BLASTX nr result

ID: Coptis21_contig00003860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003860
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275709.1| PREDICTED: transmembrane protein 115 [Vitis ...   380   e-103
ref|XP_002533249.1| Transmembrane protein, putative [Ricinus com...   365   2e-98
ref|XP_002316359.1| hypothetical protein POPTRDRAFT_659857 [Popu...   359   8e-97
ref|XP_004143801.1| PREDICTED: transmembrane protein 115-like [C...   358   1e-96
ref|XP_002311100.1| predicted protein [Populus trichocarpa] gi|2...   353   6e-95

>ref|XP_002275709.1| PREDICTED: transmembrane protein 115 [Vitis vinifera]
            gi|296086036|emb|CBI31477.3| unnamed protein product
            [Vitis vinifera]
          Length = 311

 Score =  380 bits (976), Expect = e-103
 Identities = 189/296 (63%), Positives = 222/296 (75%)
 Frame = +3

Query: 249  TRLSKGLAVVIIGGSVLLQIFPPAVSYLTLIPARTIPFAWNLITAGYIEQSLIGMVTSTL 428
            TRL KGLAVVI+GG V++Q FP AV+YL LIPARTIPFAWNLIT+GYIEQ++ G V ST+
Sbjct: 17   TRLCKGLAVVIVGGHVVVQFFPSAVAYLALIPARTIPFAWNLITSGYIEQTIYGTVVSTV 76

Query: 429  GLLFMGRLLEPIWGSREFLKFILVVNFLTSVCVFVTAIALYYITMQETYLYTPXXXXXXX 608
            GLLF+G+LLEPIWG+REFLKFI VVNFLTSVCVF+TAIALYYIT QE YLY P       
Sbjct: 77   GLLFLGKLLEPIWGTREFLKFIFVVNFLTSVCVFITAIALYYITRQENYLYMPLSGFHGV 136

Query: 609  XXXXXXXIKQILPDQEFSIFPQLKIKTKWMPSLMLLLAIAVSFFSTEAASNLPTLTFGTY 788
                   IKQI+PDQE S+F  LKI+ +W+PSLMLLL+IA+SFF+TE+A+ LP L FGTY
Sbjct: 137  LSGFLVGIKQIIPDQELSLFSLLKIRARWLPSLMLLLSIAISFFTTESAAYLPALIFGTY 196

Query: 789  MSWIYLRYLQSKPETALRGDPSDEFAFSTFFPTFLRPLIDPVASVFDRLLCGRSRFSDDA 968
            M WIYLRYLQ KPET L+GDPSDEFAFSTFFP FLRP+IDP+ SVF RL CGR   SD+ 
Sbjct: 197  MGWIYLRYLQRKPETRLKGDPSDEFAFSTFFPEFLRPVIDPIGSVFGRLCCGRFEISDED 256

Query: 969  NGYTLGSAPLPGSDPVXXXXXXXXXXXXXXXXXXXXKLVPGSNTEELSHSDAADNV 1136
             G+TLG APLPGSDP+                    +L  G + +E S  DA ++V
Sbjct: 257  RGHTLGGAPLPGSDPIEASRRRERGARALEERLAVERLTAGESAKE-SGRDAVEDV 311


>ref|XP_002533249.1| Transmembrane protein, putative [Ricinus communis]
            gi|223526929|gb|EEF29134.1| Transmembrane protein,
            putative [Ricinus communis]
          Length = 308

 Score =  365 bits (936), Expect = 2e-98
 Identities = 180/296 (60%), Positives = 221/296 (74%)
 Frame = +3

Query: 249  TRLSKGLAVVIIGGSVLLQIFPPAVSYLTLIPARTIPFAWNLITAGYIEQSLIGMVTSTL 428
            TRL KGLAVV++ G +++QI P ++SYL LIPA+TIPF WNLITAGYIEQS+ G+V STL
Sbjct: 17   TRLCKGLAVVLVAGHLIVQILPSSLSYLALIPAKTIPFGWNLITAGYIEQSIYGVVVSTL 76

Query: 429  GLLFMGRLLEPIWGSREFLKFILVVNFLTSVCVFVTAIALYYITMQETYLYTPXXXXXXX 608
             LL MG+LLEP+WGS+EFLKFI +VNFLTSVCVF+TAIALYYIT QE YLY P       
Sbjct: 77   CLLIMGKLLEPVWGSKEFLKFIFIVNFLTSVCVFITAIALYYITTQENYLYMPISGFQGV 136

Query: 609  XXXXXXXIKQILPDQEFSIFPQLKIKTKWMPSLMLLLAIAVSFFSTEAASNLPTLTFGTY 788
                   +KQI+PDQE S+   L+IK KW+PSL LLL+IAVSFF+ E+ + LPT+ FGTY
Sbjct: 137  LSGFLVGMKQIIPDQELSV---LRIKAKWLPSLALLLSIAVSFFTPESVTYLPTIIFGTY 193

Query: 789  MSWIYLRYLQSKPETALRGDPSDEFAFSTFFPTFLRPLIDPVASVFDRLLCGRSRFSDDA 968
            +SWIYLRYLQ KPET LRGDP+D+FAFSTFFP FLRP+IDP+AS+F R+LCGRS  S +A
Sbjct: 194  LSWIYLRYLQRKPETKLRGDPNDDFAFSTFFPEFLRPVIDPIASIFHRMLCGRSETSTEA 253

Query: 969  NGYTLGSAPLPGSDPVXXXXXXXXXXXXXXXXXXXXKLVPGSNTEELSHSDAADNV 1136
             GYTLG APLPGSDP+                    +L    ++++L   DA++NV
Sbjct: 254  QGYTLGGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSSDDLK-KDASENV 308


>ref|XP_002316359.1| hypothetical protein POPTRDRAFT_659857 [Populus trichocarpa]
            gi|222865399|gb|EEF02530.1| hypothetical protein
            POPTRDRAFT_659857 [Populus trichocarpa]
          Length = 275

 Score =  359 bits (922), Expect = 8e-97
 Identities = 171/256 (66%), Positives = 206/256 (80%)
 Frame = +3

Query: 249  TRLSKGLAVVIIGGSVLLQIFPPAVSYLTLIPARTIPFAWNLITAGYIEQSLIGMVTSTL 428
            T+L KGLAVV++ G +++QIFP AV+YL LIPARTIPFAWNL+TAGYIEQS+ G+V STL
Sbjct: 17   TKLCKGLAVVLVAGHIVVQIFPSAVNYLALIPARTIPFAWNLLTAGYIEQSIYGVVASTL 76

Query: 429  GLLFMGRLLEPIWGSREFLKFILVVNFLTSVCVFVTAIALYYITMQETYLYTPXXXXXXX 608
             LL MG+LLEP+WGS+EFLKFI +VNFLTSVCVF+TAI+LYYIT QE YLY P       
Sbjct: 77   CLLIMGKLLEPVWGSKEFLKFIFIVNFLTSVCVFITAISLYYITRQENYLYMPISGFQGI 136

Query: 609  XXXXXXXIKQILPDQEFSIFPQLKIKTKWMPSLMLLLAIAVSFFSTEAASNLPTLTFGTY 788
                    KQI+PDQE S+   L++K KW PSLMLL+AI +SFF+ E+A  LPT+ FGTY
Sbjct: 137  LAGFLVGTKQIIPDQELSL---LRLKAKWFPSLMLLIAIVISFFTAESAKYLPTIIFGTY 193

Query: 789  MSWIYLRYLQSKPETALRGDPSDEFAFSTFFPTFLRPLIDPVASVFDRLLCGRSRFSDDA 968
            MSWIYLRY   KPET LRGDPSD+FAFS+FFP FLRP+IDP+AS+F R+LCGR   S +A
Sbjct: 194  MSWIYLRYFHRKPETKLRGDPSDDFAFSSFFPEFLRPVIDPIASIFHRMLCGRFETSTEA 253

Query: 969  NGYTLGSAPLPGSDPV 1016
            +G+TLG APLPGSDP+
Sbjct: 254  HGHTLGGAPLPGSDPI 269


>ref|XP_004143801.1| PREDICTED: transmembrane protein 115-like [Cucumis sativus]
            gi|449529888|ref|XP_004171930.1| PREDICTED: transmembrane
            protein 115-like [Cucumis sativus]
          Length = 308

 Score =  358 bits (920), Expect = 1e-96
 Identities = 179/296 (60%), Positives = 218/296 (73%)
 Frame = +3

Query: 249  TRLSKGLAVVIIGGSVLLQIFPPAVSYLTLIPARTIPFAWNLITAGYIEQSLIGMVTSTL 428
            T+L KG+AVV+IGG +L+Q+FP  V+YL LIPARTIPFAWNL+TAGYIEQS+ G+V ST+
Sbjct: 17   TKLCKGIAVVLIGGHILVQLFPVVVNYLALIPARTIPFAWNLLTAGYIEQSIYGVVVSTV 76

Query: 429  GLLFMGRLLEPIWGSREFLKFILVVNFLTSVCVFVTAIALYYITMQETYLYTPXXXXXXX 608
            GLLF+G+LLEPIWGSREFLKFI VVNFLTS+CVF+TAIALYYIT +E+YLY P       
Sbjct: 77   GLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGI 136

Query: 609  XXXXXXXIKQILPDQEFSIFPQLKIKTKWMPSLMLLLAIAVSFFSTEAASNLPTLTFGTY 788
                   IKQ++PDQE    P LK+K KW+PSL +LL+IAVSF++T AA+ LPT+ FGTY
Sbjct: 137  LAGFLVGIKQMIPDQE---LPVLKLKAKWLPSLAVLLSIAVSFWTTGAATYLPTIIFGTY 193

Query: 789  MSWIYLRYLQSKPETALRGDPSDEFAFSTFFPTFLRPLIDPVASVFDRLLCGRSRFSDDA 968
            +SWIYLRY Q KPE  L+GDPSD+FAFSTFFP  LRP+IDP+AS+F R+LCGRS   D+A
Sbjct: 194  ISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFHRMLCGRSESPDNA 253

Query: 969  NGYTLGSAPLPGSDPVXXXXXXXXXXXXXXXXXXXXKLVPGSNTEELSHSDAADNV 1136
              YT   APLPGSDPV                    +L    + +E S  DA +NV
Sbjct: 254  EDYTAAGAPLPGSDPVEASRRRERGARALEERLAAERLAAARSAQE-SGKDATENV 308


>ref|XP_002311100.1| predicted protein [Populus trichocarpa] gi|222850920|gb|EEE88467.1|
            predicted protein [Populus trichocarpa]
          Length = 275

 Score =  353 bits (906), Expect = 6e-95
 Identities = 172/256 (67%), Positives = 204/256 (79%)
 Frame = +3

Query: 249  TRLSKGLAVVIIGGSVLLQIFPPAVSYLTLIPARTIPFAWNLITAGYIEQSLIGMVTSTL 428
            T+L KGLAVV++   +L+QI PPAV+YL LIPARTIPF WNLITAGYIEQS+ G+V STL
Sbjct: 17   TKLCKGLAVVLVTCHILVQILPPAVNYLALIPARTIPFVWNLITAGYIEQSIYGVVASTL 76

Query: 429  GLLFMGRLLEPIWGSREFLKFILVVNFLTSVCVFVTAIALYYITMQETYLYTPXXXXXXX 608
             LL MG+LLEP+WGS+EFLKFI +VNFL S+CVF+TAI+LYYIT QE YLY P       
Sbjct: 77   CLLIMGKLLEPVWGSKEFLKFIFIVNFLISICVFITAISLYYITRQENYLYMPISGFQGI 136

Query: 609  XXXXXXXIKQILPDQEFSIFPQLKIKTKWMPSLMLLLAIAVSFFSTEAASNLPTLTFGTY 788
                   IKQI+PDQE S+   L+IK KW PSLMLL+AIA+SFF+ E+A+ LPTL FGTY
Sbjct: 137  LAGFLVGIKQIIPDQELSL---LRIKAKWFPSLMLLIAIAISFFTAESAAYLPTLIFGTY 193

Query: 789  MSWIYLRYLQSKPETALRGDPSDEFAFSTFFPTFLRPLIDPVASVFDRLLCGRSRFSDDA 968
            MSWIYLRY Q KPET LRGDPSD+FAFS+FFP  LRP+IDP+AS+F R+LCGR   S +A
Sbjct: 194  MSWIYLRYFQRKPETKLRGDPSDDFAFSSFFPESLRPIIDPIASIFHRMLCGRFETSTEA 253

Query: 969  NGYTLGSAPLPGSDPV 1016
            +G TLG A LPGSDP+
Sbjct: 254  HGDTLGDASLPGSDPI 269


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