BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003870
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2...   147   5e-33
emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]   132   1e-28
ref|XP_003548489.1| PREDICTED: B3 domain-containing transcriptio...   129   1e-27
ref|XP_003622663.1| B3 domain-containing protein [Medicago trunc...   125   1e-26
ref|XP_003622675.1| B3 domain-containing transcription factor VR...   125   2e-26

>ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  147 bits (370), Expect = 5e-33
 Identities = 92/295 (31%), Positives = 152/295 (51%), Gaps = 52/295 (17%)
 Frame = -2

Query: 939 FFKIISSHIIQGGQLEIPKRFISNHGKRLPNVVNLKVPSGAVSRVKLREVDGNVWLGKGW 760
           F+K++ + I+Q  +L+IPK+F++ +G  L +V  L VP G +  V+L++V+G +W  KGW
Sbjct: 2   FYKLMVASILQDKKLKIPKKFVNKYGDELSSVATLTVPCGRICLVELQKVNGKLWFHKGW 61

Query: 759 QEFMERHYIDVGHFLVFNYDGESQFYVVIFDMS-------CNEIHYFNDS---------N 628
            EF+E + I VG+FLVF Y+G+S F V +FD++       CN +    +S         N
Sbjct: 62  HEFVECYSIRVGYFLVFIYEGKSNFNVHMFDLTVSEIKNPCNSLSQLQESSHDNPCLLPN 121

Query: 627 NAGESSQVLRKGEDG--------------------NCVAVRHHSSNGGHSMKYMNT---- 520
              +  + L   EDG                    N   V  H+S G  ++K  +T    
Sbjct: 122 EKDDGLEKLTSTEDGAGSVIPGITRKTRGRKRMSENIEDVDKHASPGIQNVKLKSTHVRN 181

Query: 519 --------RKFTHAQLKLQAVRS---FKSNHPFFRIKMTPSYV-NSKCVPIPKSFSMKYL 376
                   R+    + K + +R+   F+S++PFFR+ + PSYV     + IP SF+  +L
Sbjct: 182 TSETLTRRRRAVTPEEKERTIRAAHMFRSDNPFFRVILRPSYVYRGFLLHIPSSFARTFL 241

Query: 375 PRRSENFKIQASDGKEWAVGCNLNQNGMRLSKGVSAFLSGCKIKLGDICIFELVN 211
              +    +Q SDGK+W V C+      +L +G + F+    ++ GD+CIFEL++
Sbjct: 242 NTVTGFVTLQVSDGKQWPVRCSFKDGKAKLGQGWTEFVWENNLEEGDVCIFELIH 296


>emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]
          Length = 617

 Score =  132 bits (333), Expect = 1e-28
 Identities = 82/243 (33%), Positives = 125/243 (51%), Gaps = 17/243 (6%)
 Frame = -2

Query: 891 IPKRFISNHGKRLPNVVNLKVPSGAVSRVKLREVDGNVWLGKGWQEFMERHYIDVGHFLV 712
           IP+ F+  +G  L N V L +P+GA   V+L ++ G V    GWQ F + + I  GHFL+
Sbjct: 15  IPQTFLREYGNNLSNFVFLHLPTGAEWPVELLKLHGEVLFSSGWQRFADFYSIGYGHFLL 74

Query: 711 FNYDGESQFYVVIFDMSCNEI---------HYFNDSNNAGESSQVLRKGEDGNCVAVRHH 559
           F Y+G S F+V+IFDM+ +EI         HY N    + ES       +  N + +   
Sbjct: 75  FRYEGSSHFHVLIFDMTASEIEYPYATAPNHYHNHHKVSVESMDDFPSSKTANYMDMIDI 134

Query: 558 SS-------NGGHSMKYMNTRKFTHAQLKLQAVRSFKSNHPFFRIKMTPSYVNS-KCVPI 403
           +S       NG  S+  +   +       L+  +SFK   PFF I M PSYV S K + +
Sbjct: 135 TSSEAVFYPNGASSLPKVEDIQGG----ALERAKSFKFEKPFFIITMRPSYVGSKKSLTV 190

Query: 402 PKSFSMKYLPRRSENFKIQASDGKEWAVGCNLNQNGMRLSKGVSAFLSGCKIKLGDICIF 223
           P SF  ++  R + N  +  SDG+ W+V     +N ++ S G + F+    +++GD+C F
Sbjct: 191 PLSFVKRHFKRDNNNTILSVSDGRTWSVKYIKRKNNVQFSSGWTKFVRDNSLEVGDVCAF 250

Query: 222 ELV 214
           ELV
Sbjct: 251 ELV 253



 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 73/304 (24%), Positives = 118/304 (38%), Gaps = 62/304 (20%)
 Frame = -2

Query: 939  FFKIISSHIIQGGQLEIPKRFISNHGKRLPNVVNLKVPSGAVSRVKLREVDGNVWLGKGW 760
            FF+II    +  G   IP+ F+  +G  L + V L +P+GA   V+L ++ G V    GW
Sbjct: 290  FFRIIHPSFLTHGYPGIPQTFLREYGNSLSHFVFLHLPTGAEWGVELLKLHGEVLFSTGW 349

Query: 759  QEFMERHYIDVGHFL-------------VFNYDGESQFYVVIFDMSCNEIHY-------- 643
            Q+F+E + I+ G+FL             VF+       Y    D + +  H+        
Sbjct: 350  QQFVEHYSIEYGYFLLFRYEGDSHFHVLVFDMTASEIEYPYATDPTIDHAHHQVSLEILD 409

Query: 642  ------------------FNDSNNAGESSQVLRKGE-----------------------D 586
                                +  +  E+S +L+  E                        
Sbjct: 410  DFPPSQTTNHVDMIDITSSEEEFHPNEASSLLKSEEIESDFPPTQKTSKTRGKNSSLKPH 469

Query: 585  GNCVAVRHHSSNGGHSMKYMNTRKFTHAQLKLQAVRSFKSNHPFFRIKMTPSYVNSKCVP 406
              C +  +HSS        +   K    Q  LQ  ++FK  +PFF + M  SYVN   V 
Sbjct: 470  NACSSHTYHSSIPDCRDGALQRAKVFKPQNPLQRAKAFKPQNPFFIVTMGWSYVNRHNVT 529

Query: 405  IPKSFSMKYLPRRSENFKIQASDGKEWAVGCNLNQNGMRLSKGVSAFLSGCKIKLGDICI 226
            +P  F  ++    + N  +  SDG+ W++   +       S G   F     +++GD+C 
Sbjct: 530  VPFHFLKRHFRTDNTNTTLSVSDGRAWSIKYIMGARSAHFSAGWRKFAEDNSLEVGDVCA 589

Query: 225  FELV 214
            FELV
Sbjct: 590  FELV 593


>ref|XP_003548489.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 363

 Score =  129 bits (324), Expect = 1e-27
 Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 32/275 (11%)
 Frame = -2

Query: 939 FFKIISSHIIQGGQLEIPKRFISNHGKRLPNVVNLKVPSGAVSRVKLREVDGNVWLGKGW 760
           FFKII++  +Q G+L IP +F+  +G+ LPN + LK P+G      L + DG +W  KGW
Sbjct: 17  FFKIITAQNLQDGKLMIPNKFVEKYGEGLPNALFLKTPNGTEWNFNLEKHDGKIWFQKGW 76

Query: 759 QEFMERHYIDVGHFLVFNYDGESQFYVVIFDMSCNEIHYFNDSNNA-----GESSQVLRK 595
           +EF E H +  GH LVF   G S F V IFD+S  EI Y +           E ++  R 
Sbjct: 77  KEFAEYHSLAHGHLLVFRRHGTSHFQVHIFDLSSLEIDYPSKGTEGKTSPNHEGNKQPRN 136

Query: 594 GEDGNCV---AVRHHSSNGGHSMKYMNTRKFTHAQLK---------------LQAVRSFK 469
            E+   +    VR H S    +M  +      H   K               L    SFK
Sbjct: 137 EENLEYLQPYQVRSHKSVKVENMMTLPEEAQPHTDTKFKEKSKVVVANQVTALDLASSFK 196

Query: 468 SNHPFFRIKMTPSYVNSKCVPIPKSFSMKYLPR-----RSENFKIQASDGKEWAVGCNL- 307
             +PFF + M PSY+ S   P+P     K+  R        +  +Q  +G+ W     + 
Sbjct: 197 PCNPFFLVVMRPSYIQSNGGPLP--LQTKFCRRHFGLLNKRHINLQVLNGRIWPAKYMIQ 254

Query: 306 ---NQNGMRLSKGVSAFLSGCKIKLGDICIFELVN 211
              N+   RL+ G   F+    +K+G++C FEL++
Sbjct: 255 KMKNKTNFRLTSGWKTFVKDNNLKVGNVCTFELID 289


>ref|XP_003622663.1| B3 domain-containing protein [Medicago truncatula]
           gi|355497678|gb|AES78881.1| B3 domain-containing protein
           [Medicago truncatula]
          Length = 315

 Score =  125 bits (315), Expect = 1e-26
 Identities = 83/276 (30%), Positives = 139/276 (50%), Gaps = 27/276 (9%)
 Frame = -2

Query: 957 EEKGASFFKIISSHIIQGGQLEIPKRFISNHGKRLPNVVNLKVPSGAVSRVKLREVDGNV 778
           E K   FFKII +  +Q G+L +P++F+  +G+ L N + LK P+GA  ++ L +++G +
Sbjct: 7   ELKPIHFFKIILAQNLQEGKLMMPRKFVEKYGEGLSNAIYLKTPNGAKWKLNLLKINGKI 66

Query: 777 WLGKGWQEFMERHYIDVGHFLVFNYDGESQFYVVIFDMSCNEIHY--------------F 640
           W  KGW+EF E H +  GH L+F Y   S+F V IF+ S  EI+Y               
Sbjct: 67  WFEKGWKEFAEHHSLAHGHLLLFKYLRNSRFLVRIFEKSALEINYPFQRVAAKNVSNGQK 126

Query: 639 NDSNNAGESSQVLRKGEDG-------NCVAVRHHSSNGGHSMKYMNTRKFTHAQLKLQAV 481
             +N++ E  Q    G +        N VA  HH+       + + T++ T     L+  
Sbjct: 127 RKANSSFEFHQPCEIGSNSCVEVDKLNKVATLHHAGRESKGKQVLATKRVT----ALERA 182

Query: 480 RSFKSNHPFFRIKMTPSYVNSK-CVPIPKSFSMKY--LPRRSENFKIQASDG---KEWAV 319
           +SFK+ +P F + M  SYV  +  V IP+ F  ++  L ++  +  +  ++G    ++ +
Sbjct: 183 QSFKTCNPSFVVVMRASYVEHRFLVNIPRKFGNRHFDLDKKRGDVYLVLNEGIWPAKYLI 242

Query: 318 GCNLNQNGMRLSKGVSAFLSGCKIKLGDICIFELVN 211
              L      L+ G  AF    K+K+ D+C FEL++
Sbjct: 243 RMTLKGPHFDLTTGWKAFAKDNKLKVDDVCKFELIS 278


>ref|XP_003622675.1| B3 domain-containing transcription factor VRN1 [Medicago
           truncatula] gi|355497690|gb|AES78893.1| B3
           domain-containing transcription factor VRN1 [Medicago
           truncatula]
          Length = 341

 Score =  125 bits (313), Expect = 2e-26
 Identities = 89/290 (30%), Positives = 141/290 (48%), Gaps = 40/290 (13%)
 Frame = -2

Query: 960 SEEKGASFFKIISSHIIQGGQLEIPKRFISNHGKRLPNVVNLKVPSGAVSRVKLREVDGN 781
           +E K   FFKII +  +  G L +P++F+  +GK LP  + LK P+GA  R+ L + DG 
Sbjct: 6   AEVKPIQFFKIILAQNLLQGNLRMPRKFVEKYGKGLPKAICLKTPNGAKWRLNLVKSDGK 65

Query: 780 VWLGKGWQEFMERHYIDVGHFLVFNYDGESQFYVVIFDMSCNEIHY-FNDSNNAGESSQV 604
           +W  KGW++F E H I  GH L+F Y+  S+F V IF  S  EI Y F    +   S+  
Sbjct: 66  IWFEKGWKQFAEHHSIGHGHLLLFRYEKTSKFEVQIFGKSALEIDYSFKRVESKKFSNGQ 125

Query: 603 LRKGEDG-NCVAVRHHSSNGGHS------------MKYMNTRKFTHAQL----------- 496
             K  +G NC A +   +N                +K+  ++K    Q+           
Sbjct: 126 GNKPPNGENCRAAQKRKANSSSEFHRQCEIASSSCVKFGKSQKLAVQQVDRMSNGKQVIT 185

Query: 495 ------KLQAVRSFKSNHPFFRIKMTPSYVNSK-CVPIPKSFSMKY--LPRRSENFKIQA 343
                  L+  +SFK  +P F + M  SYV  +  + IP  F   +  L ++ E+ ++QA
Sbjct: 186 TAKKVTTLERAQSFKICNPSFVVVMGASYVERRFLLNIPCLFGKTHFDLNKKREDIQLQA 245

Query: 342 SDGKEWAVGCN----LNQNGMR--LSKGVSAFLSGCKIKLGDICIFELVN 211
            +G+ W+   +     + NG+R  L+ G   F     +K+GD+C FEL++
Sbjct: 246 LNGRVWSARYSTRNRTSDNGIRFELTSGWEEFAKDNNLKVGDVCKFELIS 295