BLASTX nr result
ID: Coptis21_contig00003833
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003833 (821 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot... 397 e-108 gb|ABK95931.1| unknown [Populus trichocarpa] 389 e-106 gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanu... 375 e-102 gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tubero... 375 e-102 gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum t... 375 e-102 >ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1 [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed protein product [Vitis vinifera] Length = 449 Score = 397 bits (1020), Expect = e-108 Identities = 198/204 (97%), Positives = 199/204 (97%) Frame = +1 Query: 208 GQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEFVDL 387 GQ QFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF+DL Sbjct: 5 GQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEFLDL 64 Query: 388 NQAIQMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSGGDVAGNVLLVTIEGVEAGDV 567 NQAI MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLLVTIEGVEAGDV Sbjct: 65 NQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVEAGDV 124 Query: 568 SIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLPEHV 747 SIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLPEHV Sbjct: 125 SIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLPEHV 184 Query: 748 GSCHLRISYSAHTDLNIKFQSHRS 819 GSCHLRISYSAHTDLNIKFQSHRS Sbjct: 185 GSCHLRISYSAHTDLNIKFQSHRS 208 Score = 91.7 bits (226), Expect = 2e-16 Identities = 52/99 (52%), Positives = 64/99 (64%) Frame = +1 Query: 523 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 702 NVLL +IE ++ V++DV+H VFSAFG V KIA FEK G QALIQ+ D TA+ A+ A Sbjct: 243 NVLLASIENMQYA-VTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEA 301 Query: 703 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRS 819 L+G I G C L +SYS HTDLN+K S RS Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVKAHSDRS 334 >gb|ABK95931.1| unknown [Populus trichocarpa] Length = 473 Score = 389 bits (999), Expect = e-106 Identities = 192/204 (94%), Positives = 198/204 (97%) Frame = +1 Query: 208 GQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEFVDL 387 GQ QFRYTQTPSKVLHLRNLPWECTEEEL+ELCKPFG+IVNTKCNVGANRNQAFVEFVD Sbjct: 5 GQPQFRYTQTPSKVLHLRNLPWECTEEELIELCKPFGRIVNTKCNVGANRNQAFVEFVDQ 64 Query: 388 NQAIQMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSGGDVAGNVLLVTIEGVEAGDV 567 NQAIQMVSYYASSS+PAQVRGKTVYIQYSNR EIVNNKS GD GNVLLVTIEGVEAGDV Sbjct: 65 NQAIQMVSYYASSSDPAQVRGKTVYIQYSNRHEIVNNKSPGDNPGNVLLVTIEGVEAGDV 124 Query: 568 SIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLPEHV 747 SIDVIHLVFSAFG++HKIATFEKAAGFQALIQFTD+ETASSARNALDGRSIPRYLLPEHV Sbjct: 125 SIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNALDGRSIPRYLLPEHV 184 Query: 748 GSCHLRISYSAHTDLNIKFQSHRS 819 GSCHLRISYSAHTDLNIKFQSHRS Sbjct: 185 GSCHLRISYSAHTDLNIKFQSHRS 208 Score = 88.2 bits (217), Expect = 2e-15 Identities = 51/99 (51%), Positives = 63/99 (63%) Frame = +1 Query: 523 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 702 NVLL +IE ++ V+IDV+H VFSAFG V KIA FEK G QALIQ+ D TA+ A+ Sbjct: 243 NVLLASIENMQYA-VTIDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKET 301 Query: 703 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRS 819 L+G I G C L +SYS HTDLN+K S +S Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVKAYSDKS 334 >gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum] Length = 442 Score = 375 bits (963), Expect = e-102 Identities = 186/204 (91%), Positives = 192/204 (94%) Frame = +1 Query: 208 GQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEFVDL 387 GQ QFRYTQTPSKVLHLRNLPW+C++EELVELCKPFGKIVNTKCNVGANRNQAFVEF DL Sbjct: 5 GQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEFADL 64 Query: 388 NQAIQMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSGGDVAGNVLLVTIEGVEAGDV 567 NQAI MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLLVTIEGVEAGDV Sbjct: 65 NQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEAGDV 124 Query: 568 SIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLPEHV 747 SIDVIHLVFSAFGFV KIATFEKAAGFQALIQF+D TAS+AR ALDGRSIP+YLLPEHV Sbjct: 125 SIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHV 184 Query: 748 GSCHLRISYSAHTDLNIKFQSHRS 819 CHLRISYSAHTDLNIKFQSHRS Sbjct: 185 NHCHLRISYSAHTDLNIKFQSHRS 208 Score = 79.0 bits (193), Expect = 1e-12 Identities = 45/99 (45%), Positives = 63/99 (63%) Frame = +1 Query: 523 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 702 NVL ++E ++ V++DV++ VFSAFG V KIA FEK QALIQ+ D A++A++A Sbjct: 243 NVLFASLENMQYA-VTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301 Query: 703 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRS 819 L+G I G C L +SYS HTDLN++ S +S Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVQAYSDKS 334 >gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tuberosum] Length = 437 Score = 375 bits (963), Expect = e-102 Identities = 186/204 (91%), Positives = 192/204 (94%) Frame = +1 Query: 208 GQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEFVDL 387 GQ QFRYTQTPSKVLHLRNLPW+C++EELVELCKPFGKIVNTKCNVGANRNQAFVEF DL Sbjct: 5 GQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEFADL 64 Query: 388 NQAIQMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSGGDVAGNVLLVTIEGVEAGDV 567 NQAI MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLLVTIEGVEAGDV Sbjct: 65 NQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEAGDV 124 Query: 568 SIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLPEHV 747 SIDVIHLVFSAFGFV KIATFEKAAGFQALIQF+D TAS+AR ALDGRSIP+YLLPEHV Sbjct: 125 SIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHV 184 Query: 748 GSCHLRISYSAHTDLNIKFQSHRS 819 CHLRISYSAHTDLNIKFQSHRS Sbjct: 185 NHCHLRISYSAHTDLNIKFQSHRS 208 Score = 79.0 bits (193), Expect = 1e-12 Identities = 45/99 (45%), Positives = 63/99 (63%) Frame = +1 Query: 523 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 702 NVL ++E ++ V++DV++ VFSAFG V KIA FEK QALIQ+ D A++A++A Sbjct: 243 NVLFASLENMQYA-VTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301 Query: 703 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRS 819 L+G I G C L +SYS HTDLN++ S +S Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVQAYSDKS 334 >gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum tuberosum] Length = 467 Score = 375 bits (963), Expect = e-102 Identities = 186/204 (91%), Positives = 192/204 (94%) Frame = +1 Query: 208 GQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEFVDL 387 GQ QFRYTQTPSKVLHLRNLPW+C++EELVELCKPFGKIVNTKCNVGANRNQAFVEF DL Sbjct: 5 GQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEFADL 64 Query: 388 NQAIQMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSGGDVAGNVLLVTIEGVEAGDV 567 NQAI MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLLVTIEGVEAGDV Sbjct: 65 NQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEAGDV 124 Query: 568 SIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLPEHV 747 SIDVIHLVFSAFGFV KIATFEKAAGFQALIQF+D TAS+AR ALDGRSIP+YLLPEHV Sbjct: 125 SIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHV 184 Query: 748 GSCHLRISYSAHTDLNIKFQSHRS 819 CHLRISYSAHTDLNIKFQSHRS Sbjct: 185 NHCHLRISYSAHTDLNIKFQSHRS 208 Score = 79.0 bits (193), Expect = 1e-12 Identities = 45/99 (45%), Positives = 63/99 (63%) Frame = +1 Query: 523 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 702 NVL ++E ++ V++DV++ VFSAFG V KIA FEK QALIQ+ D A++A++A Sbjct: 243 NVLFASLENMQYA-VTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301 Query: 703 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRS 819 L+G I G C L +SYS HTDLN++ S +S Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVQAYSDKS 334