BLASTX nr result

ID: Coptis21_contig00003780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003780
         (2510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633414.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   653   0.0  
ref|XP_002525869.1| conserved hypothetical protein [Ricinus comm...   653   0.0  
ref|XP_004133736.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   637   e-180
ref|XP_002865759.1| EMB1879 [Arabidopsis lyrata subsp. lyrata] g...   625   e-176
ref|NP_568713.1| uncharacterized protein [Arabidopsis thaliana] ...   623   e-176

>ref|XP_003633414.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
            gi|297739449|emb|CBI29631.3| unnamed protein product
            [Vitis vinifera]
          Length = 504

 Score =  653 bits (1685), Expect = 0.0
 Identities = 344/518 (66%), Positives = 399/518 (77%), Gaps = 10/518 (1%)
 Frame = -2

Query: 1966 MPPLHRIKQQXXXXXSAVVTQTQDAHQLLVRETLRISANLASSSHAPASE---------- 1817
            MPP+ ++KQ       A    +QDA +LL RETLRISA+LASS  AP++           
Sbjct: 1    MPPM-KLKQSPSPQTLAT---SQDA-RLLARETLRISASLASSP-APSAVASSPEARNLG 54

Query: 1816 IKDAQFINSSLRVICCEELDGRRWKYVAETDTXXXXXXXXXXXXXXXXXXSLQAPQPPID 1637
            I D QF+++SLR+ICCEE++GRRW YV + +                     Q PQ P+D
Sbjct: 55   IVDEQFVDASLRLICCEEINGRRWNYVVDNEGGNGQGRNGSLRAVCS-----QTPQAPVD 109

Query: 1636 HFMSFIRSYVVPEGFPDSVSTSYVPYMKWRALKHFFGGAMGVFTTQALLSSVGLSRDRAT 1457
              MSFIRSYVVPEGFPDSV+ SYVPYM WRALKHFFGGAMGVFTTQ LL+SVG+SR+R+ 
Sbjct: 110  ELMSFIRSYVVPEGFPDSVTPSYVPYMSWRALKHFFGGAMGVFTTQTLLNSVGVSRNRSA 169

Query: 1456 SGAVAINWILKDGAGRIGKMLFARQGKKFDYDLKQLRFSGDLLMELGAGVELATALVPHL 1277
             GAVAINWILKDGAGR+GKMLFARQGKKFDYDLKQLR +GDLLMELGAGVELATA VPHL
Sbjct: 170  PGAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRLAGDLLMELGAGVELATAAVPHL 229

Query: 1276 FLPLXXXXXXXXXXXXVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIM 1097
            FLPL            VTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIM
Sbjct: 230  FLPLACAANVAKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIM 289

Query: 1096 ISKKNPSLVSTFTLLSCGYILSSYNEVKSVVLRTLNRARFTVAVESFLETGDVPSLQVGN 917
            ISK+NPSLV+TF LLSCGY+LSSY EVKSVVL TLNRARF+VA++SFL+TG VPSLQ GN
Sbjct: 290  ISKRNPSLVTTFALLSCGYVLSSYQEVKSVVLHTLNRARFSVAIDSFLKTGRVPSLQEGN 349

Query: 916  MRESVFTFPWSKNRPIVIGSRFKDAFQEPDSYLTIEPLFNNERYIVTYNPLKGNIYALLK 737
            M+E++F+FPW +++PIV+GSRFKDAFQ+  SYL+IEPLF  ERY+VTYNP KG +YALLK
Sbjct: 350  MKENIFSFPWLEDKPIVLGSRFKDAFQDAGSYLSIEPLFEKERYLVTYNPSKGKVYALLK 409

Query: 736  DKAKSDDILKAAYHAHVLLHFIRXXXXXXXXXXXHNRNDLLDFIESLSTHHSLPTTIDIE 557
            D+AKSDDILKAA+HAH+LLHFI                D         + H +P+T D+ 
Sbjct: 410  DQAKSDDILKAAFHAHMLLHFIVSSNGSESFPTKQQDYD---------STHLMPSTADLA 460

Query: 556  AHIAESCKIVSSSYGVFKKKASEQGWMMSDSLLNPGRA 443
            AHIAESCK+VS+SYG+FK KA+EQGW MS+SLLNPGRA
Sbjct: 461  AHIAESCKMVSTSYGLFKSKAAEQGWTMSESLLNPGRA 498


>ref|XP_002525869.1| conserved hypothetical protein [Ricinus communis]
            gi|223534874|gb|EEF36563.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 520

 Score =  653 bits (1684), Expect = 0.0
 Identities = 350/530 (66%), Positives = 397/530 (74%), Gaps = 22/530 (4%)
 Frame = -2

Query: 1966 MPPLHRIKQQXXXXXSAVV--TQTQDAHQLLVRETLRISANLASSSHAPASEIKD----- 1808
            M P  ++KQ        +   T +QDA +LLVRETLRISANLAS+  A +  + D     
Sbjct: 1    MAPPIKLKQSPNPTAQTLTSTTSSQDA-RLLVRETLRISANLASAPPAESLALLDNNISN 59

Query: 1807 ---------------AQFINSSLRVICCEELDGRRWKYVAETDTXXXXXXXXXXXXXXXX 1673
                            +F++SSLR+ICCEE+DGR+WKYVAE D                 
Sbjct: 60   DSSNKNKSRKLGFVEEEFVDSSLRLICCEEIDGRKWKYVAEND------GFGRFKKNSFR 113

Query: 1672 XXSLQAPQPPIDHFMSFIRSYVVPEGFPDSVSTSYVPYMKWRALKHFFGGAMGVFTTQAL 1493
              SLQ PQ P++  MSFIRSYVVPEGFPDSV+ SYVPYM WRALKHFFGGAMGVFTT+ L
Sbjct: 114  SVSLQNPQAPVEELMSFIRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTKTL 173

Query: 1492 LSSVGLSRDRATSGAVAINWILKDGAGRIGKMLFARQGKKFDYDLKQLRFSGDLLMELGA 1313
            LSSVG+S+  A  GAVAINWILKDGAGR+GKMLFARQGKKFDYDLKQLRF+GDLLMELGA
Sbjct: 174  LSSVGVSKSTAIPGAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGA 233

Query: 1312 GVELATALVPHLFLPLXXXXXXXXXXXXVTSTSTRTPIYKAFAKGENIGDVTAKGECVGN 1133
            GVELATA VPHLFLPL            VTSTSTRTPIYKAFAKGENIGDVTAKGECVGN
Sbjct: 234  GVELATAAVPHLFLPLACAANVAKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGN 293

Query: 1132 IADLLGTGLSIMISKKNPSLVSTFTLLSCGYILSSYNEVKSVVLRTLNRARFTVAVESFL 953
            +ADLLGTGLSIMISK+NPSLV+TF LLSCGY+ SSY EVKSVVL TLNRARF+VAVESFL
Sbjct: 294  VADLLGTGLSIMISKRNPSLVTTFALLSCGYVFSSYQEVKSVVLHTLNRARFSVAVESFL 353

Query: 952  ETGDVPSLQVGNMRESVFTFPWSKNRPIVIGSRFKDAFQEPDSYLTIEPLFNNERYIVTY 773
            +TG VPSLQ GN RE++F+FPW K RPIVIGSRFKDAFQ+P ++L IEPLF  ERYIVTY
Sbjct: 354  KTGRVPSLQEGNTRENIFSFPWLKERPIVIGSRFKDAFQDPSAFLAIEPLFEKERYIVTY 413

Query: 772  NPLKGNIYALLKDKAKSDDILKAAYHAHVLLHFIRXXXXXXXXXXXHNRNDLLDFIESLS 593
            NP K  +YALLKD+AK+DDILKAA+HAHVLLHFI              ++D  ++I  LS
Sbjct: 414  NPTKDKVYALLKDQAKADDILKAAFHAHVLLHFINSSSKSRSSSLKQQQHDHSNYI--LS 471

Query: 592  THHSLPTTIDIEAHIAESCKIVSSSYGVFKKKASEQGWMMSDSLLNPGRA 443
             ++       +EAHIAESCK+VSS YG FK KA+EQGW MSDSLLNPGRA
Sbjct: 472  ANY-------LEAHIAESCKMVSSLYGSFKNKAAEQGWRMSDSLLNPGRA 514


>ref|XP_004133736.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus]
            gi|449478104|ref|XP_004155224.1| PREDICTED: UPF0420
            protein C16orf58 homolog [Cucumis sativus]
          Length = 507

 Score =  637 bits (1643), Expect = e-180
 Identities = 335/521 (64%), Positives = 393/521 (75%), Gaps = 13/521 (2%)
 Frame = -2

Query: 1966 MPPLHRIKQQXXXXXSAVVTQTQDAHQLLVRETLRISANLAS-------------SSHAP 1826
            M P++ +KQ       +V + T+   ++LVRETLR++ANLAS             + HA 
Sbjct: 1    MAPIN-LKQSPNSAAKSVASSTEA--RILVRETLRVTANLASPPLDSLPPTTSPAAPHAT 57

Query: 1825 ASEIKDAQFINSSLRVICCEELDGRRWKYVAETDTXXXXXXXXXXXXXXXXXXSLQAPQP 1646
               I D  F++S+ R+ICCEE+DGRRW YVA+                      LQ PQ 
Sbjct: 58   NLPILDNHFLDSTSRLICCEEIDGRRWNYVADIQPSGKLKNASIRALC------LQTPQA 111

Query: 1645 PIDHFMSFIRSYVVPEGFPDSVSTSYVPYMKWRALKHFFGGAMGVFTTQALLSSVGLSRD 1466
            PID  MSFIRSYVVPEGFPDSV+ SYVPYM WRALKHFFGGAMGVFTTQ LL+SVG++R+
Sbjct: 112  PIDEMMSFIRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGVARN 171

Query: 1465 RATSGAVAINWILKDGAGRIGKMLFARQGKKFDYDLKQLRFSGDLLMELGAGVELATALV 1286
            +AT GA+AINWILKDGAGR+GKMLFARQGKKFDYDLKQLRF+GDLLMELGAGVELATA  
Sbjct: 172  KATPGAIAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAA 231

Query: 1285 PHLFLPLXXXXXXXXXXXXVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGL 1106
            PHLFLPL            VTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGL
Sbjct: 232  PHLFLPLACAANVAKNVSAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGL 291

Query: 1105 SIMISKKNPSLVSTFTLLSCGYILSSYNEVKSVVLRTLNRARFTVAVESFLETGDVPSLQ 926
            SIMISK+NPSLV+TF LLSCGYI SSY EV+SVVL TLNRARF VAVE+FL+TG VPSLQ
Sbjct: 292  SIMISKRNPSLVTTFGLLSCGYIFSSYQEVRSVVLHTLNRARFNVAVETFLKTGRVPSLQ 351

Query: 925  VGNMRESVFTFPWSKNRPIVIGSRFKDAFQEPDSYLTIEPLFNNERYIVTYNPLKGNIYA 746
             GNM E + +FPW K  PIV+G RFKDAFQ+  S+L IEPLF+ E+Y+VTYN  KG +YA
Sbjct: 352  KGNMNERILSFPWLKENPIVLGPRFKDAFQDAGSFLAIEPLFDREKYLVTYNQTKGKVYA 411

Query: 745  LLKDKAKSDDILKAAYHAHVLLHFIRXXXXXXXXXXXHNRNDLLDFIESLSTHHSLPTTI 566
            LLKD+AKSDDI+KAA+HAHVLLHFIR             +N     +++ S+  S+PTT 
Sbjct: 412  LLKDQAKSDDIIKAAFHAHVLLHFIRSSSGA--------QNSNQKQVDAFSS--SVPTTT 461

Query: 565  DIEAHIAESCKIVSSSYGVFKKKASEQGWMMSDSLLNPGRA 443
            ++EA IA SCK+VS+SY +FK KASEQGW+M++SLLNPG+A
Sbjct: 462  NLEAEIAASCKMVSNSYEIFKSKASEQGWVMAESLLNPGKA 502


>ref|XP_002865759.1| EMB1879 [Arabidopsis lyrata subsp. lyrata]
            gi|297311594|gb|EFH42018.1| EMB1879 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 499

 Score =  625 bits (1611), Expect = e-176
 Identities = 322/508 (63%), Positives = 391/508 (76%), Gaps = 6/508 (1%)
 Frame = -2

Query: 1948 IKQQXXXXXSAVVTQTQDAHQLLVRETLRISANLASSS------HAPASEIKDAQFINSS 1787
            +K +       + + + D+ +LL RETLRISA+LAS        H+P S   D+QF++S+
Sbjct: 4    VKLKHHSPPDTISSSSSDSVRLLSRETLRISASLASPPVDDLPPHSPPSP--DSQFLHST 61

Query: 1786 LRVICCEELDGRRWKYVAETDTXXXXXXXXXXXXXXXXXXSLQAPQPPIDHFMSFIRSYV 1607
            LR+ICCEE+DGRR+KYVAE+D                   SL++PQ P D   SF+RSYV
Sbjct: 62   LRLICCEEIDGRRFKYVAESD------GSGRFKKNSVRAISLESPQTPFDEVGSFLRSYV 115

Query: 1606 VPEGFPDSVSTSYVPYMKWRALKHFFGGAMGVFTTQALLSSVGLSRDRATSGAVAINWIL 1427
            VPEGFP SV+ SYVPYM WRALKHFFGGAMGVFTTQ LL+SVG SR+ + S AVAINWIL
Sbjct: 116  VPEGFPGSVNESYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGASRNSSASAAVAINWIL 175

Query: 1426 KDGAGRIGKMLFARQGKKFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXX 1247
            KDGAGR+GKMLFARQGKKFDYDLKQLRF+GDLLMELGAGVELATA VPHLFLPL      
Sbjct: 176  KDGAGRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANV 235

Query: 1246 XXXXXXVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISKKNPSLVS 1067
                  VTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL+GTG SI+ISK+NPSLV+
Sbjct: 236  VKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLMGTGFSILISKRNPSLVT 295

Query: 1066 TFTLLSCGYILSSYNEVKSVVLRTLNRARFTVAVESFLETGDVPSLQVGNMRESVFTFPW 887
            TF LLSCGY++SSY EV+SVVL TLNRARFTVAVESFL+TG VPSLQ GN++E +FTFPW
Sbjct: 296  TFGLLSCGYLMSSYQEVRSVVLHTLNRARFTVAVESFLKTGRVPSLQEGNIQEKIFTFPW 355

Query: 886  SKNRPIVIGSRFKDAFQEPDSYLTIEPLFNNERYIVTYNPLKGNIYALLKDKAKSDDILK 707
              +RP+++G+RFKDAFQ+P +Y+ ++P F+ ERY+VTY+P KG +YALLK +A SDDILK
Sbjct: 356  VDDRPVMLGARFKDAFQDPSTYMAVKPFFDKERYMVTYSPTKGKVYALLKHQANSDDILK 415

Query: 706  AAYHAHVLLHFIRXXXXXXXXXXXHNRNDLLDFIESLSTHHSLPTTIDIEAHIAESCKIV 527
            AA+HAHVLLHF+             +++     +E L    + PT  ++E+ IAESC++V
Sbjct: 416  AAFHAHVLLHFMN-----------QSKDGTPRLVEQLDPAFA-PTEYELESRIAESCEMV 463

Query: 526  SSSYGVFKKKASEQGWMMSDSLLNPGRA 443
            S+SY +FK +A+EQGW MS+SLLNPGRA
Sbjct: 464  STSYAIFKSRAAEQGWRMSESLLNPGRA 491


>ref|NP_568713.1| uncharacterized protein [Arabidopsis thaliana]
            gi|16604643|gb|AAL24114.1| unknown protein [Arabidopsis
            thaliana] gi|23296703|gb|AAN13151.1| unknown protein
            [Arabidopsis thaliana] gi|332008476|gb|AED95859.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 497

 Score =  623 bits (1607), Expect = e-176
 Identities = 323/495 (65%), Positives = 386/495 (77%), Gaps = 6/495 (1%)
 Frame = -2

Query: 1909 TQTQDAHQLLVRETLRISANLASSS------HAPASEIKDAQFINSSLRVICCEELDGRR 1748
            T   D+ +LL RETLRISA+LAS        H+P     D+QF++S+LR+ICCEE+DGRR
Sbjct: 14   TIASDSVRLLSRETLRISASLASPPVDDLPPHSPPPP--DSQFLHSTLRLICCEEIDGRR 71

Query: 1747 WKYVAETDTXXXXXXXXXXXXXXXXXXSLQAPQPPIDHFMSFIRSYVVPEGFPDSVSTSY 1568
            +KYVAE+D                   SL++PQ P D   SF+RSYVVPEGFP SV+ SY
Sbjct: 72   FKYVAESD------GSGRFKKNSVRAISLESPQTPFDEVGSFLRSYVVPEGFPGSVNESY 125

Query: 1567 VPYMKWRALKHFFGGAMGVFTTQALLSSVGLSRDRATSGAVAINWILKDGAGRIGKMLFA 1388
            VPYM WRALKHFFGGAMGVFTTQ LL+SVG SR+ + S AVAINWILKDGAGR+GKMLFA
Sbjct: 126  VPYMTWRALKHFFGGAMGVFTTQTLLNSVGASRNSSASAAVAINWILKDGAGRVGKMLFA 185

Query: 1387 RQGKKFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXXXXVTSTSTR 1208
            RQGKKFDYDLKQLRF+GDLLMELGAGVELATA VPHLFLPL            VTSTSTR
Sbjct: 186  RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVVKNVAAVTSTSTR 245

Query: 1207 TPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISKKNPSLVSTFTLLSCGYILSS 1028
            TPIYKAFAKGENIGDVTAKGECVGNIADL+GTG SI+ISK+NPSLV+TF LLSCGY++SS
Sbjct: 246  TPIYKAFAKGENIGDVTAKGECVGNIADLMGTGFSILISKRNPSLVTTFGLLSCGYLMSS 305

Query: 1027 YNEVKSVVLRTLNRARFTVAVESFLETGDVPSLQVGNMRESVFTFPWSKNRPIVIGSRFK 848
            Y EV+SVVL TLNRARFTVAVESFL+TG VPSLQ GN++E +FTFPW  +RP+++G+RFK
Sbjct: 306  YQEVRSVVLHTLNRARFTVAVESFLKTGRVPSLQEGNIQEKIFTFPWVDDRPVMLGARFK 365

Query: 847  DAFQEPDSYLTIEPLFNNERYIVTYNPLKGNIYALLKDKAKSDDILKAAYHAHVLLHFIR 668
            DAFQ+P +Y+ ++P F+ ERY+VTY+P KG +YALLK +A SDDILKAA+HAHVLLHF+ 
Sbjct: 366  DAFQDPSTYMAVKPFFDKERYMVTYSPTKGKVYALLKHQANSDDILKAAFHAHVLLHFMN 425

Query: 667  XXXXXXXXXXXHNRNDLLDFIESLSTHHSLPTTIDIEAHIAESCKIVSSSYGVFKKKASE 488
                        +++     +E L    + PT  ++E+ IAESC++VS+SYGVFK +A+E
Sbjct: 426  -----------QSKDGNPRSVEQLDPAFA-PTEYELESRIAESCEMVSTSYGVFKSRAAE 473

Query: 487  QGWMMSDSLLNPGRA 443
            QGW MS+SLLNPGRA
Sbjct: 474  QGWRMSESLLNPGRA 488


Top