BLASTX nr result

ID: Coptis21_contig00003816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003816
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACP30469.1| plastid glyceraldehyde-3-phosphate dehydrogenase ...   104   8e-21
ref|XP_002315071.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
gb|ABK95756.1| unknown [Populus trichocarpa]                          103   1e-20
gb|AFK37585.1| unknown [Lotus japonicus]                              103   2e-20
ref|XP_002312235.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20

>gb|ACP30469.1| plastid glyceraldehyde-3-phosphate dehydrogenase [Vanilla
           planifolia]
          Length = 188

 Score =  104 bits (259), Expect = 8e-21
 Identities = 54/68 (79%), Positives = 55/68 (80%)
 Frame = -3

Query: 205 LAPLAKVVHEEFGILEGLMXXXXXXXXXXXXVDAPSKKDWRGGRGAAQNIIPSSTGAAKA 26
           LAPLAKVVHEEFGI+EGLM            VDAPSKKDWRGGRGA QNIIPSSTGAAKA
Sbjct: 46  LAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDAPSKKDWRGGRGAGQNIIPSSTGAAKA 105

Query: 25  VGKVLPEL 2
           VGKVLPEL
Sbjct: 106 VGKVLPEL 113


>ref|XP_002315071.1| predicted protein [Populus trichocarpa] gi|222864111|gb|EEF01242.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/68 (77%), Positives = 55/68 (80%)
 Frame = -3

Query: 205 LAPLAKVVHEEFGILEGLMXXXXXXXXXXXXVDAPSKKDWRGGRGAAQNIIPSSTGAAKA 26
           LAPLAKVVHEEFGI+EGLM            VD PS+KDWRGGRGAAQNIIPSSTGAAKA
Sbjct: 241 LAPLAKVVHEEFGIIEGLMTTVHATTATQKTVDGPSRKDWRGGRGAAQNIIPSSTGAAKA 300

Query: 25  VGKVLPEL 2
           VGKVLPEL
Sbjct: 301 VGKVLPEL 308


>gb|ABK95756.1| unknown [Populus trichocarpa]
          Length = 422

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/68 (77%), Positives = 55/68 (80%)
 Frame = -3

Query: 205 LAPLAKVVHEEFGILEGLMXXXXXXXXXXXXVDAPSKKDWRGGRGAAQNIIPSSTGAAKA 26
           LAPLAKVVHEEFGI+EGLM            VD PS+KDWRGGRGAAQNIIPSSTGAAKA
Sbjct: 241 LAPLAKVVHEEFGIIEGLMTTVHATTATQKTVDGPSRKDWRGGRGAAQNIIPSSTGAAKA 300

Query: 25  VGKVLPEL 2
           VGKVLPEL
Sbjct: 301 VGKVLPEL 308


>gb|AFK37585.1| unknown [Lotus japonicus]
          Length = 209

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/68 (79%), Positives = 54/68 (79%)
 Frame = -3

Query: 205 LAPLAKVVHEEFGILEGLMXXXXXXXXXXXXVDAPSKKDWRGGRGAAQNIIPSSTGAAKA 26
           LAPLAKVVHEEFGILEGLM            VD PS KDWRGGRGAAQNIIPSSTGAAKA
Sbjct: 28  LAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKA 87

Query: 25  VGKVLPEL 2
           VGKVLPEL
Sbjct: 88  VGKVLPEL 95


>ref|XP_002312235.1| predicted protein [Populus trichocarpa] gi|222852055|gb|EEE89602.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/68 (79%), Positives = 54/68 (79%)
 Frame = -3

Query: 205 LAPLAKVVHEEFGILEGLMXXXXXXXXXXXXVDAPSKKDWRGGRGAAQNIIPSSTGAAKA 26
           LAPLAKVVHEEFGILEGLM            VD PS KDWRGGRGAAQNIIPSSTGAAKA
Sbjct: 241 LAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKA 300

Query: 25  VGKVLPEL 2
           VGKVLPEL
Sbjct: 301 VGKVLPEL 308


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