BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003802
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...   107   5e-21
emb|CBI38961.3| unnamed protein product [Vitis vinifera]              107   5e-21
ref|XP_002437553.1| hypothetical protein SORBIDRAFT_10g029250 [S...    84   3e-14
gb|AET06166.1| CCCH-type zinc finger protein LIC [Zea mays]            84   4e-14
ref|NP_001147895.1| nucleic acid binding protein [Zea mays] gi|1...    84   4e-14

>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like
           [Vitis vinifera]
          Length = 383

 Score =  107 bits (266), Expect = 5e-21
 Identities = 57/122 (46%), Positives = 73/122 (59%)
 Frame = +1

Query: 154 ERERNMLNSKVMQFENLQRNPYVISPNTTIGGAIPFPATNNSAFPAPVQKNAPPSVSSFS 333
           ERER++LNSK+++F++L R PY   PN+T+  AI  PA N  A     Q N PPS SSFS
Sbjct: 170 ERERSLLNSKLIEFDSLLRKPYAAPPNSTL--AIQSPAPNPDASSLTAQNNTPPSASSFS 227

Query: 334 QLGIPTNQGSNTSVVASTNSIFGQKSVPPVSTQPSDSFGSNNLTFGTQGLFGSQQHTQQQ 513
           QL    N G  T     +N+ FGQ +    S+Q S +FG+NNL FG  G FGSQ   Q  
Sbjct: 228 QLSTSPNMGFGTRPSTPSNNAFGQSNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMH 287

Query: 514 GN 519
           G+
Sbjct: 288 GS 289


>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  107 bits (266), Expect = 5e-21
 Identities = 57/122 (46%), Positives = 73/122 (59%)
 Frame = +1

Query: 154 ERERNMLNSKVMQFENLQRNPYVISPNTTIGGAIPFPATNNSAFPAPVQKNAPPSVSSFS 333
           ERER++LNSK+++F++L R PY   PN+T+  AI  PA N  A     Q N PPS SSFS
Sbjct: 181 ERERSLLNSKLIEFDSLLRKPYAAPPNSTL--AIQSPAPNPDASSLTAQNNTPPSASSFS 238

Query: 334 QLGIPTNQGSNTSVVASTNSIFGQKSVPPVSTQPSDSFGSNNLTFGTQGLFGSQQHTQQQ 513
           QL    N G  T     +N+ FGQ +    S+Q S +FG+NNL FG  G FGSQ   Q  
Sbjct: 239 QLSTSPNMGFGTRPSTPSNNAFGQSNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMH 298

Query: 514 GN 519
           G+
Sbjct: 299 GS 300


>ref|XP_002437553.1| hypothetical protein SORBIDRAFT_10g029250 [Sorghum bicolor]
           gi|241915776|gb|EER88920.1| hypothetical protein
           SORBIDRAFT_10g029250 [Sorghum bicolor]
          Length = 412

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
 Frame = +1

Query: 154 ERERNMLNSKVMQFENLQRNPYV-ISPNTTIGGAIPFPATNNSAFPAPVQKNAPPSVSSF 330
           E ERN+ N+K+ +F N   NP++ +S   +      FP   N++     Q N PP  SSF
Sbjct: 196 EGERNLQNAKLTEFNNFLNNPHLSVSQTPSFPTVASFPEVKNNSPFGVSQNNGPPVFSSF 255

Query: 331 SQLGIPTN--QGSNTSVVASTNSIFGQKSVPPVSTQPSDSFGSNNLTFGTQGLFGSQQHT 504
           SQ+G   N   GS T+    TNSIFGQ + P     P+ +FG +++ FG  G FGSQ   
Sbjct: 256 SQIGAANNIGPGSRTTPGFPTNSIFGQSNQPSHPGFPTPTFGRSDMKFGVSGSFGSQ--I 313

Query: 505 QQQGNGNASTFNM 543
            QQ +G+    NM
Sbjct: 314 SQQSSGSLQGSNM 326


>gb|AET06166.1| CCCH-type zinc finger protein LIC [Zea mays]
          Length = 401

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
 Frame = +1

Query: 154 ERERNMLNSKVMQFENLQRNPYV-ISPNTTIGGAIPFPAT-NNSAFPAPVQKNAPPSVSS 327
           E E+N+ N+K+  F N    P + +S   +      FP   NNSAF    Q N PP  SS
Sbjct: 185 EGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVS-QNNGPPVFSS 243

Query: 328 FSQLGIPTNQG--SNTSVVASTNSIFGQKSVPPVSTQPSDSFGSNNLTFGTQGLFGSQQH 501
           FSQ+G+ TN G  S T+    TN++FGQ + P   T P+ +FG +++ FG  G FGSQ  
Sbjct: 244 FSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQIS 303

Query: 502 TQQQG---NGNASTF 537
            Q  G     N S+F
Sbjct: 304 QQSSGTFQGSNMSSF 318


>ref|NP_001147895.1| nucleic acid binding protein [Zea mays] gi|195614438|gb|ACG29049.1|
           nucleic acid binding protein [Zea mays]
           gi|413934834|gb|AFW69385.1| putative zinc finger
           C-x8-C-x5-C-x3-H type family protein [Zea mays]
          Length = 401

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
 Frame = +1

Query: 154 ERERNMLNSKVMQFENLQRNPYV-ISPNTTIGGAIPFPAT-NNSAFPAPVQKNAPPSVSS 327
           E E+N+ N+K+  F N    P + +S   +      FP   NNSAF    Q N PP  SS
Sbjct: 185 EGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVS-QNNGPPVFSS 243

Query: 328 FSQLGIPTNQG--SNTSVVASTNSIFGQKSVPPVSTQPSDSFGSNNLTFGTQGLFGSQQH 501
           FSQ+G+ TN G  S T+    TN++FGQ + P   T P+ +FG +++ FG  G FGSQ  
Sbjct: 244 FSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQIS 303

Query: 502 TQQQG---NGNASTF 537
            Q  G     N S+F
Sbjct: 304 QQSSGTFQGSNMSSF 318