BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003798
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36037.3| unnamed protein product [Vitis vinifera]              101   5e-20
emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]   101   5e-20
ref|XP_002327364.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002894344.1| pentatricopeptide repeat-containing protein ...    89   3e-16
ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis tha...    86   4e-15

>emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  101 bits (252), Expect = 5e-20
 Identities = 57/134 (42%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
 Frame = -1

Query: 405 YNTITKRTFATKYSGKVITKSQNEKIFSVQVETPDI-PRDIKGYTLPRKHLICKITQILH 229
           +  +  R F TKYSG+V+ ++ + +  +V+VE   I P D++GY LPR+ LICK+T+ILH
Sbjct: 37  FRLLNTRHFGTKYSGRVVRETSDRRSVAVRVEATGILPTDVRGYPLPRRDLICKVTKILH 96

Query: 228 XXXXXXXXXXXXXXXXXXXXXXXXXPSEVSEILKSLHTPYKALEFFKFCYT-IPNFRHDC 52
                                    PSE SEILK L+ P+ +LEFF+FC + IP F+H+ 
Sbjct: 97  ----SSSDPFPDLSEYLQTLNLTITPSEASEILKCLNHPHLSLEFFRFCSSNIPKFQHNS 152

Query: 51  FTYNRILTILSRCS 10
           FTYNR+L ILS+ S
Sbjct: 153 FTYNRLLVILSKPS 166


>emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
          Length = 790

 Score =  101 bits (252), Expect = 5e-20
 Identities = 57/134 (42%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
 Frame = -1

Query: 405 YNTITKRTFATKYSGKVITKSQNEKIFSVQVETPDI-PRDIKGYTLPRKHLICKITQILH 229
           +  +  R F TKYSG+V+ ++ + +  +V+VE   I P D++GY LPR+ LICK+T+ILH
Sbjct: 37  FRLLNTRHFGTKYSGRVVRETSDRRSVAVRVEATGILPTDVRGYPLPRRDLICKVTKILH 96

Query: 228 XXXXXXXXXXXXXXXXXXXXXXXXXPSEVSEILKSLHTPYKALEFFKFCYT-IPNFRHDC 52
                                    PSE SEILK L+ P+ +LEFF+FC + IP F+H+ 
Sbjct: 97  ----SSSDPFPDLSEYLQTLNLTITPSEASEILKCLNHPHLSLEFFRFCSSNIPKFQHNS 152

Query: 51  FTYNRILTILSRCS 10
           FTYNR+L ILS+ S
Sbjct: 153 FTYNRLLVILSKPS 166


>ref|XP_002327364.1| predicted protein [Populus trichocarpa] gi|222835734|gb|EEE74169.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/137 (39%), Positives = 73/137 (53%), Gaps = 8/137 (5%)
 Frame = -1

Query: 387 RTFATKYSGKVITKSQNEKIFSVQVETPD-IPRDIKGYTLPRKHLICKITQILHXXXXXX 211
           R + TKY+ K+ + S   +  S QV  P  +P D +GY +PR+ LIC+ TQIL       
Sbjct: 22  RRYGTKYTAKITSTSPTGRTVSAQVTPPQPLPSDSRGYPIPRRQLICEATQILLQTHRSP 81

Query: 210 XXXXXXXXXXXXXXXXXXXPS------EVSEILKSLHTPYKALEFFKFCYTI-PNFRHDC 52
                               S      E SEILKSL++P  AL FF FC ++ PNF HDC
Sbjct: 82  QKLLDPTDPFLCLQNYLSALSISLTPNEASEILKSLNSPSLALRFFHFCPSLSPNFHHDC 141

Query: 51  FTYNRILTILSRCSGPE 1
           FTY+RI+ ILS+ + P+
Sbjct: 142 FTYSRIILILSKSNLPD 158


>ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297340186|gb|EFH70603.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 650

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
 Frame = -1

Query: 426 KMRHHHFYNTITK---RTFATKYSGKVITKSQNEKIFSVQVETPD-IPRDIKGYTLPRKH 259
           + R  +  NTIT+   R +ATKY  KV + S + +  S +V  P+ +P D++GY LPR+H
Sbjct: 5   RRRFFNSVNTITRPNRRQYATKYVAKVTSSSPSGRSLSAEVSLPNPLPADVRGYPLPRRH 64

Query: 258 LICKITQILHXXXXXXXXXXXXXXXXXXXXXXXXXPSEVSEILKSLHTPYKALEFFKFCY 79
           LIC+ T ++                          P E SEILKSL++P  A+EFFKF  
Sbjct: 65  LICRATNLI-IGATNLSDAFSDLSDYLSSLTLSLTPDEASEILKSLNSPLVAVEFFKFVP 123

Query: 78  TI-PNFRHDCFTYNRILTILSR 16
           ++ PN ++D F YNRI+ ILSR
Sbjct: 124 SLCPNSQNDPFLYNRIILILSR 145


>ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
           gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g51965, mitochondrial; Flags: Precursor
           gi|4220445|gb|AAD12672.1| Similar to gi|3004555
           F19F24.14 salt inducible protein homolog from
           Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
           thaliana] gi|332194619|gb|AEE32740.1| ABA
           Overly-Sensitive 5 protein [Arabidopsis thaliana]
          Length = 650

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
 Frame = -1

Query: 426 KMRHHHFYNTITK---RTFATKYSGKVITKSQNEKIFSVQVETPD-IPRDIKGYTLPRKH 259
           + R  +  NTIT+   R +ATKY  KV + S + +  S +V  P+ +P D++GY LPR+H
Sbjct: 5   RRRFFNSVNTITRPNRRHYATKYVAKVTSSSPSGRSLSAEVSLPNPLPADVRGYPLPRRH 64

Query: 258 LICKITQILHXXXXXXXXXXXXXXXXXXXXXXXXXPSEVSEILKSLHTPYKALEFFKFCY 79
           LIC+ T ++                          P E SEILKSL++P  A+EFFK   
Sbjct: 65  LICRATNLI-TGASNLSDAFSDLSDYLSSLSLSLTPDEASEILKSLNSPLLAVEFFKLVP 123

Query: 78  TI-PNFRHDCFTYNRILTILSRCSGPE 1
           ++ P  ++D F YNRI+ ILSR + P+
Sbjct: 124 SLCPYSQNDPFLYNRIILILSRSNLPD 150