BLASTX nr result

ID: Coptis21_contig00003826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003826
         (1561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283746.1| PREDICTED: uncharacterized protein LOC100260...   194   7e-47
ref|XP_002532850.1| nucleic acid binding protein, putative [Rici...   191   5e-46
gb|AEW69816.1| Hop-interacting protein THI119 [Solanum lycopersi...   189   2e-45
ref|XP_002326700.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-44
ref|XP_002881020.1| hypothetical protein ARALYDRAFT_481806 [Arab...   185   2e-44

>ref|XP_002283746.1| PREDICTED: uncharacterized protein LOC100260322 [Vitis vinifera]
          Length = 328

 Score =  194 bits (492), Expect = 7e-47
 Identities = 107/172 (62%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
 Frame = +3

Query: 87  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDEXXXXXXXXXXXXXXXXX 266
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD+                 
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDAKNSSQPKSSNSEPEAE 60

Query: 267 XXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCRNFLSLKED--KDPAAIE 440
               YASFQGLLALARITGSNADE RGACKKCGRVGHLTFQCRNFLS+K+D  KDP AI+
Sbjct: 61  NA--YASFQGLLALARITGSNADETRGACKKCGRVGHLTFQCRNFLSIKDDKEKDPDAIQ 118

Query: 441 AAVANGLEKLKAS-GVRIGKKGXXXXXXXXXXXXXXXXXXXXXXXXIERIIA 593
           A+V +GL+KLK + G ++  KG                        IERIIA
Sbjct: 119 ASVLSGLDKLKGNVGKKVNGKGAVEDESESEEEDESESSDSDADSEIERIIA 170


>ref|XP_002532850.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527387|gb|EEF29528.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 321

 Score =  191 bits (485), Expect = 5e-46
 Identities = 99/135 (73%), Positives = 106/135 (78%), Gaps = 4/135 (2%)
 Frame = +3

Query: 87  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDEXXXXXXXXXXXXXXXXX 266
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD+                 
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDAKSSSQQKSTSNNASEP 60

Query: 267 XXXX-YASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCRNFLSLKED---KDPAA 434
                YASFQGLLALARITGSNADEARGACK+CGRVGHL FQCRNFLS+K+D   KDP A
Sbjct: 61  EAENAYASFQGLLALARITGSNADEARGACKRCGRVGHLAFQCRNFLSIKDDSKEKDPDA 120

Query: 435 IEAAVANGLEKLKAS 479
           I+AAV +GLEK+K S
Sbjct: 121 IQAAVLSGLEKIKGS 135


>gb|AEW69816.1| Hop-interacting protein THI119 [Solanum lycopersicum]
          Length = 327

 Score =  189 bits (480), Expect = 2e-45
 Identities = 99/141 (70%), Positives = 108/141 (76%), Gaps = 3/141 (2%)
 Frame = +3

Query: 87  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDEXXXXXXXXXXXXXXXXX 266
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP+KDE                 
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPSKDEDKKSSNQKPSSAADPEN 60

Query: 267 XXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCRNFLSLKE---DKDPAAI 437
               YASFQGLLALARITGSNADE RGACK+CGRVGHLTFQCRNF+S+K+   DKD  AI
Sbjct: 61  A---YASFQGLLALARITGSNADETRGACKRCGRVGHLTFQCRNFVSVKDDNKDKDAEAI 117

Query: 438 EAAVANGLEKLKASGVRIGKK 500
           EAAV +GLEK+K  G ++  K
Sbjct: 118 EAAVLSGLEKIKGHGSKMKGK 138


>ref|XP_002326700.1| predicted protein [Populus trichocarpa] gi|222834022|gb|EEE72499.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  186 bits (473), Expect = 1e-44
 Identities = 95/138 (68%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
 Frame = +3

Query: 87  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDEXXXXXXXXXXXXXXXXX 266
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD+                 
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD--SKKSSQEKSSTAEPE 58

Query: 267 XXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCRNFLSLKE---DKDPAAI 437
               YASFQGLLALARIT SNADEARGACK+CGRVGHL FQCRNF+S+K+   +KD  A+
Sbjct: 59  GENAYASFQGLLALARITSSNADEARGACKRCGRVGHLAFQCRNFVSVKDGDKEKDAEAV 118

Query: 438 EAAVANGLEKLKASGVRI 491
           +AAV +GLEK+K +G R+
Sbjct: 119 QAAVLSGLEKIKGNGKRV 136


>ref|XP_002881020.1| hypothetical protein ARALYDRAFT_481806 [Arabidopsis lyrata subsp.
           lyrata] gi|297326859|gb|EFH57279.1| hypothetical protein
           ARALYDRAFT_481806 [Arabidopsis lyrata subsp. lyrata]
          Length = 332

 Score =  185 bits (470), Expect = 2e-44
 Identities = 97/131 (74%), Positives = 102/131 (77%), Gaps = 2/131 (1%)
 Frame = +3

Query: 87  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDEXXXXXXXXXXXXXXXXX 266
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   E                 
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPTSKEEPKTTQQKTEDPENS-- 58

Query: 267 XXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCRNFLSLKED--KDPAAIE 440
               YASFQGLLALARITGSN DEARG+CKKCGRVGHLTFQCRNFLS K+D  KDPAAIE
Sbjct: 59  ----YASFQGLLALARITGSNNDEARGSCKKCGRVGHLTFQCRNFLSTKDDKEKDPAAIE 114

Query: 441 AAVANGLEKLK 473
           AAV +GLEK++
Sbjct: 115 AAVLSGLEKIR 125


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