BLASTX nr result

ID: Coptis21_contig00003800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003800
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides]      178   7e-66
ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-64
ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   174   3e-64
ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...   174   5e-64
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   174   3e-61

>gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 370

 Score =  178 bits (451), Expect(2) = 7e-66
 Identities = 86/110 (78%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
 Frame = -1

Query: 603 QVLHQNQWIDIPPVPGALVVNIGDLLQLISNDKFVSVEHRVLANHIGPRVSAACFFT-NL 427
           Q+ HQN WID+PPV GALVVNIGDLLQLISNDKF SVEHRV+ANHIGPRVS A FFT +L
Sbjct: 261 QIFHQNHWIDVPPVHGALVVNIGDLLQLISNDKFKSVEHRVVANHIGPRVSVASFFTPHL 320

Query: 426 GPSTKTYGPIKELLSQENPAIYRETTLKEFVAYYDTKGLDGNSALTHFKV 277
            PST+ YGPIKELLS+ENP IY E T+K+F+AYYD+KGLDGNSAL HFK+
Sbjct: 321 YPSTRLYGPIKELLSEENPPIYCEITVKDFIAYYDSKGLDGNSALPHFKL 370



 Score = 99.8 bits (247), Expect(2) = 7e-66
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = -2

Query: 809 REMDCVKGHVLLGHYYPACPQPELTMGTTKHSDPDFLTILLQDHIGGLQV 660
           +EMDCVKGH LL HYYPACP+PEL MGTTKHSDPDFLTILLQD IGGLQ+
Sbjct: 213 KEMDCVKGHALLSHYYPACPEPELAMGTTKHSDPDFLTILLQDDIGGLQI 262


>ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|222864751|gb|EEF01882.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  173 bits (439), Expect(2) = 2e-64
 Identities = 87/114 (76%), Positives = 97/114 (85%), Gaps = 5/114 (4%)
 Frame = -1

Query: 603 QVLHQNQWIDIPPVPGALVVNIGDLLQ----LISNDKFVSVEHRVLANHIGPRVSAACFF 436
           Q+ HQN WID+PPV GALVVNIGDLLQ    LISNDKF SVEHRV+ANHIGPRVS A FF
Sbjct: 261 QIFHQNHWIDVPPVHGALVVNIGDLLQASTVLISNDKFKSVEHRVVANHIGPRVSVASFF 320

Query: 435 T-NLGPSTKTYGPIKELLSQENPAIYRETTLKEFVAYYDTKGLDGNSALTHFKV 277
           T +L PST+ YGPIKELLS+ENP IY E T+K+F+AYYD+KGLDGNSAL HFKV
Sbjct: 321 TPHLYPSTRLYGPIKELLSEENPPIYCEITVKDFIAYYDSKGLDGNSALPHFKV 374



 Score = 99.8 bits (247), Expect(2) = 2e-64
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = -2

Query: 809 REMDCVKGHVLLGHYYPACPQPELTMGTTKHSDPDFLTILLQDHIGGLQV 660
           +EMDCVKGH LL HYYPACP+PEL MGTTKHSDPDFLTILLQD IGGLQ+
Sbjct: 213 KEMDCVKGHALLSHYYPACPEPELAMGTTKHSDPDFLTILLQDDIGGLQI 262


>ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Glycine max]
          Length = 369

 Score =  174 bits (441), Expect(2) = 3e-64
 Identities = 84/110 (76%), Positives = 95/110 (86%), Gaps = 1/110 (0%)
 Frame = -1

Query: 603 QVLHQNQWIDIPPVPGALVVNIGDLLQLISNDKFVSVEHRVLANHIGPRVSAACFFT-NL 427
           QVL    W+D+PPVPGALVVNIGDLLQLISNDKF SVEHRVLAN IGPRVS ACFFT +L
Sbjct: 258 QVLGPYGWVDVPPVPGALVVNIGDLLQLISNDKFKSVEHRVLANRIGPRVSVACFFTLHL 317

Query: 426 GPSTKTYGPIKELLSQENPAIYRETTLKEFVAYYDTKGLDGNSALTHFKV 277
            P+T+ YGPIKELLS+E P +YRET+LK+F+AYYD KGLDGNSAL HF +
Sbjct: 318 YPTTRIYGPIKELLSEEKPPVYRETSLKDFIAYYDNKGLDGNSALDHFMI 367



 Score = 97.8 bits (242), Expect(2) = 3e-64
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = -2

Query: 803 MDCVKGHVLLGHYYPACPQPELTMGTTKHSDPDFLTILLQDHIGGLQVL 657
           MDC KGH +L HYYP+CP+PELTMGTT+HSDPDFLTILLQDHIGGLQVL
Sbjct: 212 MDCAKGHSILFHYYPSCPEPELTMGTTRHSDPDFLTILLQDHIGGLQVL 260


>ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Glycine max]
          Length = 374

 Score =  174 bits (440), Expect(2) = 5e-64
 Identities = 84/110 (76%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
 Frame = -1

Query: 603 QVLHQNQWIDIPPVPGALVVNIGDLLQLISNDKFVSVEHRVLANHIGPRVSAACFFT-NL 427
           QVL  N W+D+PPVPGALVVNIGDLLQLISNDKF SVEHRVLAN IGPRVS ACFFT + 
Sbjct: 263 QVLSHNGWVDVPPVPGALVVNIGDLLQLISNDKFKSVEHRVLANRIGPRVSVACFFTIHF 322

Query: 426 GPSTKTYGPIKELLSQENPAIYRETTLKEFVAYYDTKGLDGNSALTHFKV 277
            PST+ YGPIKELLS+E P +YRET+LK+F+AYY  KGLDGNSAL HF +
Sbjct: 323 YPSTRIYGPIKELLSEEXPPVYRETSLKDFIAYYYNKGLDGNSALDHFMI 372



 Score = 97.8 bits (242), Expect(2) = 5e-64
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = -2

Query: 803 MDCVKGHVLLGHYYPACPQPELTMGTTKHSDPDFLTILLQDHIGGLQVL 657
           MDC KGH +L HYYP+CP+PELTMGTT+HSDPDFLTILLQDHIGGLQVL
Sbjct: 217 MDCAKGHSILFHYYPSCPEPELTMGTTRHSDPDFLTILLQDHIGGLQVL 265


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  174 bits (441), Expect(2) = 3e-61
 Identities = 80/110 (72%), Positives = 99/110 (90%), Gaps = 1/110 (0%)
 Frame = -1

Query: 603 QVLHQNQWIDIPPVPGALVVNIGDLLQLISNDKFVSVEHRVLANHIGPRVSAACFF-TNL 427
           QVLHQ QWID+PP+PGALV+N+GDLLQLI+ND+F SVEHRVLANHIGPRVS ACFF T++
Sbjct: 256 QVLHQGQWIDVPPMPGALVINVGDLLQLITNDRFKSVEHRVLANHIGPRVSVACFFSTSI 315

Query: 426 GPSTKTYGPIKELLSQENPAIYRETTLKEFVAYYDTKGLDGNSALTHFKV 277
            PS+K YGPIKELLS+ENP  Y+ETT+ ++VAY+++KGLDG SAL HF++
Sbjct: 316 QPSSKLYGPIKELLSEENPPKYKETTVGDYVAYFNSKGLDGTSALPHFRL 365



 Score = 87.8 bits (216), Expect(2) = 3e-61
 Identities = 38/51 (74%), Positives = 45/51 (88%)
 Frame = -2

Query: 809 REMDCVKGHVLLGHYYPACPQPELTMGTTKHSDPDFLTILLQDHIGGLQVL 657
           ++MDC +G  +L HYYP+CPQPELTMGTTKH+D DFLT+LLQD IGGLQVL
Sbjct: 208 KDMDCTEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVLLQDQIGGLQVL 258


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