BLASTX nr result
ID: Coptis21_contig00003856
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003856 (692 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321404.1| predicted protein [Populus trichocarpa] gi|2... 100 3e-19 ref|XP_002516668.1| transcription factor, putative [Ricinus comm... 99 6e-19 ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247... 99 1e-18 emb|CBI23011.3| unnamed protein product [Vitis vinifera] 99 1e-18 ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain... 97 2e-18 >ref|XP_002321404.1| predicted protein [Populus trichocarpa] gi|222868400|gb|EEF05531.1| predicted protein [Populus trichocarpa] Length = 717 Score = 100 bits (249), Expect = 3e-19 Identities = 42/53 (79%), Positives = 49/53 (92%) Frame = +2 Query: 533 VIHPIHDQTFFLDEKHKKQLENEFDVEPWTFEQYFGDAIFIPAGCPQQVRNRQ 691 VIHPIHDQTF+L EKHK+QL+ EF+VEPWTFEQ+ G+A+FIPAGCP QVRNRQ Sbjct: 594 VIHPIHDQTFYLSEKHKRQLKEEFNVEPWTFEQHLGEAVFIPAGCPHQVRNRQ 646 >ref|XP_002516668.1| transcription factor, putative [Ricinus communis] gi|223544163|gb|EEF45687.1| transcription factor, putative [Ricinus communis] Length = 939 Score = 99.4 bits (246), Expect = 6e-19 Identities = 41/53 (77%), Positives = 49/53 (92%) Frame = +2 Query: 533 VIHPIHDQTFFLDEKHKKQLENEFDVEPWTFEQYFGDAIFIPAGCPQQVRNRQ 691 VIHPIHDQTF+L+E+HK+QL+ EF VEPWTFEQ+ G+A+FIPAGCP QVRNRQ Sbjct: 816 VIHPIHDQTFYLNERHKRQLKEEFSVEPWTFEQHLGEAVFIPAGCPHQVRNRQ 868 >ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera] Length = 1876 Score = 98.6 bits (244), Expect = 1e-18 Identities = 41/53 (77%), Positives = 48/53 (90%) Frame = +2 Query: 533 VIHPIHDQTFFLDEKHKKQLENEFDVEPWTFEQYFGDAIFIPAGCPQQVRNRQ 691 VIHPIHDQT +L E+HKKQL+ E++VEPWTFEQY G+A+FIPAGCP QVRNRQ Sbjct: 1721 VIHPIHDQTLYLTERHKKQLKEEYNVEPWTFEQYLGEAVFIPAGCPHQVRNRQ 1773 >emb|CBI23011.3| unnamed protein product [Vitis vinifera] Length = 1904 Score = 98.6 bits (244), Expect = 1e-18 Identities = 41/53 (77%), Positives = 48/53 (90%) Frame = +2 Query: 533 VIHPIHDQTFFLDEKHKKQLENEFDVEPWTFEQYFGDAIFIPAGCPQQVRNRQ 691 VIHPIHDQT +L E+HKKQL+ E++VEPWTFEQY G+A+FIPAGCP QVRNRQ Sbjct: 1788 VIHPIHDQTLYLTERHKKQLKEEYNVEPWTFEQYLGEAVFIPAGCPHQVRNRQ 1840 >ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2-like [Cucumis sativus] Length = 1761 Score = 97.4 bits (241), Expect = 2e-18 Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 3/105 (2%) Frame = +2 Query: 311 LSKEMEMDLIKQYSQKNCNCQVDRIFADRIRQGG*DDVTPEYLVKWQGLSYVEATWENDV 490 +SKEM++DLIKQ N QV+R+ ADRI + G DV PEYLVKWQGLSY EATWE DV Sbjct: 524 VSKEMDLDLIKQ------NSQVERVIADRISKDGSGDVVPEYLVKWQGLSYAEATWEKDV 577 Query: 491 DNIAFAQNAIDEYKVIH---PIHDQTFFLDEKHKKQLENEFDVEP 616 D I+FAQ+AIDEYK + ++ L K K + D +P Sbjct: 578 D-ISFAQDAIDEYKAREAAISVQGKSVDLQRKKSKVSLRKLDEQP 621