BLASTX nr result

ID: Coptis21_contig00003805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003805
         (1738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX58638.1| AGL6-like protein [Epimedium sagittatum]               123   2e-25
gb|ADD25189.1| AGL6 [Nelumbo nucifera]                                121   7e-25
gb|AFX72880.1| MADS-box protein AGL6 [Aquilegia coerulea]             120   1e-24
gb|AFK33514.1| unknown [Lotus japonicus]                              119   3e-24
gb|ABK35281.1| MADS-box transcription factor AGL6a [Crocus sativus]   119   3e-24

>gb|AEX58638.1| AGL6-like protein [Epimedium sagittatum]
          Length = 245

 Score =  123 bits (308), Expect = 2e-25
 Identities = 71/104 (68%), Positives = 74/104 (71%), Gaps = 18/104 (17%)
 Frame = -1

Query: 1516 KSWYQEVSKLKAKYESLQRSQRHLLGEDLGPLSIKELQNLEKQLEGALQQARQ------- 1358
            +SWYQEVSKLKAKYESLQRSQRHLLGEDLGPLS+KELQNLEKQLEGAL QARQ       
Sbjct: 87   QSWYQEVSKLKAKYESLQRSQRHLLGEDLGPLSVKELQNLEKQLEGALTQARQRKTQMMI 146

Query: 1357 -------RKERHLGDINKQLEKKV---LETTCSQLR-YMGFWRS 1259
                   RKERHLGDINKQL+ K     E   SQ R   G W S
Sbjct: 147  EQMEELRRKERHLGDINKQLKNKFQLESEGQASQFRAIQGSWES 190


>gb|ADD25189.1| AGL6 [Nelumbo nucifera]
          Length = 227

 Score =  121 bits (303), Expect = 7e-25
 Identities = 67/101 (66%), Positives = 73/101 (72%), Gaps = 15/101 (14%)
 Frame = -1

Query: 1516 KSWYQEVSKLKAKYESLQRSQRHLLGEDLGPLSIKELQNLEKQLEGALQQARQ------- 1358
            +SWYQEVSKLKAKYESLQRSQRHLLGEDLGPLS+KELQNLEKQLEG+L QARQ       
Sbjct: 73   QSWYQEVSKLKAKYESLQRSQRHLLGEDLGPLSVKELQNLEKQLEGSLSQARQRKAQIMM 132

Query: 1357 -------RKERHLGDINKQLEKKVLETTCSQLRYM-GFWRS 1259
                   RKERHLGDINKQL+ K+        R + G W S
Sbjct: 133  EQMEELRRKERHLGDINKQLKNKLEAEGQGSFRAIPGSWNS 173


>gb|AFX72880.1| MADS-box protein AGL6 [Aquilegia coerulea]
          Length = 256

 Score =  120 bits (300), Expect = 1e-24
 Identities = 71/124 (57%), Positives = 80/124 (64%), Gaps = 17/124 (13%)
 Frame = -1

Query: 1579 SSKETRGPSIGVSEELPEGYEKSWYQEVSKLKAKYESLQRSQRHLLGEDLGPLSIKELQN 1400
            SS  ++  ++ V++   +G    WYQEVSKLKAKYESLQRSQRHLLGEDLGPLS+KEL N
Sbjct: 74   SSYNSQDGTLAVADRETQG----WYQEVSKLKAKYESLQRSQRHLLGEDLGPLSVKELHN 129

Query: 1399 LEKQLEGALQQARQ--------------RKERHLGDINKQLEKKVLETTCSQLRY---MG 1271
            LEKQLEGAL QARQ              RKERHLGDINKQL+ K       Q  Y    G
Sbjct: 130  LEKQLEGALAQARQRKTQVMMEQMEDLRRKERHLGDINKQLKNKYQLDAEGQAPYRALQG 189

Query: 1270 FWRS 1259
             W S
Sbjct: 190  SWES 193


>gb|AFK33514.1| unknown [Lotus japonicus]
          Length = 244

 Score =  119 bits (297), Expect = 3e-24
 Identities = 62/84 (73%), Positives = 68/84 (80%), Gaps = 14/84 (16%)
 Frame = -1

Query: 1516 KSWYQEVSKLKAKYESLQRSQRHLLGEDLGPLSIKELQNLEKQLEGALQQARQRK----- 1352
            +SWYQEVSKLKAKYESLQR+QRHLLGEDLGPLS+KELQNLEKQLEGAL QARQRK     
Sbjct: 86   QSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALAQARQRKTEIMI 145

Query: 1351 ---------ERHLGDINKQLEKKV 1307
                     ERHLGD+NKQL+ K+
Sbjct: 146  EQMEELRARERHLGDLNKQLKLKL 169


>gb|ABK35281.1| MADS-box transcription factor AGL6a [Crocus sativus]
          Length = 241

 Score =  119 bits (297), Expect = 3e-24
 Identities = 67/101 (66%), Positives = 74/101 (73%), Gaps = 15/101 (14%)
 Frame = -1

Query: 1516 KSWYQEVSKLKAKYESLQRSQRHLLGEDLGPLSIKELQNLEKQLEGALQQARQR------ 1355
            +SWYQEVSKLKAK+ESLQRSQRHLLGEDLGPLS+KELQ LE+QLE AL QARQR      
Sbjct: 87   QSWYQEVSKLKAKFESLQRSQRHLLGEDLGPLSVKELQQLERQLESALSQARQRKTQIML 146

Query: 1354 --------KERHLGDINKQLEKKVLETTCSQLR-YMGFWRS 1259
                    KERHLG+INKQL+ K LET  S  R + G W S
Sbjct: 147  DQMEELRKKERHLGEINKQLKNK-LETEGSTFRAFQGSWES 186


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