BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003853
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-18
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    93   4e-17
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    92   7e-17
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    91   2e-16
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    86   9e-15

>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 14/155 (9%)
 Frame = -2

Query: 606 FSAYSYILESSGDLLVVLRNI-VLEEDQSTSLKEGQRWP----------YKTVGFKVLKL 460
           +++  Y++ESSG +L+V+R I    +++   L EG              Y+T+ F + ++
Sbjct: 308 YTSRLYLVESSGGVLLVVRRIGEFVDEEGRVLHEGDLLTDKAAEPLVCAYRTLLFGLFRM 367

Query: 459 DFGEPNKWVEIQSLGNRSLFVGQNXXXXXXXXXXSGCKPNCIYFTDHFWSYFKEQG-FGG 283
           DF +   WV + SL ++++FVG N           GC+ N +YFTD +W    E   +GG
Sbjct: 368 DF-DKETWVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDYWERMNEDYLYGG 426

Query: 282 HDYGIFNLED--AKLLYPSDTHMIMPPPIWFTPNP 184
           HD G+FNL+D   K  Y  D   I PPP WF PNP
Sbjct: 427 HDMGVFNLKDKSVKHFYQLDALKIQPPPCWFLPNP 461


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
 Frame = -2

Query: 591 YILESSGDLLVVLRNIVL----EEDQSTSLKEGQRWPYKTVGFKVLKLDFGEPNKWVEIQ 424
           Y++ES  +LL+V R + L    E DQ++ +       Y+T  F+V +LD   P +W  + 
Sbjct: 255 YLVESGEELLLVTRYLDLTYDVEPDQTSLI-------YRTTRFQVCRLDLKAP-RWEVVS 306

Query: 423 SLGNRSLFVGQNXXXXXXXXXXSGCKPNCIYFTDHFWSYFKEQGFGG-HDYGIFNLEDAK 247
           SLG+R+LF+G+N           GCK NCIY+TD + S     G GG  D GIFNLED  
Sbjct: 307 SLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDY-SEDNYDGIGGEQDLGIFNLEDGS 365

Query: 246 L--LYPSDTHMIMPPPIWFTPNP 184
           +  L  S   +  PPP+W TPNP
Sbjct: 366 IEPLPCSHFRIRWPPPLWVTPNP 388


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
 Frame = -2

Query: 591 YILESSGDLLVVLRNIVL----EEDQSTSLKEGQRWPYKTVGFKVLKLDFGEPNKWVEIQ 424
           Y++ES  +LL+V R + L    E DQ++ +       Y+T  F+V +LD   P +W  + 
Sbjct: 255 YLVESGEELLLVTRYLDLTYDVEXDQTSLI-------YRTTRFQVCRLDSKAP-RWEVVS 306

Query: 423 SLGNRSLFVGQNXXXXXXXXXXSGCKPNCIYFTDHFWSYFKEQGFGG-HDYGIFNLEDAK 247
           SLG+R+LF+G+N           GCK NCIY+TD + S     G GG  D GIFNLED  
Sbjct: 307 SLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDY-SEDNYDGIGGEQDLGIFNLEDGS 365

Query: 246 L--LYPSDTHMIMPPPIWFTPNP 184
           +  L  S   +  PPP+W TPNP
Sbjct: 366 IEPLPCSHFRIRWPPPLWVTPNP 388


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
 Frame = -2

Query: 669 AGEGTHPYAEEVIGGHPSRVEFSAYSYILESSGDLLVVLRNIVLEEDQSTSLKEGQRWPY 490
           AGEG  P    +I             Y + S+GD+L+++R  VL++D S    E     Y
Sbjct: 228 AGEGCFPPRVSIIQTTTPFGFAGDIHYAVFSAGDMLLLIR--VLDQDFSDHAGEESDLVY 285

Query: 489 KTVGFKVLKLDFGEPNKWVEIQSLGNRSLFVGQNXXXXXXXXXXSGCKPNCIYFTDHFWS 310
           +TVGF+V K+++G    W  +++LG R LFVG N           GC  +CIYFTD +  
Sbjct: 286 RTVGFEVFKMNWGLLT-WQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSE 344

Query: 309 YFKEQGFGGHDYGIFNLEDAKLLYP-------SDTHMIMPPPIWFTPNP 184
              +   G HD G+F L D K + P       S + +  P PIW +PNP
Sbjct: 345 SNDDDACGKHDLGVFRLRD-KSIEPLPCFNQNSCSRLRWPLPIWVSPNP 392


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
 Frame = -2

Query: 591 YILESSGDLLVVLRNIVLEEDQSTSLKEGQRWPYKTVGFKVLKLDFGEPNKWVEIQSLGN 412
           Y++ S   LL+V R + L+ +    +       YKT  F+V KLD   P +W  + SLG+
Sbjct: 259 YLVSSGDGLLLVTRYLDLDVEFDIFI-------YKTARFEVFKLDLNGP-RWERVTSLGD 310

Query: 411 RSLFVGQNXXXXXXXXXXSGCKPNCIYFTDHFWSYFKEQGFGGHDYGIFNLEDAKL---- 244
             LF+G+N          SGC  +CIY+TD + +   +   G HD GIF L D  +    
Sbjct: 311 MMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLP 370

Query: 243 LYPSDTH--MIMPPPIWFTPNP 184
            YP +++  +  PPP+W +PNP
Sbjct: 371 CYPRNSYSRLQWPPPLWISPNP 392