHGNVEMAEKAAEELFILEPQMDSTYILLSNIYAAKRRWDDVSKVR 1508 + LIW+TVLGAC HGN+E E+AA +LF LEP++DS YILLSN++AAK WDDV+ VR Sbjct: 559 SNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVR 618 Query: 1507 ERMSSQGVKKEPGCSWVEIDGQVHVFVSRDVSHPNVKKIYQKLDEMGQELMLAGYVPDTD 1328 MS++GVKKEPGCSWVE++GQVHVF+S D SHP +++I+ KL ++ Q+LM GY P+TD Sbjct: 619 ALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTD 678 Query: 1327 SVLHNVSDAEKKESLLYHSERLALAFSLISTPPGKQIRIFKNLRICRDCHNALKLXXXXX 1148 VLHNVSD EK+E L YHSERLALAF+L+ST K IRIFKNLRIC DCH+ +K Sbjct: 679 HVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEIT 738 Query: 1147 XXXXXXXXXXRFHHFQNGSCSCCDFW 1070 FHHF+NGSCSC +FW Sbjct: 739 NQELVVRDINCFHHFKNGSCSCQNFW 764 Score = 79.7 bits (195), Expect = 3e-12 Identities = 43/145 (29%), Positives = 75/145 (51%) Frame = -1 Query: 2035 IKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIGVLSA 1856 ++D E +F+ L+ RD+ +W + GYAQ G GEKA+ F M EG P+E T LS Sbjct: 342 LEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSG 401 Query: 1855 CSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPFVPDSL 1676 CS + + G+ SM+ G + + + +VD+ + G +++ + + + D++ Sbjct: 402 CSRIATLDSGR-QLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGL-VSRDTV 459 Query: 1675 IWQTVLGACVRHGNVEMAEKAAEEL 1601 W T++ +HG A KA E + Sbjct: 460 SWNTIICGYSQHGQGGKALKAFEAM 484 Score = 59.7 bits (143), Expect = 3e-06 Identities = 40/144 (27%), Positives = 62/144 (43%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 KCG VF + RD+VSW + I G+ GYG L F ML EG P+ TFI Sbjct: 238 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFIS 296 Query: 1867 VLSACSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPFV 1688 +L +CS + + GK + K + +VD+ + L++ + ++ Sbjct: 297 ILRSCSSLSDVDLGKQVHAQIVK-NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IK 354 Query: 1687 PDSLIWQTVLGACVRHGNVEMAEK 1616 D W ++ + G E A K Sbjct: 355 RDLFAWTVIVAGYAQDGQGEKAVK 378 >ref|XP_002330519.1| predicted protein [Populus trichocarpa] gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa] Length = 726 Score = 441 bits (1135), Expect = e-121 Identities = 208/327 (63%), Positives = 257/327 (78%) Frame = -1 Query: 2050 GKCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFI 1871 GKCGC++ EA+F L+SRDIVSWN+ I GY+Q+G GEKAL AF+ ML EG PDE TFI Sbjct: 400 GKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFI 459 Query: 1870 GVLSACSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPF 1691 GVLSACS +GL++EGK F+SMSK+YGI P+++HYACMVDILGRAG+ +EV+ FIE+M Sbjct: 460 GVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNL 519 Query: 1690 VPDSLIWQTVLGACVRHGNVEMAEKAAEELFILEPQMDSTYILLSNIYAAKRRWDDVSKV 1511 P SLIW+TVLGAC HGNV+ EKAA++LF +EP MDS+YILLSNI+A+K RWDDV + Sbjct: 520 TPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNI 579 Query: 1510 RERMSSQGVKKEPGCSWVEIDGQVHVFVSRDVSHPNVKKIYQKLDEMGQELMLAGYVPDT 1331 R M+S+G+KKEPGCSWVE+DGQVHVF+S+D SHP +++IY KLD++GQ LM GYVP T Sbjct: 580 RALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKT 639 Query: 1330 DSVLHNVSDAEKKESLLYHSERLALAFSLISTPPGKQIRIFKNLRICRDCHNALKLXXXX 1151 + VLHNVS+ EK E L YHSERLAL+F+L+ST K IRIFKNLRIC DCH+ +KL Sbjct: 640 EVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDI 699 Query: 1150 XXXXXXXXXXXRFHHFQNGSCSCCDFW 1070 RFHHF+ G+CSC D W Sbjct: 700 TNQEIVVRDIRRFHHFKRGTCSCQDRW 726 Score = 84.3 bits (207), Expect = 1e-13 Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 15/194 (7%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 K C++D F LV+RDI SW I GYAQ EKA+ F+ M EG P+E T Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359 Query: 1867 VLSACSHVGLIKEGKYHFESMSKVYGITPTLKHY------ACMVDILGRAGRLDEVQNFI 1706 LS CSH+ ++ G+ +++ + H+ + +VD+ G+ G ++ + Sbjct: 360 CLSGCSHMATLENGR-------QLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIF 412 Query: 1705 EKMPFVPDSLIWQTVLGACVRHGNVEMAEKAAEELFILEPQM--DSTYI-------LLSN 1553 + + D + W T++ +HG E A +A + + E M ++T+I + Sbjct: 413 KGL-ISRDIVSWNTIISGYSQHGQGEKALEAF-RMMLSEGIMPDEATFIGVLSACSFMGL 470 Query: 1552 IYAAKRRWDDVSKV 1511 + K+R+D +SK+ Sbjct: 471 VEEGKKRFDSMSKI 484 >ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g09950-like [Cucumis sativus] Length = 989 Score = 413 bits (1061), Expect = e-112 Identities = 193/326 (59%), Positives = 247/326 (75%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 KCGC+++ EA+F L+ RD ++WN+ ICGYAQ G G KAL AF+ MLDEG +PD +TF G Sbjct: 664 KCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTG 723 Query: 1867 VLSACSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPFV 1688 +LSACSH GL++EGK HF SM + +GI+PT+ H ACMVDILGR G+ DE+++FI+KM Sbjct: 724 ILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLS 783 Query: 1687 PDSLIWQTVLGACVRHGNVEMAEKAAEELFILEPQMDSTYILLSNIYAAKRRWDDVSKVR 1508 ++LIW+TVLGA H N+ + EKAA +LF L+P+ +S+YILLSNI+A + RWDDV +VR Sbjct: 784 QNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVR 843 Query: 1507 ERMSSQGVKKEPGCSWVEIDGQVHVFVSRDVSHPNVKKIYQKLDEMGQELMLAGYVPDTD 1328 MSS+GVKKEPGCSWVE +GQVH FVS D SHP +++I+ KLDE+ +EL YVP T+ Sbjct: 844 SLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTE 903 Query: 1327 SVLHNVSDAEKKESLLYHSERLALAFSLISTPPGKQIRIFKNLRICRDCHNALKLXXXXX 1148 VLHNV + EKKE+L +HSERLAL F+LIST K+IRIFKNLRICRDCH+ +K Sbjct: 904 YVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSIT 963 Query: 1147 XXXXXXXXXXRFHHFQNGSCSCCDFW 1070 RFHHF+NG+CSC DFW Sbjct: 964 NQEIVVRDVRRFHHFKNGACSCNDFW 989 Score = 79.0 bits (193), Expect = 5e-12 Identities = 44/137 (32%), Positives = 69/137 (50%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 KC ++D + F+ L RD+ +W I YAQ GEKALN F+ M EG P+E T G Sbjct: 563 KCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAG 622 Query: 1867 VLSACSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPFV 1688 LS CS + + EG SM G + + +VD+ + G ++E + E + Sbjct: 623 CLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IR 680 Query: 1687 PDSLIWQTVLGACVRHG 1637 D++ W T++ ++G Sbjct: 681 RDTIAWNTIICGYAQNG 697 Score = 60.1 bits (144), Expect = 2e-06 Identities = 25/66 (37%), Positives = 41/66 (62%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 K GC+ D ++ ++V RD++SWN+++ G G ++ L F ML+EG P+ TFI Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521 Query: 1867 VLSACS 1850 +L +CS Sbjct: 522 ILGSCS 527 >ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g09950-like [Cucumis sativus] Length = 1004 Score = 405 bits (1041), Expect = e-110 Identities = 190/322 (59%), Positives = 244/322 (75%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 KCGC+++ EA+F L+ RD ++WN+ ICGYAQ G G KAL AF+ MLDEG +PD +TF G Sbjct: 664 KCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTG 723 Query: 1867 VLSACSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPFV 1688 +LSACSH GL++EGK HF SM + +GI+PT+ H ACMVDILGR G+ DE+++FI+KM Sbjct: 724 ILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLS 783 Query: 1687 PDSLIWQTVLGACVRHGNVEMAEKAAEELFILEPQMDSTYILLSNIYAAKRRWDDVSKVR 1508 ++LIW+TVLGA H N+ + EKAA +LF L+P+ +S+YILLSNI+A + RWDDV +VR Sbjct: 784 QNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVR 843 Query: 1507 ERMSSQGVKKEPGCSWVEIDGQVHVFVSRDVSHPNVKKIYQKLDEMGQELMLAGYVPDTD 1328 MSS+GVKKEPGCSWVE +GQVH FVS D SHP +++I+ KLDE+ +EL YVP T+ Sbjct: 844 SLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTE 903 Query: 1327 SVLHNVSDAEKKESLLYHSERLALAFSLISTPPGKQIRIFKNLRICRDCHNALKLXXXXX 1148 VLHNV + EKKE+L +HSERLAL F+LIST K+IRIFKNLRICRDCH+ +K Sbjct: 904 YVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSIT 963 Query: 1147 XXXXXXXXXXRFHHFQNGSCSC 1082 RFHHF+NG+CSC Sbjct: 964 NQEIVVRDVRRFHHFKNGACSC 985 Score = 79.0 bits (193), Expect = 5e-12 Identities = 44/137 (32%), Positives = 69/137 (50%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 KC ++D + F+ L RD+ +W I YAQ GEKALN F+ M EG P+E T G Sbjct: 563 KCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAG 622 Query: 1867 VLSACSHVGLIKEGKYHFESMSKVYGITPTLKHYACMVDILGRAGRLDEVQNFIEKMPFV 1688 LS CS + + EG SM G + + +VD+ + G ++E + E + Sbjct: 623 CLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IR 680 Query: 1687 PDSLIWQTVLGACVRHG 1637 D++ W T++ ++G Sbjct: 681 RDTIAWNTIICGYAQNG 697 Score = 60.1 bits (144), Expect = 2e-06 Identities = 25/66 (37%), Positives = 41/66 (62%) Frame = -1 Query: 2047 KCGCIKDVEAVFSNLVSRDIVSWNSFICGYAQYGYGEKALNAFKGMLDEGATPDEITFIG 1868 K GC+ D ++ ++V RD++SWN+++ G G ++ L F ML+EG P+ TFI Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521 Query: 1867 VLSACS 1850 +L +CS Sbjct: 522 ILGSCS 527