BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003839
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi...   216   1e-54
ref|XP_002319140.1| predicted protein [Populus trichocarpa] gi|2...   210   1e-52
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   210   1e-52
ref|XP_002525469.1| pentatricopeptide repeat-containing protein,...   206   2e-51
ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49

>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Vitis vinifera]
          Length = 566

 Score =  216 bits (551), Expect = 1e-54
 Identities = 102/126 (80%), Positives = 112/126 (88%)
 Frame = +3

Query: 3   LIKPLCKGHRVEEAKVVFDEMLQKGFSPTIRTYHAFFGILKTGEEVFELLEKMKNAGCHP 182
           LIKPL +  ++ EAK VFDEMLQ+G SPTIRTYHAFF ILK+GEEVF LLEKMK  GCHP
Sbjct: 366 LIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAFFRILKSGEEVFMLLEKMKETGCHP 425

Query: 183 VNDTYIMLIRKFCRWRQIENVFKLWSEMSENGLSPDRSSYIVLIHGLFLNGKLEEAWKYY 362
             DTYIMLIR+FCRWRQ++NVFKLWSEMSENG+ PDRSSYIVLIHGLFLNGKLEEA+KYY
Sbjct: 426 DKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLEEAYKYY 485

Query: 363 EEMKEK 380
            EMKEK
Sbjct: 486 IEMKEK 491


>ref|XP_002319140.1| predicted protein [Populus trichocarpa] gi|222857516|gb|EEE95063.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  210 bits (534), Expect = 1e-52
 Identities = 98/126 (77%), Positives = 110/126 (87%)
 Frame = +3

Query: 3   LIKPLCKGHRVEEAKVVFDEMLQKGFSPTIRTYHAFFGILKTGEEVFELLEKMKNAGCHP 182
           LIKPLC+  +VEEAK  FD+ML++  SPTIRTYHAF  IL+TGEEVF LLEKM+  GC P
Sbjct: 86  LIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVFALLEKMRKMGCQP 145

Query: 183 VNDTYIMLIRKFCRWRQIENVFKLWSEMSENGLSPDRSSYIVLIHGLFLNGKLEEAWKYY 362
           +NDTYIMLIRKFCRWRQ+ENVFKLW EMSENG+SPDRSSYIVLIHGLFLNG+L+ A KYY
Sbjct: 146 INDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYY 205

Query: 363 EEMKEK 380
            EMKEK
Sbjct: 206 TEMKEK 211


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  210 bits (534), Expect = 1e-52
 Identities = 98/126 (77%), Positives = 110/126 (87%)
 Frame = +3

Query: 3   LIKPLCKGHRVEEAKVVFDEMLQKGFSPTIRTYHAFFGILKTGEEVFELLEKMKNAGCHP 182
           LIKPLC+  +VEEAK  FD+ML++  SPTIRTYHAF  IL+TGEEVF LLEKM+  GC P
Sbjct: 308 LIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVFALLEKMRKMGCQP 367

Query: 183 VNDTYIMLIRKFCRWRQIENVFKLWSEMSENGLSPDRSSYIVLIHGLFLNGKLEEAWKYY 362
           +NDTYIMLIRKFCRWRQ+ENVFKLW EMSENG+SPDRSSYIVLIHGLFLNG+L+ A KYY
Sbjct: 368 INDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYY 427

Query: 363 EEMKEK 380
            EMKEK
Sbjct: 428 TEMKEK 433


>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  206 bits (523), Expect = 2e-51
 Identities = 94/126 (74%), Positives = 110/126 (87%)
 Frame = +3

Query: 3   LIKPLCKGHRVEEAKVVFDEMLQKGFSPTIRTYHAFFGILKTGEEVFELLEKMKNAGCHP 182
           LIKPLC+  +++EA+ +FDEMLQ G SPTIRTYHAFF  L+TGEEVF LLE M+  GCHP
Sbjct: 380 LIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFFRSLRTGEEVFALLENMRKLGCHP 439

Query: 183 VNDTYIMLIRKFCRWRQIENVFKLWSEMSENGLSPDRSSYIVLIHGLFLNGKLEEAWKYY 362
             DTYIMLIRKFCRWRQ ++VFKLW+++SENGL PDRSSYIVLIHGLFLNGKLEEA+K+Y
Sbjct: 440 TIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFY 499

Query: 363 EEMKEK 380
            +MKEK
Sbjct: 500 ADMKEK 505


>ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
           gi|449477985|ref|XP_004155184.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
          Length = 485

 Score =  199 bits (505), Expect = 3e-49
 Identities = 90/126 (71%), Positives = 108/126 (85%)
 Frame = +3

Query: 3   LIKPLCKGHRVEEAKVVFDEMLQKGFSPTIRTYHAFFGILKTGEEVFELLEKMKNAGCHP 182
           +IKPLCK  R +EA+ VF+E+LQ+G  PTI+TYHAF   L+T EE+FELL+KM+  GC+P
Sbjct: 295 VIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHAFLRFLRTEEEIFELLKKMRTMGCNP 354

Query: 183 VNDTYIMLIRKFCRWRQIENVFKLWSEMSENGLSPDRSSYIVLIHGLFLNGKLEEAWKYY 362
             DTYIMLIRKFCRWRQ++NV ++W EMSENG+SPDRSSYIVLIHGLFLNGKLE+A KYY
Sbjct: 355 TTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAHKYY 414

Query: 363 EEMKEK 380
            EMKEK
Sbjct: 415 LEMKEK 420