BLASTX nr result

ID: Coptis21_contig00003821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003821
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241578.1| germin-like protein subfamily 2 member 4-lik...   104   9e-38
gb|ACU24455.1| unknown [Glycine max]                                  104   9e-38
gb|AFK47883.1| unknown [Lotus japonicus]                              103   4e-36
ref|XP_002278736.1| PREDICTED: germin-like protein 2 [Vitis vini...   107   5e-36
ref|XP_002302696.1| predicted protein [Populus trichocarpa] gi|1...   106   1e-35

>ref|NP_001241578.1| germin-like protein subfamily 2 member 4-like precursor [Glycine
           max] gi|196122038|gb|ACG69493.1| germin-like protein 17
           [Glycine max]
          Length = 220

 Score =  104 bits (259), Expect(2) = 9e-38
 Identities = 50/59 (84%), Positives = 53/59 (89%)
 Frame = +2

Query: 212 VVTAGNVEKIPGLNTLGVSVARIDYAPGGLNPPHTHPRATEIVFVLEGQLTVGFITTNN 388
           VVTA NV+KIPGLNTLGVS +RIDY  GGLNPPHTHPRATEIVFVL+GQL VGFITT N
Sbjct: 76  VVTAANVDKIPGLNTLGVSFSRIDYKAGGLNPPHTHPRATEIVFVLDGQLDVGFITTAN 134



 Score = 77.8 bits (190), Expect(2) = 9e-38
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = +3

Query: 3   ICVADPSSGVKINGFVCKPMTKVTEADFFFAGLAKPGATNNTQGS 137
           +CVA PSSGVK+NGF CK  + VTEADFFFAGLAKPGATNNT GS
Sbjct: 31  LCVALPSSGVKVNGFACKAESNVTEADFFFAGLAKPGATNNTLGS 75


>gb|ACU24455.1| unknown [Glycine max]
          Length = 220

 Score =  104 bits (259), Expect(2) = 9e-38
 Identities = 50/59 (84%), Positives = 53/59 (89%)
 Frame = +2

Query: 212 VVTAGNVEKIPGLNTLGVSVARIDYAPGGLNPPHTHPRATEIVFVLEGQLTVGFITTNN 388
           VVTA NV+KIPGLNTLGVS +RIDY  GGLNPPHTHPRATEIVFVL+GQL VGFITT N
Sbjct: 76  VVTAANVDKIPGLNTLGVSFSRIDYKAGGLNPPHTHPRATEIVFVLDGQLDVGFITTAN 134



 Score = 77.8 bits (190), Expect(2) = 9e-38
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = +3

Query: 3   ICVADPSSGVKINGFVCKPMTKVTEADFFFAGLAKPGATNNTQGS 137
           +CVA PSSGVK+NGF CK  + VTEADFFFAGLAKPGATNNT GS
Sbjct: 31  LCVALPSSGVKVNGFACKAESNVTEADFFFAGLAKPGATNNTLGS 75


>gb|AFK47883.1| unknown [Lotus japonicus]
          Length = 220

 Score =  103 bits (258), Expect(2) = 4e-36
 Identities = 49/59 (83%), Positives = 53/59 (89%)
 Frame = +2

Query: 212 VVTAGNVEKIPGLNTLGVSVARIDYAPGGLNPPHTHPRATEIVFVLEGQLTVGFITTNN 388
           +VTA NVEKIPGLNTLGVS +RIDY  GGLNPPHTHPRATE+VFVLEG+L VGFITT N
Sbjct: 76  LVTAANVEKIPGLNTLGVSYSRIDYKAGGLNPPHTHPRATEVVFVLEGELDVGFITTAN 134



 Score = 72.8 bits (177), Expect(2) = 4e-36
 Identities = 33/45 (73%), Positives = 36/45 (80%)
 Frame = +3

Query: 3   ICVADPSSGVKINGFVCKPMTKVTEADFFFAGLAKPGATNNTQGS 137
           +CVA PSSGVK+NGF CKP   V+ ADFFFAGLAKPG  NNT GS
Sbjct: 31  LCVALPSSGVKVNGFACKPEANVSAADFFFAGLAKPGVINNTVGS 75


>ref|XP_002278736.1| PREDICTED: germin-like protein 2 [Vitis vinifera]
           gi|111379986|gb|ABH09468.1| germin-like protein 2 [Vitis
           vinifera] gi|147838426|emb|CAN76588.1| hypothetical
           protein VITISV_020289 [Vitis vinifera]
           gi|296089868|emb|CBI39687.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  107 bits (267), Expect(2) = 5e-36
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = +2

Query: 212 VVTAGNVEKIPGLNTLGVSVARIDYAPGGLNPPHTHPRATEIVFVLEGQLTVGFITTNN 388
           +VT  NV+KIPGLNTLGVS++RIDYAPGGLNPPHTHPRATE+VFVLEG+L VGFITT+N
Sbjct: 74  LVTGANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEMVFVLEGELDVGFITTSN 132



 Score = 68.9 bits (167), Expect(2) = 5e-36
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +3

Query: 3   ICVADPSSGVKINGFVCKPMTKVTEADFFFAGLAKPGATNNTQGS 137
           +CVAD +SGVK+NGF CK  T +T  DFFF GLAKPG TNN+ GS
Sbjct: 29  VCVADLTSGVKVNGFSCKDATNITATDFFFDGLAKPGLTNNSMGS 73


>ref|XP_002302696.1| predicted protein [Populus trichocarpa] gi|118482567|gb|ABK93204.1|
           unknown [Populus trichocarpa]
           gi|222844422|gb|EEE81969.1| predicted protein [Populus
           trichocarpa]
          Length = 217

 Score =  106 bits (265), Expect(2) = 1e-35
 Identities = 49/59 (83%), Positives = 55/59 (93%)
 Frame = +2

Query: 212 VVTAGNVEKIPGLNTLGVSVARIDYAPGGLNPPHTHPRATEIVFVLEGQLTVGFITTNN 388
           +VT GNVEKIPGLNTLGVS++RIDYAP GLNPPHTHPRATE++FVLEG+L VGFITT N
Sbjct: 73  LVTGGNVEKIPGLNTLGVSLSRIDYAPDGLNPPHTHPRATEMIFVLEGELDVGFITTAN 131



 Score = 68.6 bits (166), Expect(2) = 1e-35
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +3

Query: 3   ICVADPSSGVKINGFVCKPMTKVTEADFFFAGLAKPGATNNTQGS 137
           +CVA+ S+G+K+NGF CK  T +TEADFFF GLAKPG  NN+ GS
Sbjct: 28  LCVANTSAGIKVNGFTCKAETNITEADFFFDGLAKPGKVNNSVGS 72


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