BLASTX nr result

ID: Coptis21_contig00003808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003808
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   346   7e-93
emb|CBI40723.3| unnamed protein product [Vitis vinifera]              346   7e-93
ref|XP_002510683.1| conserved hypothetical protein [Ricinus comm...   332   1e-88
ref|XP_002306978.1| predicted protein [Populus trichocarpa] gi|2...   325   9e-87
ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [C...   304   3e-80

>ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 595

 Score =  346 bits (887), Expect = 7e-93
 Identities = 165/280 (58%), Positives = 200/280 (71%)
 Frame = +1

Query: 1    SKLGVEKFILYDNDSDDDLHKVVQGLVDGEEYNVKVFFWPWPKAQEAGFSHSAIYAKESC 180
            S++GVEKFILYDN SDD+L  +V+ L + + +NVK   WPWPK QEAGFSHSAIYAK++C
Sbjct: 337  SRIGVEKFILYDNGSDDELQTIVEEL-NQDGFNVKTVLWPWPKTQEAGFSHSAIYAKDTC 395

Query: 181  KWMMYMDVDEFVFAHSWLNASEPSQGMIXXXXXXXXXXXXXXXXXXXXXXDEKAKWLAQP 360
            KWMMY+DVDEFVF+ +WLN+S PS  M+                                
Sbjct: 396  KWMMYVDVDEFVFSPTWLNSSTPSTKMLFSLLPNKP---------------------TSN 434

Query: 361  IGQVSIKCLEYGPSNQQSHPIAGVTQGYTCRRRNEQRHKSIVLLDTIDRSLQNAIHHFRL 540
            +GQ+ I+C E+GPSNQ SHP+ GVTQGYTCRRR EQRHKS+VLL+ +D SL NA+HHF L
Sbjct: 435  VGQILIRCNEFGPSNQHSHPVHGVTQGYTCRRRAEQRHKSVVLLEAVDSSLVNAVHHFGL 494

Query: 541  KEGWRGNTLSLHKGVVHHFKYQAWSEFKAKFRRRVSTYVVDWTQEVNLKSKDRTPGLGLE 720
            KEG+ G  LSL +GVV+H+KYQAWSEFKAKFRRRVS YVVDWT E N  SKDR PGLG  
Sbjct: 495  KEGFNGKRLSLSQGVVNHYKYQAWSEFKAKFRRRVSAYVVDWTDEANPTSKDRAPGLGFL 554

Query: 721  AIEPEGWAQQFCEVNDTRLKRTTQRWFSQDSAIGSKLVWQ 840
             IEP+GWA +FCE+ND RLK  TQRWF+      +K+ W+
Sbjct: 555  PIEPKGWASKFCEMNDERLKMVTQRWFAIPWTSENKMAWE 594


>emb|CBI40723.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  346 bits (887), Expect = 7e-93
 Identities = 165/280 (58%), Positives = 200/280 (71%)
 Frame = +1

Query: 1    SKLGVEKFILYDNDSDDDLHKVVQGLVDGEEYNVKVFFWPWPKAQEAGFSHSAIYAKESC 180
            S++GVEKFILYDN SDD+L  +V+ L + + +NVK   WPWPK QEAGFSHSAIYAK++C
Sbjct: 307  SRIGVEKFILYDNGSDDELQTIVEEL-NQDGFNVKTVLWPWPKTQEAGFSHSAIYAKDTC 365

Query: 181  KWMMYMDVDEFVFAHSWLNASEPSQGMIXXXXXXXXXXXXXXXXXXXXXXDEKAKWLAQP 360
            KWMMY+DVDEFVF+ +WLN+S PS  M+                                
Sbjct: 366  KWMMYVDVDEFVFSPTWLNSSTPSTKMLFSLLPNKP---------------------TSN 404

Query: 361  IGQVSIKCLEYGPSNQQSHPIAGVTQGYTCRRRNEQRHKSIVLLDTIDRSLQNAIHHFRL 540
            +GQ+ I+C E+GPSNQ SHP+ GVTQGYTCRRR EQRHKS+VLL+ +D SL NA+HHF L
Sbjct: 405  VGQILIRCNEFGPSNQHSHPVHGVTQGYTCRRRAEQRHKSVVLLEAVDSSLVNAVHHFGL 464

Query: 541  KEGWRGNTLSLHKGVVHHFKYQAWSEFKAKFRRRVSTYVVDWTQEVNLKSKDRTPGLGLE 720
            KEG+ G  LSL +GVV+H+KYQAWSEFKAKFRRRVS YVVDWT E N  SKDR PGLG  
Sbjct: 465  KEGFNGKRLSLSQGVVNHYKYQAWSEFKAKFRRRVSAYVVDWTDEANPTSKDRAPGLGFL 524

Query: 721  AIEPEGWAQQFCEVNDTRLKRTTQRWFSQDSAIGSKLVWQ 840
             IEP+GWA +FCE+ND RLK  TQRWF+      +K+ W+
Sbjct: 525  PIEPKGWASKFCEMNDERLKMVTQRWFAIPWTSENKMAWE 564


>ref|XP_002510683.1| conserved hypothetical protein [Ricinus communis]
            gi|223551384|gb|EEF52870.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 604

 Score =  332 bits (851), Expect = 1e-88
 Identities = 164/280 (58%), Positives = 196/280 (70%)
 Frame = +1

Query: 1    SKLGVEKFILYDNDSDDDLHKVVQGLVDGEEYNVKVFFWPWPKAQEAGFSHSAIYAKESC 180
            SK+G+EKFILYDNDSDDDL  VV+ L + + YNV+   W WPK QEA FSH+A++A++SC
Sbjct: 347  SKIGIEKFILYDNDSDDDLSIVVKEL-NQQGYNVETLLWFWPKTQEAVFSHAALHARDSC 405

Query: 181  KWMMYMDVDEFVFAHSWLNASEPSQGMIXXXXXXXXXXXXXXXXXXXXXXDEKAKWLAQP 360
            KWMMY+DVDEFVFA SW N+S+P   ++                              + 
Sbjct: 406  KWMMYVDVDEFVFAPSWDNSSQPFDRLLKSLLPSS----------------------GEM 443

Query: 361  IGQVSIKCLEYGPSNQQSHPIAGVTQGYTCRRRNEQRHKSIVLLDTIDRSLQNAIHHFRL 540
            IGQVSIKC E+GPSNQ+S+P+ GVTQGY CRRR E RHKSIVLL+ I RSL N IHHF L
Sbjct: 444  IGQVSIKCNEFGPSNQKSNPVEGVTQGYNCRRRVENRHKSIVLLEAIHRSLHNVIHHFSL 503

Query: 541  KEGWRGNTLSLHKGVVHHFKYQAWSEFKAKFRRRVSTYVVDWTQEVNLKSKDRTPGLGLE 720
            KE +R   LSL + VV+H+KYQAWSEFKAKFRRRVS YVVDW Q +N +SKDRTPGLG E
Sbjct: 504  KEEYRTKQLSLERAVVNHYKYQAWSEFKAKFRRRVSAYVVDWMQAMNPESKDRTPGLGYE 563

Query: 721  AIEPEGWAQQFCEVNDTRLKRTTQRWFSQDSAIGSKLVWQ 840
            AIEP GW  +FCEV D RLK  TQ+WF      G ++ WQ
Sbjct: 564  AIEPPGWENKFCEVRDDRLKFLTQKWFGTQRETGYRMAWQ 603


>ref|XP_002306978.1| predicted protein [Populus trichocarpa] gi|222856427|gb|EEE93974.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  325 bits (834), Expect = 9e-87
 Identities = 157/262 (59%), Positives = 192/262 (73%), Gaps = 2/262 (0%)
 Frame = +1

Query: 1   SKLGVEKFILYDNDSDDDLHKVVQGLVDGEEYNVKVFFWPWPKAQEAGFSHSAIYAKESC 180
           SK+GVEKF+LYDNDSDDDL KV++ L + E YN++ FFW WPK QEAGFSH+++YAK+SC
Sbjct: 22  SKIGVEKFVLYDNDSDDDLMKVIKEL-NQEGYNIETFFWIWPKTQEAGFSHASLYAKDSC 80

Query: 181 KWMMYMDVDEFVFAHSWLNASEPSQGMIXXXXXXXXXXXXXXXXXXXXXXDEKAKWLA-- 354
            WMMY+DVDEFVFA SW+ + +PS                            K +W +  
Sbjct: 81  TWMMYLDVDEFVFAPSWVTSLQPSPD-----------------DPMLRSLLPKTQWWSDP 123

Query: 355 QPIGQVSIKCLEYGPSNQQSHPIAGVTQGYTCRRRNEQRHKSIVLLDTIDRSLQNAIHHF 534
           +PIGQVSI+C E+GPSNQ +HP+ GVTQGYTCRR+ + RHKSIVLL+ I+ SL NAIHHF
Sbjct: 124 RPIGQVSIRCNEFGPSNQITHPLEGVTQGYTCRRKEDNRHKSIVLLEAIEHSLLNAIHHF 183

Query: 535 RLKEGWRGNTLSLHKGVVHHFKYQAWSEFKAKFRRRVSTYVVDWTQEVNLKSKDRTPGLG 714
           +LKEG+R   +SL   VV+H+KYQAWSEFK KFRRRVS YVVDWT+ +N  SKDR PGLG
Sbjct: 184 KLKEGYRTKPVSLEVAVVNHYKYQAWSEFKVKFRRRVSAYVVDWTKGLNPLSKDRAPGLG 243

Query: 715 LEAIEPEGWAQQFCEVNDTRLK 780
            EA+EP GW  +FCEV D RLK
Sbjct: 244 FEAVEPSGWEHKFCEVQDDRLK 265


>ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [Cucumis sativus]
            gi|449489430|ref|XP_004158309.1| PREDICTED: UPF0392
            protein At1g27200-like [Cucumis sativus]
          Length = 577

 Score =  304 bits (778), Expect = 3e-80
 Identities = 142/280 (50%), Positives = 190/280 (67%)
 Frame = +1

Query: 1    SKLGVEKFILYDNDSDDDLHKVVQGLVDGEEYNVKVFFWPWPKAQEAGFSHSAIYAKESC 180
            S++GVEKFILYDN S+D++  V++ L   E YN+++ FW WPK QEAGFSHS  Y+K+SC
Sbjct: 319  SRIGVEKFILYDNGSEDEISAVLKELKQ-EGYNIEIVFWIWPKTQEAGFSHSVEYSKKSC 377

Query: 181  KWMMYMDVDEFVFAHSWLNASEPSQGMIXXXXXXXXXXXXXXXXXXXXXXDEKAKWLAQP 360
            KWMM++D+DEFVF+ SWLN+ +PS+ M+                                
Sbjct: 378  KWMMFVDIDEFVFSPSWLNSLKPSKNMLNSLLPTKNSG---------------------- 415

Query: 361  IGQVSIKCLEYGPSNQQSHPIAGVTQGYTCRRRNEQRHKSIVLLDTIDRSLQNAIHHFRL 540
            IG V++ C +YGPS++ SHP  GVTQGY CRR+ E+RHKSIVLL+ +DRSL N IHHF+L
Sbjct: 416  IGMVTVMCNDYGPSDRISHPAEGVTQGYNCRRKVEERHKSIVLLEAVDRSLLNVIHHFKL 475

Query: 541  KEGWRGNTLSLHKGVVHHFKYQAWSEFKAKFRRRVSTYVVDWTQEVNLKSKDRTPGLGLE 720
            ++ ++   + + + VV+H+KYQAW EF+ KFRRRVS YVVDW    N  SKDR PGLG  
Sbjct: 476  RKEFQSRQMRVEEAVVNHYKYQAWPEFRMKFRRRVSAYVVDWKNSANPTSKDRAPGLGNT 535

Query: 721  AIEPEGWAQQFCEVNDTRLKRTTQRWFSQDSAIGSKLVWQ 840
            A+EP  W ++FCEV D RL+  TQRWF  ++A G ++ WQ
Sbjct: 536  AVEPPEWPRKFCEVRDDRLRLLTQRWFGYETADGYRMAWQ 575


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