BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003836
         (1261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24211.3| unnamed protein product [Vitis vinifera]              263   e-122
ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxido...   263   e-122
ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersi...   262   e-119
ref|XP_002516715.1| Phytochromobilin:ferredoxin oxidoreductase, ...   253   e-115
ref|XP_002313368.1| predicted protein [Populus trichocarpa] gi|2...   243   e-113

>emb|CBI24211.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  263 bits (672), Expect(2) = e-122
 Identities = 118/156 (75%), Positives = 140/156 (89%)
 Frame = -1

Query: 619 LLPWGGKLTSESLRFFSPIVIWTKFTSSEHNHESLFSAFMDYYKAWLELMDQAGEEKDDS 440
           LLPWGGKLTSESLRFFSPIVIWTKFTSS++ H  L+SAFMDYYKAWLELM+QA EE+D S
Sbjct: 223 LLPWGGKLTSESLRFFSPIVIWTKFTSSQYKHGVLYSAFMDYYKAWLELMEQAAEERDTS 282

Query: 439 QILLNCEAQHKYLTWRAEKDPGHQVLKKLVGETVAKDIVSNFLFNGINTLGSKTFLDYFP 260
           QI+ N EAQH+YLTWRAEKDPGH++LKKL+GE+++KD+V +FLFNG++ LG+KTFLDYFP
Sbjct: 283 QIICNREAQHRYLTWRAEKDPGHRILKKLIGESLSKDLVRSFLFNGVDELGTKTFLDYFP 342

Query: 259 EYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGDDP 152
           EY CE+G IN KRS+IGKSF+SRPWD  GEF+G  P
Sbjct: 343 EYCCENGTINDKRSIIGKSFESRPWDTSGEFIGSLP 378



 Score =  204 bits (519), Expect(2) = e-122
 Identities = 95/138 (68%), Positives = 121/138 (87%)
 Frame = -2

Query: 1104 KRSSMKIASFSYKKFVHFALEETQKHTHLVPSPLQEQYSCMKSMDGKSELQMLSFQAPKI 925
            K + +++++ SY+KF+HFAL+ET++ THL+PSPLQE ++ M +MDGK++LQM+SFQAPKI
Sbjct: 85   KGALVEVSACSYQKFLHFALDETKRRTHLLPSPLQENFNSMMAMDGKAKLQMVSFQAPKI 144

Query: 924  RYLRSLSIEGSEAMKVLDFAVFPEPELDLPIFCANFFTAGSMNIIVLDLNPLHDVIIQKD 745
            R LR+LSIE SE M++LDFAVFPE E DLPIFCANFFT  + NIIVLDLNPLHDVI ++D
Sbjct: 145  RLLRNLSIEASEGMQILDFAVFPEQEFDLPIFCANFFTTPTTNIIVLDLNPLHDVINRRD 204

Query: 744  YREKYYRSLMPLGLKYTE 691
            Y+EKYY+SLMPLGLKY E
Sbjct: 205  YKEKYYKSLMPLGLKYAE 222


>ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxidoreductase,
           chloroplastic-like [Vitis vinifera]
          Length = 330

 Score =  263 bits (672), Expect(2) = e-122
 Identities = 118/156 (75%), Positives = 140/156 (89%)
 Frame = -1

Query: 619 LLPWGGKLTSESLRFFSPIVIWTKFTSSEHNHESLFSAFMDYYKAWLELMDQAGEEKDDS 440
           LLPWGGKLTSESLRFFSPIVIWTKFTSS++ H  L+SAFMDYYKAWLELM+QA EE+D S
Sbjct: 166 LLPWGGKLTSESLRFFSPIVIWTKFTSSQYKHGVLYSAFMDYYKAWLELMEQAAEERDTS 225

Query: 439 QILLNCEAQHKYLTWRAEKDPGHQVLKKLVGETVAKDIVSNFLFNGINTLGSKTFLDYFP 260
           QI+ N EAQH+YLTWRAEKDPGH++LKKL+GE+++KD+V +FLFNG++ LG+KTFLDYFP
Sbjct: 226 QIICNREAQHRYLTWRAEKDPGHRILKKLIGESLSKDLVRSFLFNGVDELGTKTFLDYFP 285

Query: 259 EYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGDDP 152
           EY CE+G IN KRS+IGKSF+SRPWD  GEF+G  P
Sbjct: 286 EYCCENGTINDKRSIIGKSFESRPWDTSGEFIGSLP 321



 Score =  204 bits (519), Expect(2) = e-122
 Identities = 95/138 (68%), Positives = 121/138 (87%)
 Frame = -2

Query: 1104 KRSSMKIASFSYKKFVHFALEETQKHTHLVPSPLQEQYSCMKSMDGKSELQMLSFQAPKI 925
            K + +++++ SY+KF+HFAL+ET++ THL+PSPLQE ++ M +MDGK++LQM+SFQAPKI
Sbjct: 28   KGALVEVSACSYQKFLHFALDETKRRTHLLPSPLQENFNSMMAMDGKAKLQMVSFQAPKI 87

Query: 924  RYLRSLSIEGSEAMKVLDFAVFPEPELDLPIFCANFFTAGSMNIIVLDLNPLHDVIIQKD 745
            R LR+LSIE SE M++LDFAVFPE E DLPIFCANFFT  + NIIVLDLNPLHDVI ++D
Sbjct: 88   RLLRNLSIEASEGMQILDFAVFPEQEFDLPIFCANFFTTPTTNIIVLDLNPLHDVINRRD 147

Query: 744  YREKYYRSLMPLGLKYTE 691
            Y+EKYY+SLMPLGLKY E
Sbjct: 148  YKEKYYKSLMPLGLKYAE 165


>ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersicum]
           gi|62149356|dbj|BAD93478.1| phytochromobilin synthase
           [Solanum lycopersicum] gi|62149358|dbj|BAD93479.1|
           phytochromobilin synthase [Solanum lycopersicum]
          Length = 342

 Score =  262 bits (669), Expect(2) = e-119
 Identities = 116/154 (75%), Positives = 138/154 (89%)
 Frame = -1

Query: 619 LLPWGGKLTSESLRFFSPIVIWTKFTSSEHNHESLFSAFMDYYKAWLELMDQAGEEKDDS 440
           LLPWGGKLTSESLRFFSPIVIWT+F+SS HNH  LFSAF DYY+AWL LMD++  E D S
Sbjct: 184 LLPWGGKLTSESLRFFSPIVIWTRFSSSPHNHSVLFSAFKDYYQAWLGLMDRSEGETDAS 243

Query: 439 QILLNCEAQHKYLTWRAEKDPGHQVLKKLVGETVAKDIVSNFLFNGINTLGSKTFLDYFP 260
           QI  NCEAQH+YLTWR+EKDPGH VLK+L+GE +AKD+++ FLFNG+N LG+KTFLDYFP
Sbjct: 244 QIACNCEAQHRYLTWRSEKDPGHGVLKRLIGEDLAKDVITKFLFNGVNELGNKTFLDYFP 303

Query: 259 EYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGD 158
           EYRCEDGK+N+KRS+IGKSF++RPW+A GEF+GD
Sbjct: 304 EYRCEDGKVNEKRSMIGKSFENRPWNARGEFIGD 337



 Score =  192 bits (489), Expect(2) = e-119
 Identities = 97/155 (62%), Positives = 117/155 (75%)
 Frame = -2

Query: 1155 QSFPSFGLKMEPRTLPKKRSSMKIASFSYKKFVHFALEETQKHTHLVPSPLQEQYSCMKS 976
            +SF   G K    +  +  SS      SYKK +HFALEET  HT L PSPLQE+YS + S
Sbjct: 33   RSFNEVGSKCVRMSYTENESS----GVSYKKLIHFALEETNTHTLLSPSPLQEKYSSLLS 88

Query: 975  MDGKSELQMLSFQAPKIRYLRSLSIEGSEAMKVLDFAVFPEPELDLPIFCANFFTAGSMN 796
            MD K+ELQMLSF+A KIR LRSL IEG++ M+VLDFA FP+PE DLPIFCANFFT   MN
Sbjct: 89   MDDKTELQMLSFEAHKIRLLRSLCIEGTDGMQVLDFAAFPKPEFDLPIFCANFFTTAKMN 148

Query: 795  IIVLDLNPLHDVIIQKDYREKYYRSLMPLGLKYTE 691
            IIVLDLNPLHD++ Q+DY+EKYY+ L+ LGLKY++
Sbjct: 149  IIVLDLNPLHDIMDQEDYKEKYYKDLITLGLKYSK 183


>ref|XP_002516715.1| Phytochromobilin:ferredoxin oxidoreductase, chloroplast precursor,
           putative [Ricinus communis] gi|223544210|gb|EEF45734.1|
           Phytochromobilin:ferredoxin oxidoreductase, chloroplast
           precursor, putative [Ricinus communis]
          Length = 330

 Score =  253 bits (647), Expect(2) = e-115
 Identities = 114/155 (73%), Positives = 136/155 (87%)
 Frame = -1

Query: 619 LLPWGGKLTSESLRFFSPIVIWTKFTSSEHNHESLFSAFMDYYKAWLELMDQAGEEKDDS 440
           L PWGGKLTSESL+FFSPIV+WTKFTSS+  H+ L+SAF DYYK WL+L++QA EE D S
Sbjct: 173 LFPWGGKLTSESLQFFSPIVLWTKFTSSQSKHDDLYSAFADYYKVWLQLIEQAVEETDIS 232

Query: 439 QILLNCEAQHKYLTWRAEKDPGHQVLKKLVGETVAKDIVSNFLFNGINTLGSKTFLDYFP 260
           QI+ N EAQHKYLTWRAEKDPGH VLKKL+GE++AKD+V NFLFNG++ LGSK FLDYFP
Sbjct: 233 QIICNREAQHKYLTWRAEKDPGHGVLKKLIGESLAKDLVRNFLFNGLDELGSKGFLDYFP 292

Query: 259 EYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGDD 155
           +YRC+DG IN+KRSVIGKSF+ RPWD  GEF+G++
Sbjct: 293 QYRCKDGNINEKRSVIGKSFEMRPWDINGEFIGNN 327



 Score =  188 bits (478), Expect(2) = e-115
 Identities = 96/170 (56%), Positives = 131/170 (77%)
 Frame = -2

Query: 1200 F*ALSEKPAMETLLFQSFPSFGLKMEPRTLPKKRSSMKIASFSYKKFVHFALEETQKHTH 1021
            F +LS   +++  L  SF +  + +  R    K   +++++ SY+KF+HFA+ ET++HT 
Sbjct: 5    FCSLSSSLSLKPQLLTSFITT-INVSWRIKKIKPHVLQVSAHSYQKFIHFAVSETKRHTS 63

Query: 1020 LVPSPLQEQYSCMKSMDGKSELQMLSFQAPKIRYLRSLSIEGSEAMKVLDFAVFPEPELD 841
            LVPSPLQE+YS M ++D ++EL+M SFQ+PKIR LR+L+IE +EAM+VLDF V P PE D
Sbjct: 64   LVPSPLQEKYSSMTAVDCRTELKMQSFQSPKIRLLRTLNIE-NEAMQVLDFTVLPRPEFD 122

Query: 840  LPIFCANFFTAGSMNIIVLDLNPLHDVIIQKDYREKYYRSLMPLGLKYTE 691
            +PIFCANFFTA SMNIIVLDLNPLH+VI + DY+EKYY+SL+ +GLKY E
Sbjct: 123  VPIFCANFFTAASMNIIVLDLNPLHNVIDRSDYKEKYYKSLLTVGLKYVE 172


>ref|XP_002313368.1| predicted protein [Populus trichocarpa] gi|222849776|gb|EEE87323.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  243 bits (620), Expect(2) = e-113
 Identities = 111/153 (72%), Positives = 131/153 (85%)
 Frame = -1

Query: 619 LLPWGGKLTSESLRFFSPIVIWTKFTSSEHNHESLFSAFMDYYKAWLELMDQAGEEKDDS 440
           L PWGGKLTSESL+FFSPIVIWTKF  S+ ++++L+SAF +YYKAWLEL+DQA EE D S
Sbjct: 148 LFPWGGKLTSESLKFFSPIVIWTKFPPSQDSYDALYSAFTEYYKAWLELIDQAPEEIDAS 207

Query: 439 QILLNCEAQHKYLTWRAEKDPGHQVLKKLVGETVAKDIVSNFLFNGINTLGSKTFLDYFP 260
            I  N EAQHKYLTWR EKDPGH +LK+L+GE +AKD+V NFLFNG++ LGSK FLDYFP
Sbjct: 208 HITFNREAQHKYLTWREEKDPGHGILKRLIGERLAKDLVRNFLFNGLDELGSKGFLDYFP 267

Query: 259 EYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVG 161
           EYR EDG IN+KRS+IGKSF+ RPWDA GEF+G
Sbjct: 268 EYRREDGSINEKRSIIGKSFEKRPWDARGEFIG 300



 Score =  194 bits (492), Expect(2) = e-113
 Identities = 94/138 (68%), Positives = 115/138 (83%)
 Frame = -2

Query: 1110 PKKRSSMKIASFSYKKFVHFALEETQKHTHLVPSPLQEQYSCMKSMDGKSELQMLSFQAP 931
            P +   +   SFSY KF+HFAL ET++H  LVPSPLQE+YS M +MDG +ELQMLSFQAP
Sbjct: 9    PHRVLKVSAGSFSYHKFIHFALNETKRHALLVPSPLQEKYSSMTAMDGTTELQMLSFQAP 68

Query: 930  KIRYLRSLSIEGSEAMKVLDFAVFPEPELDLPIFCANFFTAGSMNIIVLDLNPLHDVIIQ 751
            KIR LRSLSIE +EAM++LDFAVF  PE D+PIFCANFF+  ++NIIVLDLNPLH+VI Q
Sbjct: 69   KIRLLRSLSIE-NEAMQILDFAVFARPEFDVPIFCANFFSTATINIIVLDLNPLHNVIDQ 127

Query: 750  KDYREKYYRSLMPLGLKY 697
            +DY+EKY++ L+PLGLKY
Sbjct: 128  RDYKEKYFKRLIPLGLKY 145