BLASTX nr result

ID: Coptis21_contig00003814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003814
         (1403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612922.1| hypothetical protein MTR_5g030570 [Medicago ...    83   2e-13
emb|CBI33885.3| unnamed protein product [Vitis vinifera]               76   2e-11
ref|XP_002879540.1| hypothetical protein ARALYDRAFT_482489 [Arab...    62   4e-07
ref|XP_004148738.1| PREDICTED: uncharacterized protein LOC101205...    62   5e-07
ref|NP_181066.1| VQ motif-containing protein [Arabidopsis thalia...    60   2e-06

>ref|XP_003612922.1| hypothetical protein MTR_5g030570 [Medicago truncatula]
           gi|355514257|gb|AES95880.1| hypothetical protein
           MTR_5g030570 [Medicago truncatula]
          Length = 321

 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 87/287 (30%), Positives = 93/287 (32%), Gaps = 26/287 (9%)
 Frame = +1

Query: 49  VYNISKNDFRNIVQQLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXMRLQRIRPPPLSPIA 228
           VYNISKNDFR+IVQQLTG                           MRLQ+IRPPPLSPI 
Sbjct: 44  VYNISKNDFRDIVQQLTGSPSQEPPPRPPHRPPPKPQS-------MRLQKIRPPPLSPIN 96

Query: 229 RXXXXXXXXXXXXXXXXXXXGFVRXXXXXXXXXXXXXHGDAGWNTTAESPISAYMRYLQN 408
           R                      R              GD  W  T ESPISAYMRYLQN
Sbjct: 97  RPRLPPPMPMPAAPPPLPYNNAPRPAHYGQPSPTPLTPGDL-WANTTESPISAYMRYLQN 155

Query: 409 SM----NGGPSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGNGP--- 567
           SM    + G                                          R  NGP   
Sbjct: 156 SMMDPGSRGNQFPPQPQPHPYPQQQVQGNYQPQPPPPALLPNPNVPPIPSPRFNNGPLPP 215

Query: 568 --------PLLPS-----------PTSQFLLPSPSAYMNXXXXXXXXXXXXXXXXXXXXX 690
                   P +PS           PTSQFLLPSP+ YMN                     
Sbjct: 216 MNAHNHPMPSIPSPHGNGPPLLPSPTSQFLLPSPTGYMNLLSPRSPYPLLSPGFQFPSPL 275

Query: 691 TPGFFSPFSHQSGILXXXXXXXXXXXXXXXXXXXXXXXVLSPRWRDQ 831
               FSP   QSGIL                       + SPRWRDQ
Sbjct: 276 PNFPFSPMG-QSGILGPGPQPPPSPGLMFPLSPSSFFTMPSPRWRDQ 321


>emb|CBI33885.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 54/129 (41%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
 Frame = +1

Query: 49  VYNISKNDFRNIVQQLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXMRLQRIRPPPLSPIA 228
           VYNISKNDFRNIVQQLTG                           MRLQRIRPPPLSPI 
Sbjct: 42  VYNISKNDFRNIVQQLTG--------SPSQEPLPRPPQNPPKHPSMRLQRIRPPPLSPIN 93

Query: 229 RXXXXXXXXXXXXXXXXXXXGFVRXXXXXXXXXXXXXHGDAGWNTTAESPISAYMRYLQN 408
           R                                     GD  W   AESPISAYMRYLQN
Sbjct: 94  RPHIPPPALVPAPAPALAP----APGQVPYNHGLPLMPGDTSWTHVAESPISAYMRYLQN 149

Query: 409 S-MNGGPSP 432
           S ++ GP P
Sbjct: 150 SIIDSGPRP 158


>ref|XP_002879540.1| hypothetical protein ARALYDRAFT_482489 [Arabidopsis lyrata subsp.
           lyrata] gi|297325379|gb|EFH55799.1| hypothetical protein
           ARALYDRAFT_482489 [Arabidopsis lyrata subsp. lyrata]
          Length = 402

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 49/133 (36%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
 Frame = +1

Query: 49  VYNISKNDFRNIVQQLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXMRLQRIRPPPLSPIA 228
           VYNISKNDFR+IVQQLTG                            RLQRIRP PL+ I 
Sbjct: 47  VYNISKNDFRSIVQQLTGSPSRECLPRPPQNNPPKPQNT-------RLQRIRPSPLTQIN 99

Query: 229 RXXXXXXXXXXXXXXXXXXXGFVRXXXXXXXXXXXXX-----HGDAGWNTTAESPISAYM 393
           R                    FVR                  H D  W+ TAESP+S YM
Sbjct: 100 RPAVPLPTMAPPQSHPQ----FVRQHPPQPPFPQSTQQPMMGHRDQFWSNTAESPVSEYM 155

Query: 394 RYLQNSM-NGGPS 429
           RYLQ+S+ + GP+
Sbjct: 156 RYLQSSLGDSGPN 168


>ref|XP_004148738.1| PREDICTED: uncharacterized protein LOC101205131 [Cucumis sativus]
           gi|449514571|ref|XP_004164416.1| PREDICTED:
           uncharacterized LOC101205131 [Cucumis sativus]
          Length = 322

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 36/91 (39%), Positives = 38/91 (41%)
 Frame = +1

Query: 559 NGPPLLPSPTSQFLLPSPSAYMNXXXXXXXXXXXXXXXXXXXXXTPGFFSPFSHQSGILX 738
           NGP LLPSPTSQFLLPSP+ Y N                     TP F  P   QSGIL 
Sbjct: 232 NGPALLPSPTSQFLLPSPTGYYNLLSPKSPYPLLSPGIQFTPPLTPNFAFPSMPQSGILG 291

Query: 739 XXXXXXXXXXXXXXXXXXXXXXVLSPRWRDQ 831
                                 +LSPRWRDQ
Sbjct: 292 PGPHPPPSPGVLFPLSPSGIFPILSPRWRDQ 322


>ref|NP_181066.1| VQ motif-containing protein [Arabidopsis thaliana]
           gi|3668083|gb|AAC61815.1| hypothetical protein
           [Arabidopsis thaliana] gi|26449749|dbj|BAC41998.1|
           unknown protein [Arabidopsis thaliana]
           gi|32189295|gb|AAP75802.1| At2g35230 [Arabidopsis
           thaliana] gi|330253989|gb|AEC09083.1| VQ
           motif-containing protein [Arabidopsis thaliana]
          Length = 402

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 47/133 (35%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
 Frame = +1

Query: 49  VYNISKNDFRNIVQQLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXMRLQRIRPPPLSPIA 228
           VYNISKNDFR+IVQQLTG                            RLQRIRP PL+ + 
Sbjct: 47  VYNISKNDFRSIVQQLTGSPSRESLPRPPQNNSLRPQNT-------RLQRIRPSPLTQLN 99

Query: 229 RXXXXXXXXXXXXXXXXXXXGFVRXXXXXXXXXXXXX-----HGDAGWNTTAESPISAYM 393
           R                    F R                  H D  W+ TAESP+S YM
Sbjct: 100 RPAVPLPSMAPPQSHPQ----FARQPPHQPPFPQTTQQPMMGHRDQFWSNTAESPVSEYM 155

Query: 394 RYLQNSM-NGGPS 429
           RYLQ+S+ + GP+
Sbjct: 156 RYLQSSLGDSGPN 168


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