BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003868
         (1572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285915.1| PREDICTED: cytoplasmic tRNA 2-thiolation pro...   650   0.0  
ref|XP_003634474.1| PREDICTED: cytoplasmic tRNA 2-thiolation pro...   640   0.0  
emb|CBI18888.3| unnamed protein product [Vitis vinifera]              639   0.0  
ref|NP_181956.2| cytoplasmic tRNA 2-thiolation protein 1 [Arabid...   632   e-178
ref|XP_002881955.1| hypothetical protein ARALYDRAFT_483552 [Arab...   631   e-178

>ref|XP_002285915.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 1
            [Vitis vinifera]
          Length = 356

 Score =  650 bits (1677), Expect = 0.0
 Identities = 318/355 (89%), Positives = 335/355 (94%), Gaps = 2/355 (0%)
 Frame = -1

Query: 1257 GEA-AKPKKTGGRQCSICNQRRPALKRPKTLEQICRECFYAVFEDEIHKVIVDNKLFKSG 1081
            GEA  KPKK G  QCSIC+QRR ALKRPKTLEQICRECFYAVFE+EIH+V+VDN+LFK G
Sbjct: 2    GEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKPG 61

Query: 1080 ERIGIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEVQY 901
            ERI IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNE+QY
Sbjct: 62   ERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQY 121

Query: 900  GLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNAD 721
            GLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA+LKVDKLATGHNAD
Sbjct: 122  GLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNAD 181

Query: 720  DIAETVLLNILRGDIARLGRCTSIVTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFST 541
            DIAETVLLNILRGDIARL RCTSI+TGEDGPIPRCKPFKYTYEKEIVMYAYFK+LDYFST
Sbjct: 182  DIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKRLDYFST 241

Query: 540  ECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGESFRISNQTKMPEQGTCERCGYISS 361
            ECIYSPNAYRGFAREFIKDLERIRPRAILDII+SGE FRIS   KMPEQGTCERCGYISS
Sbjct: 242  ECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAKMPEQGTCERCGYISS 301

Query: 360  QKWCKACVLLEGLNRGLPRLGIGRTRGL-NGHMTGVEKADGAQSIQSKQCGTLDF 199
            QKWCKACVLLEGLNRGLP+LGIGRTRGL NG     ++++G ++IQSKQCGTLDF
Sbjct: 302  QKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNIQSKQCGTLDF 356


>ref|XP_003634474.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 2
            [Vitis vinifera]
          Length = 363

 Score =  640 bits (1651), Expect = 0.0
 Identities = 316/362 (87%), Positives = 334/362 (92%), Gaps = 9/362 (2%)
 Frame = -1

Query: 1257 GEA-AKPKKTGGRQCSICNQRRPALKRPKTLEQICRECFYAVFEDEIHKVIVDNKLFKSG 1081
            GEA  KPKK G  QCSIC+QRR ALKRPKTLEQICRECFYAVFE+EIH+V+VDN+LFK G
Sbjct: 2    GEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKPG 61

Query: 1080 ERIGIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEVQY 901
            ERI IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNE+QY
Sbjct: 62   ERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQY 121

Query: 900  GLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNAD 721
            GLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA+LKVDKLATGHNAD
Sbjct: 122  GLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNAD 181

Query: 720  DIAETVLLNILRGDIARLGRCTSIVTGEDGPIPRCKPFKYTYEKEIVM-------YAYFK 562
            DIAETVLLNILRGDIARL RCTSI+TGEDGPIPRCKPFKYTYEKEI+        YAYFK
Sbjct: 182  DIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEILQNLNRIYTYAYFK 241

Query: 561  KLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGESFRISNQTKMPEQGTCE 382
            +LDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDII+SGE FRIS   KMPEQGTCE
Sbjct: 242  RLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAKMPEQGTCE 301

Query: 381  RCGYISSQKWCKACVLLEGLNRGLPRLGIGRTRGL-NGHMTGVEKADGAQSIQSKQCGTL 205
            RCGYISSQKWCKACVLLEGLNRGLP+LGIGRTRGL NG     ++++G ++IQSKQCGTL
Sbjct: 302  RCGYISSQKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNIQSKQCGTL 361

Query: 204  DF 199
            DF
Sbjct: 362  DF 363


>emb|CBI18888.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score =  639 bits (1648), Expect = 0.0
 Identities = 317/369 (85%), Positives = 335/369 (90%), Gaps = 16/369 (4%)
 Frame = -1

Query: 1257 GEA-AKPKKTGGRQCSICNQRRPALKRPKTLEQICRECFYAVFEDEIHKVIVDNKLFKSG 1081
            GEA  KPKK G  QCSIC+QRR ALKRPKTLEQICRECFYAVFE+EIH+V+VDN+LFK G
Sbjct: 2    GEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKPG 61

Query: 1080 ERIGIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEVQY 901
            ERI IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNE+QY
Sbjct: 62   ERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQY 121

Query: 900  GLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNAD 721
            GLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA+LKVDKLATGHNAD
Sbjct: 122  GLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNAD 181

Query: 720  DIAETVLLNILRGDIARLGRCTSIVTGEDGPIPRCKPFKYTYEKEIVM------------ 577
            DIAETVLLNILRGDIARL RCTSI+TGEDGPIPRCKPFKYTYEKEIV+            
Sbjct: 182  DIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVIYPYSFLQNLNRI 241

Query: 576  --YAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGESFRISNQTKM 403
              YAYFK+LDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDII+SGE FRIS   KM
Sbjct: 242  YTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAKM 301

Query: 402  PEQGTCERCGYISSQKWCKACVLLEGLNRGLPRLGIGRTRGL-NGHMTGVEKADGAQSIQ 226
            PEQGTCERCGYISSQKWCKACVLLEGLNRGLP+LGIGRTRGL NG     ++++G ++IQ
Sbjct: 302  PEQGTCERCGYISSQKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNIQ 361

Query: 225  SKQCGTLDF 199
            SKQCGTLDF
Sbjct: 362  SKQCGTLDF 370


>ref|NP_181956.2| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
            gi|226711456|sp|O64862.2|CTU1_ARATH RecName:
            Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
            Full=Cytoplasmic tRNA adenylyltransferase 1
            gi|26449617|dbj|BAC41934.1| unknown protein [Arabidopsis
            thaliana] gi|30725380|gb|AAP37712.1| At2g44270
            [Arabidopsis thaliana] gi|330255305|gb|AEC10399.1|
            cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis
            thaliana]
          Length = 355

 Score =  632 bits (1629), Expect = e-178
 Identities = 307/354 (86%), Positives = 323/354 (91%), Gaps = 2/354 (0%)
 Frame = -1

Query: 1254 EAAKPKKTGGRQCSICNQRRPALKRPKTLEQICRECFYAVFEDEIHKVIVDNKLFKSGER 1075
            EA   K    R C +CN RRP LKRPKTL+QICRECFY VFE+EIH+VIV N+LFKSGER
Sbjct: 2    EAKNKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGER 61

Query: 1074 IGIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEVQYGL 895
            + IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLS+DEGITGYRDDSLETVKRNEVQYGL
Sbjct: 62   VAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGL 121

Query: 894  PLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDI 715
            PLK+VSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKV+KL TGHNADDI
Sbjct: 122  PLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDI 181

Query: 714  AETVLLNILRGDIARLGRCTSIVTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC 535
            AETVLLNILRGDIARL RCTSI TGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC
Sbjct: 182  AETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC 241

Query: 534  IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGESFRISNQTKMPEQGTCERCGYISSQK 355
            IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGE FRI+  TKMPEQGTCERCGYISSQK
Sbjct: 242  IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQK 301

Query: 354  WCKACVLLEGLNRGLPRLGIGRTRGLNGHMTGVEKADG--AQSIQSKQCGTLDF 199
            WCKACVLLEGLNRGLP++GIGR RG+NG      K  G  A+SI+SKQCG+LDF
Sbjct: 302  WCKACVLLEGLNRGLPKMGIGRPRGVNGDHNKETKKPGSVAKSIESKQCGSLDF 355


>ref|XP_002881955.1| hypothetical protein ARALYDRAFT_483552 [Arabidopsis lyrata subsp.
            lyrata] gi|297327794|gb|EFH58214.1| hypothetical protein
            ARALYDRAFT_483552 [Arabidopsis lyrata subsp. lyrata]
          Length = 355

 Score =  631 bits (1627), Expect = e-178
 Identities = 307/354 (86%), Positives = 323/354 (91%), Gaps = 2/354 (0%)
 Frame = -1

Query: 1254 EAAKPKKTGGRQCSICNQRRPALKRPKTLEQICRECFYAVFEDEIHKVIVDNKLFKSGER 1075
            EA   K    R C +CN RRP LKRPKTL+QICRECFY VFE+EIH+VIV N+LFKSGER
Sbjct: 2    EAKSKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGER 61

Query: 1074 IGIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEVQYGL 895
            + IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLS+DEGITGYRDDSLETVKRNEVQYGL
Sbjct: 62   VAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGL 121

Query: 894  PLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDI 715
            PL++VSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKL TGHNADDI
Sbjct: 122  PLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDI 181

Query: 714  AETVLLNILRGDIARLGRCTSIVTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC 535
            AETVLLNILRGDIARL RCTSI TGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC
Sbjct: 182  AETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTEC 241

Query: 534  IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGESFRISNQTKMPEQGTCERCGYISSQK 355
            IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGE FRI+  TKMPEQGTCERCGYISSQK
Sbjct: 242  IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQK 301

Query: 354  WCKACVLLEGLNRGLPRLGIGRTRGLNGHMTGVEKADG--AQSIQSKQCGTLDF 199
            WCKACVLLEGLNRGLP++GIGR RG+NG      K  G  A+SI+SKQCG+LDF
Sbjct: 302  WCKACVLLEGLNRGLPKMGIGRPRGVNGDHKMETKKPGSVAKSIESKQCGSLDF 355