BLASTX nr result

ID: Coptis21_contig00003832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003832
         (1929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329568.1| predicted protein [Populus trichocarpa] gi|1...   825   0.0  
ref|XP_002281297.1| PREDICTED: AP-2 complex subunit mu [Vitis vi...   820   0.0  
ref|XP_004148486.1| PREDICTED: AP-2 complex subunit mu-like [Cuc...   819   0.0  
ref|XP_002326715.1| predicted protein [Populus trichocarpa] gi|2...   813   0.0  
ref|XP_003524713.1| PREDICTED: AP-2 complex subunit mu-like [Gly...   812   0.0  

>ref|XP_002329568.1| predicted protein [Populus trichocarpa] gi|118485142|gb|ABK94434.1|
            unknown [Populus trichocarpa] gi|222870277|gb|EEF07408.1|
            predicted protein [Populus trichocarpa]
          Length = 438

 Score =  825 bits (2130), Expect = 0.0
 Identities = 413/438 (94%), Positives = 419/438 (95%)
 Frame = -3

Query: 1750 MPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY 1571
            MPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY
Sbjct: 1    MPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY 60

Query: 1570 MRXXXXXXXXXXXXXXXXXXAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 1391
            MR                  AFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM
Sbjct: 61   MRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 120

Query: 1390 DFGYPQNLSPEILKLYITQEGVRSPFSSKPTDKPVPNATLQVTGAVGWRREGLVYKKNEV 1211
            DFGYPQNLSPEILKLYITQEGVRSPFSSKPTDKPVPNATLQVTGAVGWRREGLVYKKNEV
Sbjct: 121  DFGYPQNLSPEILKLYITQEGVRSPFSSKPTDKPVPNATLQVTGAVGWRREGLVYKKNEV 180

Query: 1210 FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPT 1031
            FLDIVESVNLLMSSKG+VLRCDVTGK+LMKCFLSGMPDLKLGLNDKIGLEKESQLKSRP 
Sbjct: 181  FLDIVESVNLLMSSKGNVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPA 240

Query: 1030 KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 851
            KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE
Sbjct: 241  KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 300

Query: 850  LGRTRMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTAGRAKYNASIDCLVWKI 671
            LGRTRMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVT+GRAKYNA+IDC+VWKI
Sbjct: 301  LGRTRMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNAAIDCIVWKI 360

Query: 670  RKFPGQTEPTMSAEVELISTIAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 491
            RKFPGQTEPTMSAEVELIST+AEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN
Sbjct: 361  RKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 420

Query: 490  TVEWVRYITKAGSYEIRC 437
            TVEWVRYITKAGSYEIRC
Sbjct: 421  TVEWVRYITKAGSYEIRC 438


>ref|XP_002281297.1| PREDICTED: AP-2 complex subunit mu [Vitis vinifera]
            gi|297742129|emb|CBI33916.3| unnamed protein product
            [Vitis vinifera]
          Length = 438

 Score =  820 bits (2119), Expect = 0.0
 Identities = 411/438 (93%), Positives = 417/438 (95%)
 Frame = -3

Query: 1750 MPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY 1571
            MPVAASA+YFLNLRGDVLINRLYRDDVGGNMVDAFR HIMQTKELGTCPVRQIGGCSFFY
Sbjct: 1    MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFFY 60

Query: 1570 MRXXXXXXXXXXXXXXXXXXAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 1391
            MR                  AFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM
Sbjct: 61   MRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 120

Query: 1390 DFGYPQNLSPEILKLYITQEGVRSPFSSKPTDKPVPNATLQVTGAVGWRREGLVYKKNEV 1211
            DFGYPQNLSPEILKLYITQEGVRSPFSSKP+DKPVPNATLQVTGAVGWRREGLVYKKNEV
Sbjct: 121  DFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRREGLVYKKNEV 180

Query: 1210 FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPT 1031
            FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRP 
Sbjct: 181  FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPA 240

Query: 1030 KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 851
            KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE
Sbjct: 241  KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 300

Query: 850  LGRTRMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTAGRAKYNASIDCLVWKI 671
            LGRTRMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVT+GRAKYNA+ DCL+WKI
Sbjct: 301  LGRTRMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNAATDCLIWKI 360

Query: 670  RKFPGQTEPTMSAEVELISTIAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 491
            RKFPGQTEPTMSAEVELIST+AEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN
Sbjct: 361  RKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 420

Query: 490  TVEWVRYITKAGSYEIRC 437
            TVEWVRYITKAGSYEIRC
Sbjct: 421  TVEWVRYITKAGSYEIRC 438


>ref|XP_004148486.1| PREDICTED: AP-2 complex subunit mu-like [Cucumis sativus]
          Length = 438

 Score =  819 bits (2115), Expect = 0.0
 Identities = 410/438 (93%), Positives = 416/438 (94%)
 Frame = -3

Query: 1750 MPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY 1571
            MPVAASA+YFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY
Sbjct: 1    MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY 60

Query: 1570 MRXXXXXXXXXXXXXXXXXXAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 1391
            MR                  AFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM
Sbjct: 61   MRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 120

Query: 1390 DFGYPQNLSPEILKLYITQEGVRSPFSSKPTDKPVPNATLQVTGAVGWRREGLVYKKNEV 1211
            DFGYPQNLSPEILKLYITQEGVRSPFSSKP+DKPVPNATLQVTGAVGWRREGLVYKKNEV
Sbjct: 121  DFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRREGLVYKKNEV 180

Query: 1210 FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPT 1031
            FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRP 
Sbjct: 181  FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPA 240

Query: 1030 KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 851
            KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE
Sbjct: 241  KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 300

Query: 850  LGRTRMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTAGRAKYNASIDCLVWKI 671
            LGRT MEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVT+GRAKYNASIDC+VWKI
Sbjct: 301  LGRTHMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCIVWKI 360

Query: 670  RKFPGQTEPTMSAEVELISTIAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 491
            RKFPGQTEPTMSAEVELIST+ E+K WTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN
Sbjct: 361  RKFPGQTEPTMSAEVELISTMTERKPWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 420

Query: 490  TVEWVRYITKAGSYEIRC 437
            TVEWVRYITKAGSYEIRC
Sbjct: 421  TVEWVRYITKAGSYEIRC 438


>ref|XP_002326715.1| predicted protein [Populus trichocarpa] gi|222834037|gb|EEE72514.1|
            predicted protein [Populus trichocarpa]
          Length = 438

 Score =  813 bits (2100), Expect = 0.0
 Identities = 408/438 (93%), Positives = 416/438 (94%)
 Frame = -3

Query: 1750 MPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY 1571
            MPVAASA+YFLNLRGDVLINRLYRDDVGGNMVDAFR HIMQTKELGTCPVRQIGGCSFFY
Sbjct: 1    MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRLHIMQTKELGTCPVRQIGGCSFFY 60

Query: 1570 MRXXXXXXXXXXXXXXXXXXAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 1391
            MR                  AFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM
Sbjct: 61   MRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 120

Query: 1390 DFGYPQNLSPEILKLYITQEGVRSPFSSKPTDKPVPNATLQVTGAVGWRREGLVYKKNEV 1211
            DFGYPQNLSPEILKLYITQEGVRSPFSSKPTD PVPNATLQVTGAVGWRREGLVYKKNEV
Sbjct: 121  DFGYPQNLSPEILKLYITQEGVRSPFSSKPTDIPVPNATLQVTGAVGWRREGLVYKKNEV 180

Query: 1210 FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPT 1031
            FLDIVESVNLLMSSKG+ LRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSR T
Sbjct: 181  FLDIVESVNLLMSSKGNGLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRAT 240

Query: 1030 KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 851
            KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE
Sbjct: 241  KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 300

Query: 850  LGRTRMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTAGRAKYNASIDCLVWKI 671
            LGRTRMEVNVKVKSV+GAKMFALGVVIKIPVPKQTAKTSFQVT+GRAKYNA+IDC+VWKI
Sbjct: 301  LGRTRMEVNVKVKSVYGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNAAIDCIVWKI 360

Query: 670  RKFPGQTEPTMSAEVELISTIAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 491
            RKFPGQTEPTMSAEVELIST+AEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN
Sbjct: 361  RKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 420

Query: 490  TVEWVRYITKAGSYEIRC 437
            TV+WVRYITKAGSYEIRC
Sbjct: 421  TVDWVRYITKAGSYEIRC 438


>ref|XP_003524713.1| PREDICTED: AP-2 complex subunit mu-like [Glycine max]
          Length = 438

 Score =  812 bits (2097), Expect = 0.0
 Identities = 405/438 (92%), Positives = 417/438 (95%)
 Frame = -3

Query: 1750 MPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY 1571
            MPVAASA+YFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY
Sbjct: 1    MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFY 60

Query: 1570 MRXXXXXXXXXXXXXXXXXXAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 1391
            MR                  AFKFVVEAVALF+SYFGGAFDEDAIRNNFVLIYELLDEIM
Sbjct: 61   MRISNVYIVIVVSNNANVACAFKFVVEAVALFRSYFGGAFDEDAIRNNFVLIYELLDEIM 120

Query: 1390 DFGYPQNLSPEILKLYITQEGVRSPFSSKPTDKPVPNATLQVTGAVGWRREGLVYKKNEV 1211
            DFGYPQNLSPEILKLYITQEGVRSPFSSKPTD+PVPNATLQVTGAVGWRREGLVYKKNEV
Sbjct: 121  DFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEV 180

Query: 1210 FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPT 1031
            FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKE+QLKSRPT
Sbjct: 181  FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKEAQLKSRPT 240

Query: 1030 KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 851
            KSGK+IELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPF+VLPTIKE
Sbjct: 241  KSGKSIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKE 300

Query: 850  LGRTRMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTAGRAKYNASIDCLVWKI 671
            LGR+R+EVNVKVKSVFGAKMFALGVV+KIPVPKQTAKT+F VT+GRAKYNASIDCLVWKI
Sbjct: 301  LGRSRIEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFTVTSGRAKYNASIDCLVWKI 360

Query: 670  RKFPGQTEPTMSAEVELISTIAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 491
            RKFPGQTE T+SAEVELISTI EKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN
Sbjct: 361  RKFPGQTESTLSAEVELISTITEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 420

Query: 490  TVEWVRYITKAGSYEIRC 437
            TVEWVRYITKAGSYEIRC
Sbjct: 421  TVEWVRYITKAGSYEIRC 438


Top