BLASTX nr result

ID: Coptis21_contig00003815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003815
         (1352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284668.1| PREDICTED: NAC domain-containing protein 72 ...   393   e-107
emb|CAN62145.1| hypothetical protein VITISV_007842 [Vitis vinifera]   391   e-106
gb|ACI15345.1| NAC domain protein NAC4 [Gossypium hirsutum] gi|2...   385   e-104
ref|XP_002533913.1| NAC domain-containing protein, putative [Ric...   382   e-103
ref|XP_002316917.1| NAC domain protein, IPR003441 [Populus trich...   382   e-103

>ref|XP_002284668.1| PREDICTED: NAC domain-containing protein 72 [Vitis vinifera]
            gi|302143055|emb|CBI20350.3| unnamed protein product
            [Vitis vinifera]
          Length = 333

 Score =  393 bits (1010), Expect = e-107
 Identities = 206/328 (62%), Positives = 240/328 (73%), Gaps = 17/328 (5%)
 Frame = -2

Query: 1270 MGMPQSDSVSDLSLPPGFRFYPTDEELLVQYLCRKIAGQQFSLQIIGEIDLYKFDPWVLP 1091
            MG+P++D +S LSLPPGFRFYPTDEELLVQYLCRK+AGQ FSL+IIGEIDLYKFDPWVLP
Sbjct: 1    MGVPETDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGQGFSLEIIGEIDLYKFDPWVLP 60

Query: 1090 SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKIGIKKALVFY 911
            SKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+ITTEGRK+GIKKALVFY
Sbjct: 61   SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFY 120

Query: 910  VGKAPKGMKTNWIMHEYRLSESTRKSGSSRLDEWVLCRIYKKNSGAQKTIXXXXXXXXXX 731
            VGKAPKG KTNWIMHEYRL E++RK+GSS+LD+WVLCRIYKKNS + K I          
Sbjct: 121  VGKAPKGTKTNWIMHEYRLLENSRKNGSSKLDDWVLCRIYKKNSNSSKPI--AAVLPSKA 178

Query: 730  XXXXXXXXXXSYFDDVLESLPELNDRSFVLPRVNSLKTFQ-DEKLNFQN---GKFEWNNT 563
                      S+ DDVLESLPE++DR F   R+NSL+  Q DEK+NF N   G F+W   
Sbjct: 179  HSNGSSSSSSSHLDDVLESLPEIDDRFFSPNRMNSLRVSQPDEKVNFHNLGSGNFDWATL 238

Query: 562  ANMNSLQN-----YSQIQRPG--NDSN---YSSVPKTCHVEEEVESGFGLKSFD---NSG 422
            A ++SLQ       S  Q P   N+SN     S+P     EEEV+SG   +  D   N G
Sbjct: 239  AGVSSLQELVSGVQSHAQPPAAVNNSNEMYVPSLPPLIQAEEEVQSGLRTQRVDPVMNQG 298

Query: 421  LTQQSSFGLARTFSDAFDPFGLRYMANP 338
               Q+S   +++FS++ DPFG RY   P
Sbjct: 299  FFPQNSNAFSQSFSNSLDPFGFRYPTQP 326


>emb|CAN62145.1| hypothetical protein VITISV_007842 [Vitis vinifera]
          Length = 333

 Score =  391 bits (1005), Expect = e-106
 Identities = 205/328 (62%), Positives = 239/328 (72%), Gaps = 17/328 (5%)
 Frame = -2

Query: 1270 MGMPQSDSVSDLSLPPGFRFYPTDEELLVQYLCRKIAGQQFSLQIIGEIDLYKFDPWVLP 1091
            MG+P++D +S LSLPPGFRFYPTDEELLVQYLCRK+AGQ FSL+IIGEIDLYKFDPWVLP
Sbjct: 1    MGVPETDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGQGFSLEIIGEIDLYKFDPWVLP 60

Query: 1090 SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKIGIKKALVFY 911
            SKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+ITTEGRK+GIKKALVFY
Sbjct: 61   SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFY 120

Query: 910  VGKAPKGMKTNWIMHEYRLSESTRKSGSSRLDEWVLCRIYKKNSGAQKTIXXXXXXXXXX 731
             GKAPKG KTNWIMHEYRL E++RK+GSS+LD+WVLCRIYKKNS + K I          
Sbjct: 121  XGKAPKGTKTNWIMHEYRLLENSRKNGSSKLDDWVLCRIYKKNSNSSKPI--AAVLPSKA 178

Query: 730  XXXXXXXXXXSYFDDVLESLPELNDRSFVLPRVNSLKTFQ-DEKLNFQN---GKFEWNNT 563
                      S+ DDVLESLPE++DR F   R+NSL+  Q DEK+NF N   G F+W   
Sbjct: 179  HSNGSSSSSSSHLDDVLESLPEIDDRFFSPNRMNSLRVSQPDEKVNFHNLGSGNFDWATL 238

Query: 562  ANMNSLQN-----YSQIQRPG--NDSN---YSSVPKTCHVEEEVESGFGLKSFD---NSG 422
            A ++SLQ       S  Q P   N+SN     S+P     EEEV+SG   +  D   N G
Sbjct: 239  AGVSSLQELVSGVQSHAQPPAAVNNSNEMYVPSLPPLIQAEEEVQSGLRTQRVDPVMNQG 298

Query: 421  LTQQSSFGLARTFSDAFDPFGLRYMANP 338
               Q+S   +++FS++ DPFG RY   P
Sbjct: 299  FFPQNSNAFSQSFSNSLDPFGFRYPTQP 326


>gb|ACI15345.1| NAC domain protein NAC4 [Gossypium hirsutum]
            gi|206584355|gb|ACI15350.1| NAC domain protein NAC4
            [Gossypium hirsutum]
          Length = 346

 Score =  385 bits (990), Expect = e-104
 Identities = 213/350 (60%), Positives = 243/350 (69%), Gaps = 30/350 (8%)
 Frame = -2

Query: 1270 MGMPQSDSVSDLSLPPGFRFYPTDEELLVQYLCRKIAGQQFSLQIIGEIDLYKFDPWVLP 1091
            MG+P++D ++ LSLPPGFRFYPTDEELLVQYLCRK+AG  FSLQIIGEIDLYKF+PW LP
Sbjct: 1    MGVPETDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFNPWDLP 60

Query: 1090 SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKIGIKKALVFY 911
            SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRK+GIKKALVFY
Sbjct: 61   SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY 120

Query: 910  VGKAPKGMKTNWIMHEYRLSESTRKSGSSRLDEWVLCRIYKKNSGAQKTIXXXXXXXXXX 731
            VGKAPKG KTNWIMHEYRL E++RKSGSS+LD+WVLCRIYKKNS  QK +          
Sbjct: 121  VGKAPKGTKTNWIMHEYRLIETSRKSGSSKLDDWVLCRIYKKNSSGQKPL--SSVSSREQ 178

Query: 730  XXXXXXXXXXSYFDDVLESLPELNDRSFVLPRVNSLKTFQ-DEKLNFQN---GKFEWNNT 563
                      S  DD+LESLPEL+DR F LPRVNS KT Q D KL FQ+   G  +W + 
Sbjct: 179  STNGSSSSSSSQLDDMLESLPELDDRFFALPRVNSFKTLQNDVKLGFQSLGIGNLDWGSL 238

Query: 562  ANMNSL-----------QNYSQ-IQRPGNDSNYSSV--PKTCH-----------VEEEVE 458
              ++S+           Q  SQ I   GN + Y S   P  C            VEEEV+
Sbjct: 239  GGLSSVPELVPSGQTQTQTQSQGITSYGNSNVYVSTMPPTLCQMDVSTNKIGNSVEEEVQ 298

Query: 457  SGFGLKSFDNSGLTQQSSFGL-ARTFSDAFDPFGLRYMANPVSGRFEFGQ 311
            SG   +  DNSG+ QQ+S  L +  FS++ DP+G R      SG F F Q
Sbjct: 299  SGLRTQRADNSGIFQQNSNVLNSHNFSNSIDPYGFRCPTQ--SGGFGFRQ 346


>ref|XP_002533913.1| NAC domain-containing protein, putative [Ricinus communis]
            gi|223526123|gb|EEF28468.1| NAC domain-containing
            protein, putative [Ricinus communis]
          Length = 337

 Score =  382 bits (981), Expect = e-103
 Identities = 201/341 (58%), Positives = 240/341 (70%), Gaps = 21/341 (6%)
 Frame = -2

Query: 1270 MGMPQSDSVSDLSLPPGFRFYPTDEELLVQYLCRKIAGQQFSLQIIGEIDLYKFDPWVLP 1091
            MG+ + D ++ LSLPPGFRFYPTDEELLVQYLCRK+AG QFSLQIIGEIDLYKFDPWVLP
Sbjct: 1    MGVQEMDPLTQLSLPPGFRFYPTDEELLVQYLCRKVAGHQFSLQIIGEIDLYKFDPWVLP 60

Query: 1090 SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKIGIKKALVFY 911
            SKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+ITTEGRK+GIKKALVFY
Sbjct: 61   SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFY 120

Query: 910  VGKAPKGMKTNWIMHEYRLSESTRKSGSSRLDEWVLCRIYKKNSGAQKTIXXXXXXXXXX 731
            VGKAPKG KTNWIMHEYRL ES+RK+GS++LD+WVLCRIYKKNSGAQK +          
Sbjct: 121  VGKAPKGTKTNWIMHEYRLLESSRKNGSTKLDDWVLCRIYKKNSGAQKPM-TSFPSSKEH 179

Query: 730  XXXXXXXXXXSYFDDVLESLPELNDRSFVLPRVNSLKTFQDEKLNFQN---GKFEWNNTA 560
                      S+ DDVL+SL E++D  F LP   +++   D+K+N  N   G F+W   A
Sbjct: 180  SNNGSSSSSSSHLDDVLDSLTEIDDHFFALPTAKTMQ--PDDKININNLGSGNFDWATLA 237

Query: 559  NMNSLQNYSQIQRPGNDS----NYSS------VPK--------TCHVEEEVESGFGLKSF 434
             +NS+   +  Q+  + +    NY+       VP            +EEEV+SG      
Sbjct: 238  GLNSVSELATAQQAQSQTQGLMNYTQNGDDLYVPSFQQHIGHVDIKMEEEVQSGVRTHRA 297

Query: 433  DNSGLTQQSSFGLARTFSDAFDPFGLRYMANPVSGRFEFGQ 311
            D+S   QQ+S  L +  S++FDP+G RY A P SG F F Q
Sbjct: 298  DSSRFLQQTSSVLTQNLSNSFDPYGFRYSAQPGSG-FGFRQ 337


>ref|XP_002316917.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222859982|gb|EEE97529.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 342

 Score =  382 bits (980), Expect = e-103
 Identities = 206/339 (60%), Positives = 238/339 (70%), Gaps = 25/339 (7%)
 Frame = -2

Query: 1270 MGMPQSDSVSDLSLPPGFRFYPTDEELLVQYLCRKIAGQQFSLQIIGEIDLYKFDPWVLP 1091
            MG+ ++D ++ LSLPPGFRF+PTDEELLVQYLC+K+AG  FSLQIIGEIDLYKFDPW LP
Sbjct: 1    MGLQETDPLAQLSLPPGFRFHPTDEELLVQYLCKKVAGHHFSLQIIGEIDLYKFDPWFLP 60

Query: 1090 SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKIGIKKALVFY 911
             KA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+ITTEGRK+GIKKALVFY
Sbjct: 61   GKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFY 120

Query: 910  VGKAPKGMKTNWIMHEYRLSESTRKSGSSRLDEWVLCRIYKKN-SGAQKTIXXXXXXXXX 734
            VGKAPKG KTNWIMHEYRL ES+RKSGS++LDEWVLCRIYKKN S AQK++         
Sbjct: 121  VGKAPKGTKTNWIMHEYRLLESSRKSGSTKLDEWVLCRIYKKNSSAAQKSM--SSVSSKE 178

Query: 733  XXXXXXXXXXXSYFDDVLESLPELNDRSFVLPRVNSLKTFQ-DEKLNFQN---GKFEWNN 566
                       S+ +DVL+SL E++DR F LPR NSLK  Q +EK+N  N   G F+W  
Sbjct: 179  YSTNGSCSSSSSHLEDVLDSLTEIDDRLFALPRTNSLKQMQHEEKINLANLGSGSFDWAT 238

Query: 565  TANMNSLQNYSQIQRPGNDSNYS-------SVPKTCH-----------VEEEVESGFGLK 440
             A +NSL    Q Q   N SN +       S+P  CH           VEEEV+SG   +
Sbjct: 239  LAGLNSLPELLQTQPGANYSNTNVNGVHVPSMPPLCHADSSTGRMGTSVEEEVQSGVRTQ 298

Query: 439  SFD-NSGLTQQSSFGLARTFSDA-FDPFGLRYMANPVSG 329
              D NSG  QQ+S  +   FS    DP+ LRY   P SG
Sbjct: 299  LRDGNSGAFQQNSGVMTPNFSSTLLDPYELRYSTQPGSG 337


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