BLASTX nr result
ID: Coptis21_contig00003821
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003821 (390 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001241578.1| germin-like protein subfamily 2 member 4-lik... 104 9e-38 gb|ACU24455.1| unknown [Glycine max] 104 9e-38 gb|AFK47883.1| unknown [Lotus japonicus] 103 4e-36 ref|XP_002278736.1| PREDICTED: germin-like protein 2 [Vitis vini... 107 5e-36 ref|XP_002302696.1| predicted protein [Populus trichocarpa] gi|1... 106 1e-35 >ref|NP_001241578.1| germin-like protein subfamily 2 member 4-like precursor [Glycine max] gi|196122038|gb|ACG69493.1| germin-like protein 17 [Glycine max] Length = 220 Score = 104 bits (259), Expect(2) = 9e-38 Identities = 50/59 (84%), Positives = 53/59 (89%) Frame = +2 Query: 212 VVTAGNVEKIPGLNTLGVSVARIDYAPGGLNPPHTHPRATEIVFVLEGQLTVGFITTNN 388 VVTA NV+KIPGLNTLGVS +RIDY GGLNPPHTHPRATEIVFVL+GQL VGFITT N Sbjct: 76 VVTAANVDKIPGLNTLGVSFSRIDYKAGGLNPPHTHPRATEIVFVLDGQLDVGFITTAN 134 Score = 77.8 bits (190), Expect(2) = 9e-38 Identities = 36/45 (80%), Positives = 39/45 (86%) Frame = +3 Query: 3 ICVADPSSGVKINGFVCKPMTKVTEADFFFAGLAKPGATNNTQGS 137 +CVA PSSGVK+NGF CK + VTEADFFFAGLAKPGATNNT GS Sbjct: 31 LCVALPSSGVKVNGFACKAESNVTEADFFFAGLAKPGATNNTLGS 75 >gb|ACU24455.1| unknown [Glycine max] Length = 220 Score = 104 bits (259), Expect(2) = 9e-38 Identities = 50/59 (84%), Positives = 53/59 (89%) Frame = +2 Query: 212 VVTAGNVEKIPGLNTLGVSVARIDYAPGGLNPPHTHPRATEIVFVLEGQLTVGFITTNN 388 VVTA NV+KIPGLNTLGVS +RIDY GGLNPPHTHPRATEIVFVL+GQL VGFITT N Sbjct: 76 VVTAANVDKIPGLNTLGVSFSRIDYKAGGLNPPHTHPRATEIVFVLDGQLDVGFITTAN 134 Score = 77.8 bits (190), Expect(2) = 9e-38 Identities = 36/45 (80%), Positives = 39/45 (86%) Frame = +3 Query: 3 ICVADPSSGVKINGFVCKPMTKVTEADFFFAGLAKPGATNNTQGS 137 +CVA PSSGVK+NGF CK + VTEADFFFAGLAKPGATNNT GS Sbjct: 31 LCVALPSSGVKVNGFACKAESNVTEADFFFAGLAKPGATNNTLGS 75 >gb|AFK47883.1| unknown [Lotus japonicus] Length = 220 Score = 103 bits (258), Expect(2) = 4e-36 Identities = 49/59 (83%), Positives = 53/59 (89%) Frame = +2 Query: 212 VVTAGNVEKIPGLNTLGVSVARIDYAPGGLNPPHTHPRATEIVFVLEGQLTVGFITTNN 388 +VTA NVEKIPGLNTLGVS +RIDY GGLNPPHTHPRATE+VFVLEG+L VGFITT N Sbjct: 76 LVTAANVEKIPGLNTLGVSYSRIDYKAGGLNPPHTHPRATEVVFVLEGELDVGFITTAN 134 Score = 72.8 bits (177), Expect(2) = 4e-36 Identities = 33/45 (73%), Positives = 36/45 (80%) Frame = +3 Query: 3 ICVADPSSGVKINGFVCKPMTKVTEADFFFAGLAKPGATNNTQGS 137 +CVA PSSGVK+NGF CKP V+ ADFFFAGLAKPG NNT GS Sbjct: 31 LCVALPSSGVKVNGFACKPEANVSAADFFFAGLAKPGVINNTVGS 75 >ref|XP_002278736.1| PREDICTED: germin-like protein 2 [Vitis vinifera] gi|111379986|gb|ABH09468.1| germin-like protein 2 [Vitis vinifera] gi|147838426|emb|CAN76588.1| hypothetical protein VITISV_020289 [Vitis vinifera] gi|296089868|emb|CBI39687.3| unnamed protein product [Vitis vinifera] Length = 217 Score = 107 bits (267), Expect(2) = 5e-36 Identities = 49/59 (83%), Positives = 56/59 (94%) Frame = +2 Query: 212 VVTAGNVEKIPGLNTLGVSVARIDYAPGGLNPPHTHPRATEIVFVLEGQLTVGFITTNN 388 +VT NV+KIPGLNTLGVS++RIDYAPGGLNPPHTHPRATE+VFVLEG+L VGFITT+N Sbjct: 74 LVTGANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEMVFVLEGELDVGFITTSN 132 Score = 68.9 bits (167), Expect(2) = 5e-36 Identities = 30/45 (66%), Positives = 35/45 (77%) Frame = +3 Query: 3 ICVADPSSGVKINGFVCKPMTKVTEADFFFAGLAKPGATNNTQGS 137 +CVAD +SGVK+NGF CK T +T DFFF GLAKPG TNN+ GS Sbjct: 29 VCVADLTSGVKVNGFSCKDATNITATDFFFDGLAKPGLTNNSMGS 73 >ref|XP_002302696.1| predicted protein [Populus trichocarpa] gi|118482567|gb|ABK93204.1| unknown [Populus trichocarpa] gi|222844422|gb|EEE81969.1| predicted protein [Populus trichocarpa] Length = 217 Score = 106 bits (265), Expect(2) = 1e-35 Identities = 49/59 (83%), Positives = 55/59 (93%) Frame = +2 Query: 212 VVTAGNVEKIPGLNTLGVSVARIDYAPGGLNPPHTHPRATEIVFVLEGQLTVGFITTNN 388 +VT GNVEKIPGLNTLGVS++RIDYAP GLNPPHTHPRATE++FVLEG+L VGFITT N Sbjct: 73 LVTGGNVEKIPGLNTLGVSLSRIDYAPDGLNPPHTHPRATEMIFVLEGELDVGFITTAN 131 Score = 68.6 bits (166), Expect(2) = 1e-35 Identities = 29/45 (64%), Positives = 36/45 (80%) Frame = +3 Query: 3 ICVADPSSGVKINGFVCKPMTKVTEADFFFAGLAKPGATNNTQGS 137 +CVA+ S+G+K+NGF CK T +TEADFFF GLAKPG NN+ GS Sbjct: 28 LCVANTSAGIKVNGFTCKAETNITEADFFFDGLAKPGKVNNSVGS 72