BLASTX nr result

ID: Coptis21_contig00003828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003828
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270993.1| PREDICTED: uncharacterized protein LOC100254...   168   1e-39
ref|XP_002270956.1| PREDICTED: uncharacterized protein LOC100259...   163   4e-38
ref|XP_002302567.1| predicted protein [Populus trichocarpa] gi|2...   160   4e-37
ref|NP_001152568.1| thioesterase family protein [Zea mays] gi|19...   159   8e-37
ref|XP_002511811.1| acyl-CoA thioesterase, putative [Ricinus com...   154   4e-35

>ref|XP_002270993.1| PREDICTED: uncharacterized protein LOC100254026 [Vitis vinifera]
           gi|296089053|emb|CBI38756.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score =  168 bits (426), Expect = 1e-39
 Identities = 80/146 (54%), Positives = 111/146 (76%), Gaps = 2/146 (1%)
 Frame = -3

Query: 781 FFKHLGLSANLPESSKKDDAYTDMIRGVLKVEKVERGKITCVLTVKPPLLNFLGSLHGGA 602
           FF+H+G++A+LP + ++ D Y+ +IRG+L+V++VERG +TC+  V P + N+ G LHGGA
Sbjct: 31  FFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVPAVANYYGGLHGGA 90

Query: 601 IAAVAELVSVACVKSVV--DKELFLGELATSYFSAAFVNDELEVGGFVVRYGRNVTITSV 428
           +A + ELVS+AC ++VV  DKELFLGEL+ SY SAA    E+     VVR GRNVT+ +V
Sbjct: 91  VAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAEVVTDASVVRSGRNVTVIAV 150

Query: 427 EFRTKETKKLVYTARATFYNMPVANL 350
           EF+ K+T KL+YT RATFYNMP+A L
Sbjct: 151 EFKMKKTSKLIYTGRATFYNMPIAKL 176


>ref|XP_002270956.1| PREDICTED: uncharacterized protein LOC100259154 [Vitis vinifera]
           gi|296089052|emb|CBI38755.3| unnamed protein product
           [Vitis vinifera]
          Length = 178

 Score =  163 bits (413), Expect = 4e-38
 Identities = 87/169 (51%), Positives = 117/169 (69%), Gaps = 2/169 (1%)
 Frame = -3

Query: 850 TRARMAAPPPNPTTPSWITPLNSFFKHLGLSANLPESSKKDDAYTDMIRGVLKVEKVERG 671
           T A + +  P P     I     FF+   L++ +     + D Y+ +I  +L+V+ VERG
Sbjct: 14  TAATVWSDVPEPNRSRTI----DFFERQALASPVAADCLRKDFYSRLILSLLEVDSVERG 69

Query: 670 KITCVLTVKPPLLNFLGSLHGGAIAAVAELVSVACVKSVV--DKELFLGELATSYFSAAF 497
           +ITC+++VKP ++N+ G LHGGA+AA+AELVS+AC ++VV  DKELFLGEL  SY SAA 
Sbjct: 70  RITCLVSVKPAVINYFGGLHGGAVAAIAELVSIACARTVVAEDKELFLGELGMSYLSAAP 129

Query: 496 VNDELEVGGFVVRYGRNVTITSVEFRTKETKKLVYTARATFYNMPVANL 350
            N EL V   VVR GRNVT+ +VEF+ +ET +LVYTARATFYNMP+A L
Sbjct: 130 KNAELTVDASVVRSGRNVTVIAVEFKMRETSQLVYTARATFYNMPMAKL 178


>ref|XP_002302567.1| predicted protein [Populus trichocarpa] gi|222844293|gb|EEE81840.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  160 bits (405), Expect = 4e-37
 Identities = 78/153 (50%), Positives = 112/153 (73%), Gaps = 2/153 (1%)
 Frame = -3

Query: 802 WITPLNSFFKHLGLSANLPESSKKDDAYTDMIRGVLKVEKVERGKITCVLTVKPPLLNFL 623
           +++ +  FF  +G+ A+LP++S   D Y+D+IR +LKV+ V RG+++C+ +V P L N+ 
Sbjct: 22  YVSAVKGFFADVGIHASLPQNSFSKDFYSDLIRDLLKVDNVLRGRVSCIFSVSPALGNYF 81

Query: 622 GSLHGGAIAAVAELVSVACVKSVV--DKELFLGELATSYFSAAFVNDELEVGGFVVRYGR 449
             LHGGA+ A+AE VS+AC ++VV  DKELFLGEL+ SY SAA +N+ L V   V R GR
Sbjct: 82  NGLHGGAVGAIAERVSIACARTVVAGDKELFLGELSISYLSAATLNEVLVVEAAVARSGR 141

Query: 448 NVTITSVEFRTKETKKLVYTARATFYNMPVANL 350
           N+T+ + EFR K+T+KLVYT+RAT Y+MP A L
Sbjct: 142 NLTVVASEFRIKKTRKLVYTSRATIYHMPPAKL 174


>ref|NP_001152568.1| thioesterase family protein [Zea mays] gi|195657597|gb|ACG48266.1|
           thioesterase family protein [Zea mays]
           gi|414884502|tpg|DAA60516.1| TPA: thioesterase family
           protein [Zea mays]
          Length = 168

 Score =  159 bits (402), Expect = 8e-37
 Identities = 78/167 (46%), Positives = 114/167 (68%), Gaps = 7/167 (4%)
 Frame = -3

Query: 829 PPPNPTTPSWITPLNS------FFKHLGLSANLPESSKKDDAYTDMIRGVLKVEKVERGK 668
           PPP P  P  ++P  S      FF  LG+   LP S+++ DAYT ++R ++    V   +
Sbjct: 2   PPPPPVNPQRLSPAESRERTLYFFHGLGVDVPLPVSAERPDAYTSLVRAIVSSAAVTSSR 61

Query: 667 ITCVLTVKPPLLNFLGSLHGGAIAAVAELVSVACVKSVV-DKELFLGELATSYFSAAFVN 491
           ++C LTV P + N   +LHGGA+AAVAE V +AC ++   DKE+FLGEL+T+Y +AA +N
Sbjct: 62  VSCTLTVSPAVANQYNTLHGGAVAAVAEAVGMACARAAAGDKEMFLGELSTAYLAAARLN 121

Query: 490 DELEVGGFVVRYGRNVTITSVEFRTKETKKLVYTARATFYNMPVANL 350
            E++V   ++R GR+V +T+++FR K+TKKL YT+RATFY MPVA+L
Sbjct: 122 SEVDVEAQILRKGRSVVVTTIDFRLKDTKKLCYTSRATFYIMPVASL 168


>ref|XP_002511811.1| acyl-CoA thioesterase, putative [Ricinus communis]
           gi|223548991|gb|EEF50480.1| acyl-CoA thioesterase,
           putative [Ricinus communis]
          Length = 180

 Score =  154 bits (388), Expect = 4e-35
 Identities = 72/152 (47%), Positives = 114/152 (75%), Gaps = 2/152 (1%)
 Frame = -3

Query: 799 ITPLNSFFKHLGLSANLPESSKKDDAYTDMIRGVLKVEKVERGKITCVLTVKPPLLNFLG 620
           +  ++ FF  +G+++ +P++ + +D Y++++  +LK + V+RG+I+C  +V P + N+ G
Sbjct: 29  VDKIHGFFTDVGVTSCIPKNKQSEDFYSNILSNLLKADHVQRGRISCSFSVLPFVANYFG 88

Query: 619 SLHGGAIAAVAELVSVACVKSVV--DKELFLGELATSYFSAAFVNDELEVGGFVVRYGRN 446
            LHGGA+AA+AE V++AC ++VV  DKE+FLGEL+ SY SAA  N+EL V   V+R G+N
Sbjct: 89  GLHGGALAAIAERVAIACARTVVAEDKEIFLGELSLSYLSAAPKNEELVVDSSVLRSGKN 148

Query: 445 VTITSVEFRTKETKKLVYTARATFYNMPVANL 350
           +T+ ++EF+ K+T KL +TARATFYNMPVA L
Sbjct: 149 LTVVAMEFKIKKTGKLAFTARATFYNMPVAKL 180


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