BLASTX nr result

ID: Coptis21_contig00003856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003856
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321404.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_002516668.1| transcription factor, putative [Ricinus comm...    99   6e-19
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247...    99   1e-18
emb|CBI23011.3| unnamed protein product [Vitis vinifera]               99   1e-18
ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...    97   2e-18

>ref|XP_002321404.1| predicted protein [Populus trichocarpa] gi|222868400|gb|EEF05531.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score =  100 bits (249), Expect = 3e-19
 Identities = 42/53 (79%), Positives = 49/53 (92%)
 Frame = +2

Query: 533 VIHPIHDQTFFLDEKHKKQLENEFDVEPWTFEQYFGDAIFIPAGCPQQVRNRQ 691
           VIHPIHDQTF+L EKHK+QL+ EF+VEPWTFEQ+ G+A+FIPAGCP QVRNRQ
Sbjct: 594 VIHPIHDQTFYLSEKHKRQLKEEFNVEPWTFEQHLGEAVFIPAGCPHQVRNRQ 646


>ref|XP_002516668.1| transcription factor, putative [Ricinus communis]
           gi|223544163|gb|EEF45687.1| transcription factor,
           putative [Ricinus communis]
          Length = 939

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 41/53 (77%), Positives = 49/53 (92%)
 Frame = +2

Query: 533 VIHPIHDQTFFLDEKHKKQLENEFDVEPWTFEQYFGDAIFIPAGCPQQVRNRQ 691
           VIHPIHDQTF+L+E+HK+QL+ EF VEPWTFEQ+ G+A+FIPAGCP QVRNRQ
Sbjct: 816 VIHPIHDQTFYLNERHKRQLKEEFSVEPWTFEQHLGEAVFIPAGCPHQVRNRQ 868


>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
          Length = 1876

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 41/53 (77%), Positives = 48/53 (90%)
 Frame = +2

Query: 533  VIHPIHDQTFFLDEKHKKQLENEFDVEPWTFEQYFGDAIFIPAGCPQQVRNRQ 691
            VIHPIHDQT +L E+HKKQL+ E++VEPWTFEQY G+A+FIPAGCP QVRNRQ
Sbjct: 1721 VIHPIHDQTLYLTERHKKQLKEEYNVEPWTFEQYLGEAVFIPAGCPHQVRNRQ 1773


>emb|CBI23011.3| unnamed protein product [Vitis vinifera]
          Length = 1904

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 41/53 (77%), Positives = 48/53 (90%)
 Frame = +2

Query: 533  VIHPIHDQTFFLDEKHKKQLENEFDVEPWTFEQYFGDAIFIPAGCPQQVRNRQ 691
            VIHPIHDQT +L E+HKKQL+ E++VEPWTFEQY G+A+FIPAGCP QVRNRQ
Sbjct: 1788 VIHPIHDQTLYLTERHKKQLKEEYNVEPWTFEQYLGEAVFIPAGCPHQVRNRQ 1840


>ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 2-like [Cucumis sativus]
          Length = 1761

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
 Frame = +2

Query: 311 LSKEMEMDLIKQYSQKNCNCQVDRIFADRIRQGG*DDVTPEYLVKWQGLSYVEATWENDV 490
           +SKEM++DLIKQ      N QV+R+ ADRI + G  DV PEYLVKWQGLSY EATWE DV
Sbjct: 524 VSKEMDLDLIKQ------NSQVERVIADRISKDGSGDVVPEYLVKWQGLSYAEATWEKDV 577

Query: 491 DNIAFAQNAIDEYKVIH---PIHDQTFFLDEKHKKQLENEFDVEP 616
           D I+FAQ+AIDEYK       +  ++  L  K  K    + D +P
Sbjct: 578 D-ISFAQDAIDEYKAREAAISVQGKSVDLQRKKSKVSLRKLDEQP 621


Top