BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003764
         (4189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACV87353.1| phytochrome A [Aquilegia formosa]                     1935   0.0  
gb|ACC60969.1| phytochrome A [Vitis riparia]                         1813   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1811   0.0  
ref|XP_002318913.1| phytochrome [Populus trichocarpa] gi|2228572...  1773   0.0  
ref|XP_002512596.1| phytochrome A, putative [Ricinus communis] g...  1770   0.0  

>gb|ACV87353.1| phytochrome A [Aquilegia formosa]
          Length = 1130

 Score = 1936 bits (5014), Expect = 0.0
 Identities = 957/1102 (86%), Positives = 1033/1102 (93%), Gaps = 1/1102 (0%)
 Frame = +1

Query: 457  VIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNTGSVQQQPKSDKVTTAYLHQIQKGKHIQ 636
            VIAQTTVDAKLHA+FEE+GSSFDYSR+V V+N+ +  QQ +SDKVTTAYLHQIQKGK IQ
Sbjct: 22   VIAQTTVDAKLHAEFEETGSSFDYSRSVSVTNSSN--QQTRSDKVTTAYLHQIQKGKQIQ 79

Query: 637  PFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFTSPSASAL 816
            PFGCLLALD+KTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTD++TI TSPSASAL
Sbjct: 80   PFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLKTILTSPSASAL 139

Query: 817  QKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAGALQSY 996
            QKAL F+DV+LLNPILVHCK+SGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAGALQSY
Sbjct: 140  QKALAFSDVTLLNPILVHCKSSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 199

Query: 997  KLAAKAITRLQSLPGGSMERLCDALVQEVYELTGYDRVMAYKFHEDDHGEVVSEVTKEGL 1176
            KLAAKAI RLQSLP GS++RLCD +V+EV++LTGYDRVM YKFH+DDHGEVVSE TKEGL
Sbjct: 200  KLAAKAIARLQSLPSGSIDRLCDTVVEEVFQLTGYDRVMVYKFHDDDHGEVVSETTKEGL 259

Query: 1177 EPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSALRAPH 1356
             PYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKL F+LTLCGS LRAPH
Sbjct: 260  PPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLPFELTLCGSTLRAPH 319

Query: 1357 SCHLQYMENMDSIASLVMAVVVNDGDEDDESTR-PSQPQKRKRLWGLVVCHNTTPRFVPF 1533
            SCHLQYMENMDSIASLVMAVV+NDGDE++ +    SQ QKRKRLWGLVVCHNTTPRFVPF
Sbjct: 320  SCHLQYMENMDSIASLVMAVVINDGDEEEGTVEGASQSQKRKRLWGLVVCHNTTPRFVPF 379

Query: 1534 PLRYACEFLIQVFAIHVSKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSPNIMD 1713
            PLRYACEFLIQVFAIHV+KEFELENQILEKNILRTQTLLCDMLMRN P+GIVSQSPNIMD
Sbjct: 380  PLRYACEFLIQVFAIHVNKEFELENQILEKNILRTQTLLCDMLMRNAPIGIVSQSPNIMD 439

Query: 1714 LVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDYHMDSTGLSSDSLYDAGFPGALSI 1893
            LVKCDGAALLY+NKIWRLG SP+E  IRDIASWLS+YHMDSTGLS+DSLYDAGFPGALSI
Sbjct: 440  LVKCDGAALLYQNKIWRLGLSPSESHIRDIASWLSEYHMDSTGLSTDSLYDAGFPGALSI 499

Query: 1894 ADTVCGMAAVRINSKDMLFWFRSHSAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAFLEVV 2073
             DTVCGMAAVRINSKDMLFWFRSH+A E+RWGGAKH+PGEKDDGRKMHPRSSFKAFLEVV
Sbjct: 500  GDTVCGMAAVRINSKDMLFWFRSHTAGEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVV 559

Query: 2074 KTRSAPWKDYEMDAIHSLQLILRSAFKDIETADGNTKAIHSQLDNLKINGMEELEAVTNE 2253
            KTRS PWKD+EMDAIHSLQLILR+ FKDIETADGNT  IHSQLD LKI+GMEELEAVTNE
Sbjct: 560  KTRSFPWKDFEMDAIHSLQLILRNTFKDIETADGNTNVIHSQLDKLKIDGMEELEAVTNE 619

Query: 2254 MVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGSSVDTVKRML 2433
            MVRLIETATVPILAVDINGLINGWNTKIAELTGLPVD+VIGKHFLKLVE SS +TVKRML
Sbjct: 620  MVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDQVIGKHFLKLVEESSAETVKRML 679

Query: 2434 HLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITSQKMV 2613
            HLAL+GKEEQNVHFEMKTHGS+K+ GPVSLVVNACASRDLQENVVGVCFVA D+T+QKMV
Sbjct: 680  HLALLGKEEQNVHFEMKTHGSKKDSGPVSLVVNACASRDLQENVVGVCFVAHDLTNQKMV 739

Query: 2614 MDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKMLLGE 2793
            MDKFTRIEGDYKAILQNPSPL PPIFG+DEFGWCCEWNPAMTKLSGW+R+E+MDKMLLGE
Sbjct: 740  MDKFTRIEGDYKAILQNPSPLYPPIFGTDEFGWCCEWNPAMTKLSGWDRAEVMDKMLLGE 799

Query: 2794 IFGTHMASCRLKNQETFVNLGIVLNGAMMGEETEKVSFGFFGRNGNYVDCLLSVSKKVDG 2973
            IFGT+M+ CRLKNQETFVNLGIVLNGAMMGEET+KVSFGFFGRNGNYVDCLLSV+KKVDG
Sbjct: 800  IFGTNMSCCRLKNQETFVNLGIVLNGAMMGEETDKVSFGFFGRNGNYVDCLLSVTKKVDG 859

Query: 2974 EGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSKALAYMKRQIRNPLSGIIFSRKML 3153
            EG VTGVFCFL  VS+ELQQALHVQRLSEQ+A++KSK L YMKRQIRNPLSGIIFS KM+
Sbjct: 860  EGVVTGVFCFLHTVSQELQQALHVQRLSEQSALQKSKGLTYMKRQIRNPLSGIIFSGKMM 919

Query: 3154 EETDLGEEQKQLLHTSMHCQRQLHKVLDDTDLENIMDGYVDLEMVEFTLQEVLFTSISQV 3333
              TDL EEQKQLLHTSMHCQRQLHKVL+DTDLE IMDGYVD +M+EFTL+EVL T ISQV
Sbjct: 920  GGTDLDEEQKQLLHTSMHCQRQLHKVLEDTDLERIMDGYVDSKMIEFTLREVLITCISQV 979

Query: 3334 KIKCDEKSLRISCDSLDEIMTEIFYGDRLRLQQVLADFILVSVKFTPTGGQLGISASLTR 3513
            KI+ D +SLR + DSL++ MTE  YGD LRLQQVLADF+LVSVKFTP GGQ+GISASLTR
Sbjct: 980  KIESDRRSLRFTNDSLEDFMTETLYGDSLRLQQVLADFMLVSVKFTPKGGQIGISASLTR 1039

Query: 3514 DRLGESVHLALLKLRLTHSGGGIAEELLSEMFESDSDTSEDGISLLVCRKLLKLMNGDVQ 3693
            +RLGESVHLA L+LRLTHSGGGI EELLS MFESDS+ SE+G+SLLVCRKLLK+MNGDVQ
Sbjct: 1040 NRLGESVHLAHLELRLTHSGGGIPEELLSHMFESDSEASEEGVSLLVCRKLLKVMNGDVQ 1099

Query: 3694 YLREAGKSSFIISVEFASAPKA 3759
            YLREAGKSSFII VE ASA K+
Sbjct: 1100 YLREAGKSSFIIPVELASASKS 1121


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score = 1813 bits (4695), Expect = 0.0
 Identities = 886/1100 (80%), Positives = 997/1100 (90%)
 Frame = +1

Query: 457  VIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNTGSVQQQPKSDKVTTAYLHQIQKGKHIQ 636
            +IAQTTVDAKLHA FEESGSSFDYS +V  +  G   QQP+SDKVTTAYLH IQKGK IQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGG-DQQPRSDKVTTAYLHHIQKGKLIQ 80

Query: 637  PFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFTSPSASAL 816
            PFG LLALDDKT KVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIF+ PSASAL
Sbjct: 81   PFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSASAL 140

Query: 817  QKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAGALQSY 996
             KALGF +VSLLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAGALQSY
Sbjct: 141  HKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 200

Query: 997  KLAAKAITRLQSLPGGSMERLCDALVQEVYELTGYDRVMAYKFHEDDHGEVVSEVTKEGL 1176
            KLAAKAITRLQSLP GS+ERLCD +VQEV+ELTGYDRVMAYKFH+DDHGEVVSE+TK GL
Sbjct: 201  KLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGL 260

Query: 1177 EPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSALRAPH 1356
            EPYLGLHYPATDIPQAARFLFMKNK+RMICDCRAKH++VLQDEKL FDLTLCGS LRAPH
Sbjct: 261  EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPH 320

Query: 1357 SCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNTTPRFVPFP 1536
            SCH+QYMENM+SIASLVMAVVVNDGDE+ ES+   QPQKRKRLWGLVVCH+TTPRFVPFP
Sbjct: 321  SCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPFP 380

Query: 1537 LRYACEFLIQVFAIHVSKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSPNIMDL 1716
            LRYACEFL QVFAIHV+KE ELE+QILEKNILRTQTLLCDMLMR+ PLGIVSQSPN+MDL
Sbjct: 381  LRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDL 440

Query: 1717 VKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDYHMDSTGLSSDSLYDAGFPGALSIA 1896
            VKCDGAALLYKNK+WRLG +P++ Q+ DI SWLS+YHMDSTGLS+DSLYDAG+PGAL++ 
Sbjct: 441  VKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALALG 500

Query: 1897 DTVCGMAAVRINSKDMLFWFRSHSAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVK 2076
            D VCGMAAV+I SKD LFWFRSH+AAEVRWGGAKH+PGEKDDGRKMHPRSSFKAFLEVVK
Sbjct: 501  DAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVK 560

Query: 2077 TRSAPWKDYEMDAIHSLQLILRSAFKDIETADGNTKAIHSQLDNLKINGMEELEAVTNEM 2256
            TRS PWKDYEMDAIHSLQLILR+AFKD E  D NT AIH++L++LKI GM+ELEAVT+EM
Sbjct: 561  TRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTSEM 620

Query: 2257 VRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGSSVDTVKRMLH 2436
            VRLIETA+VPILAVD++GL+NGWNTKI+ELT LPVD+ IG H L LVE SS DTVK+MLH
Sbjct: 621  VRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTVKKMLH 680

Query: 2437 LALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITSQKMVM 2616
            LAL G+EEQNV FE+KTHGS+++ GP+SLVVNACASRDL ENVVGVCFVAQDITSQK VM
Sbjct: 681  LALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLDENVVGVCFVAQDITSQKTVM 740

Query: 2617 DKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKMLLGEI 2796
            DKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWNPAM KLSGW R E+MDKMLLGE+
Sbjct: 741  DKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLGEV 800

Query: 2797 FGTHMASCRLKNQETFVNLGIVLNGAMMGEETEKVSFGFFGRNGNYVDCLLSVSKKVDGE 2976
            FGTHMA CRLKN+E FV LGIVLN  M G E+EKVSFGFF ++G YV+CLLSVSKK+D E
Sbjct: 801  FGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKLDRE 860

Query: 2977 GAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSKALAYMKRQIRNPLSGIIFSRKMLE 3156
            GAVTGVFCFLQ+ S+ELQQALH+QRLSEQTA+K+ KALAY+KRQI+NPLSGIIFSRKM+E
Sbjct: 861  GAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRKMME 920

Query: 3157 ETDLGEEQKQLLHTSMHCQRQLHKVLDDTDLENIMDGYVDLEMVEFTLQEVLFTSISQVK 3336
            +TDLGEEQ+Q+LHTS  CQRQL K+LDD DL++I++GY+DLEMVEFTL+EVL  SISQV 
Sbjct: 921  DTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLVASISQVM 980

Query: 3337 IKCDEKSLRISCDSLDEIMTEIFYGDRLRLQQVLADFILVSVKFTPTGGQLGISASLTRD 3516
            IK + K ++I  D+ + IMTE  YGD LRLQQVLADF+L+SV FTP GGQL ++ASL +D
Sbjct: 981  IKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLSVAASLIKD 1040

Query: 3517 RLGESVHLALLKLRLTHSGGGIAEELLSEMFESDSDTSEDGISLLVCRKLLKLMNGDVQY 3696
            RLGESVHL  L+LR+TH+G G+ E+LL++MF ++ D SE+GISLL+ RKL+KLMNGDVQY
Sbjct: 1041 RLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLISRKLVKLMNGDVQY 1100

Query: 3697 LREAGKSSFIISVEFASAPK 3756
            LREAGKS+FIIS+E A+A K
Sbjct: 1101 LREAGKSTFIISIELAAARK 1120


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1811 bits (4691), Expect = 0.0
 Identities = 885/1100 (80%), Positives = 997/1100 (90%)
 Frame = +1

Query: 457  VIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNTGSVQQQPKSDKVTTAYLHQIQKGKHIQ 636
            +IAQTTVDAKLHA FEESGSSFDYS +V  +  G   QQP+SDKVTTAYLH IQKGK IQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGG-DQQPRSDKVTTAYLHHIQKGKLIQ 80

Query: 637  PFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFTSPSASAL 816
            PFG LLALD+KT KVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIF+ PSASAL
Sbjct: 81   PFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSASAL 140

Query: 817  QKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAGALQSY 996
             KALGF +VSLLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAGALQSY
Sbjct: 141  HKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 200

Query: 997  KLAAKAITRLQSLPGGSMERLCDALVQEVYELTGYDRVMAYKFHEDDHGEVVSEVTKEGL 1176
            KLAAKAITRLQSLP GS+ERLCD +VQEV+ELTGYDRVMAYKFH+DDHGEVVSE+TK GL
Sbjct: 201  KLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGL 260

Query: 1177 EPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSALRAPH 1356
            EPYLGLHYPATDIPQAARFLFMKNK+RMICDCRAKH++VLQDEKL FDLTLCGS LRAPH
Sbjct: 261  EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPH 320

Query: 1357 SCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNTTPRFVPFP 1536
            SCH+QYMENM+SIASLVMAVVVNDGDE+ ES+   QPQKRKRLWGLVVCH+TTPRFVPFP
Sbjct: 321  SCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPFP 380

Query: 1537 LRYACEFLIQVFAIHVSKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSPNIMDL 1716
            LRYACEFL QVFAIHV+KE ELE+QILEKNILRTQTLLCDMLMR+ PLGIVSQSPN+MDL
Sbjct: 381  LRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDL 440

Query: 1717 VKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDYHMDSTGLSSDSLYDAGFPGALSIA 1896
            VKCDGAALLYKNK+WRLG +P++ Q+ DI SWLS+YHMDSTGLS+DSLYDAG+PGAL++ 
Sbjct: 441  VKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALALG 500

Query: 1897 DTVCGMAAVRINSKDMLFWFRSHSAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVK 2076
            D VCGMAAV+I SKD LFWFRSH+AAEVRWGGAKH+PGEKDDGRKMHPRSSFKAFLEVVK
Sbjct: 501  DAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVK 560

Query: 2077 TRSAPWKDYEMDAIHSLQLILRSAFKDIETADGNTKAIHSQLDNLKINGMEELEAVTNEM 2256
            TRS PWKDYEMDAIHSLQLILR+AFKD E  D NT AIH++L++LKI GM+ELEAVT+EM
Sbjct: 561  TRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTSEM 620

Query: 2257 VRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGSSVDTVKRMLH 2436
            VRLIETA+VPILAVD++GL+NGWNTKI+ELT LPVD+ IG H L LVE SS DTVK+MLH
Sbjct: 621  VRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTVKKMLH 680

Query: 2437 LALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITSQKMVM 2616
            LAL G+EEQNV FE+KTHGS+++ GP+SLVVNACASRDL ENVVGVCFVAQDITSQK VM
Sbjct: 681  LALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHENVVGVCFVAQDITSQKTVM 740

Query: 2617 DKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKMLLGEI 2796
            DKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWNPAM KLSGW R E+MDKMLLGE+
Sbjct: 741  DKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLGEV 800

Query: 2797 FGTHMASCRLKNQETFVNLGIVLNGAMMGEETEKVSFGFFGRNGNYVDCLLSVSKKVDGE 2976
            FGTHMA CRLKN+E FV LGIVLN  M G E+EKVSFGFF ++G YV+CLLSVSKK+D E
Sbjct: 801  FGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKLDRE 860

Query: 2977 GAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSKALAYMKRQIRNPLSGIIFSRKMLE 3156
            GAVTGVFCFLQ+ S+ELQQALH+QRLSEQTA+K+ KALAY+KRQI+NPLSGIIFSRKM+E
Sbjct: 861  GAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRKMME 920

Query: 3157 ETDLGEEQKQLLHTSMHCQRQLHKVLDDTDLENIMDGYVDLEMVEFTLQEVLFTSISQVK 3336
            +TDLGEEQ+Q+LHTS  CQRQL K+LDD DL++I++GY+DLEMVEFTL+EVL  SISQV 
Sbjct: 921  DTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLVASISQVM 980

Query: 3337 IKCDEKSLRISCDSLDEIMTEIFYGDRLRLQQVLADFILVSVKFTPTGGQLGISASLTRD 3516
            IK + K ++I  D+ + IMTE  YGD LRLQQVLADF+L+SV FTP GGQL ++ASL +D
Sbjct: 981  IKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLSVAASLIKD 1040

Query: 3517 RLGESVHLALLKLRLTHSGGGIAEELLSEMFESDSDTSEDGISLLVCRKLLKLMNGDVQY 3696
            RLGESVHL  L+LR+TH+G G+ E+LL++MF ++ D SE+GISLL+ RKL+KLMNGDVQY
Sbjct: 1041 RLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLISRKLVKLMNGDVQY 1100

Query: 3697 LREAGKSSFIISVEFASAPK 3756
            LREAGKS+FIIS+E A+A K
Sbjct: 1101 LREAGKSTFIISIELAAARK 1120


>ref|XP_002318913.1| phytochrome [Populus trichocarpa] gi|222857289|gb|EEE94836.1|
            phytochrome [Populus trichocarpa]
          Length = 1126

 Score = 1773 bits (4593), Expect = 0.0
 Identities = 867/1102 (78%), Positives = 983/1102 (89%)
 Frame = +1

Query: 457  VIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNTGSVQQQPKSDKVTTAYLHQIQKGKHIQ 636
            +IAQTTVDAKLHA FEESGSSFDYS +V V+++    Q P+SDKVTT YLH IQKGK IQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTTYLHHIQKGKLIQ 81

Query: 637  PFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFTSPSASAL 816
            PFGCLLALD+KT KV+AYSENAPE+LTMVSHAVPSVGEHPVLGIGTD+RTIFT+PSASAL
Sbjct: 82   PFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSASAL 141

Query: 817  QKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAGALQSY 996
            QKA+GF DVSLLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAGALQSY
Sbjct: 142  QKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 997  KLAAKAITRLQSLPGGSMERLCDALVQEVYELTGYDRVMAYKFHEDDHGEVVSEVTKEGL 1176
            KLAAKAITRLQSLP GSMERLCD +VQEV+ELTGYDR MAYKFH+DDHGEVVSEVTK G+
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGM 261

Query: 1177 EPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSALRAPH 1356
            EPYLGLHYPATDIPQA+RFLFMKNK+RMI DC AKHV+VLQDEKL FDLTLCGS LRAPH
Sbjct: 262  EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPH 321

Query: 1357 SCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNTTPRFVPFP 1536
            SCHLQYMENM+SIASLVMAVVVNDGDED ++     PQKRKRLWGLVVCHNT+PRFVPFP
Sbjct: 322  SCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPRFVPFP 381

Query: 1537 LRYACEFLIQVFAIHVSKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSPNIMDL 1716
            LRYACEFL QVFAIHV+KE ELENQI+EKNILRTQTLLCDMLMR+ PLGIV+QSPNIMDL
Sbjct: 382  LRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 441

Query: 1717 VKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDYHMDSTGLSSDSLYDAGFPGALSIA 1896
            VKCDGA L Y+NKIWRLG +P+++Q++DIA WLS+YHMDSTGLS+DSLYDAG+PGAL++ 
Sbjct: 442  VKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALALG 501

Query: 1897 DTVCGMAAVRINSKDMLFWFRSHSAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVK 2076
            D VCGMAAVRI SKDMLFWFRS +AAE+RWGGAKH+PGEKDDGR+MHPRSSFKAFLEVVK
Sbjct: 502  DVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEVVK 561

Query: 2077 TRSAPWKDYEMDAIHSLQLILRSAFKDIETADGNTKAIHSQLDNLKINGMEELEAVTNEM 2256
            TRS PWKDYEMDAIHSLQLILR+AFKDIET D +TK IH++L +LKI GM+ELEAVT+EM
Sbjct: 562  TRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTSEM 621

Query: 2257 VRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGSSVDTVKRMLH 2436
            VRLIETATVPILAVD++GL+NGWNTKI+ELTGL VD+ IGKH L LVE SSVD VKRML 
Sbjct: 622  VRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRMLF 681

Query: 2437 LALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITSQKMVM 2616
            LAL GKEEQN+ FE+KTHGS+ E GP+ LVVNACASRDL ENVVGVCFV QDIT QKMVM
Sbjct: 682  LALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKMVM 741

Query: 2617 DKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKMLLGEI 2796
            DKFTRIEGDYKAI+QN +PLIPPIFG+DEFGWC EWNPAMT L+GW+R E++DKMLLGE+
Sbjct: 742  DKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLGEV 801

Query: 2797 FGTHMASCRLKNQETFVNLGIVLNGAMMGEETEKVSFGFFGRNGNYVDCLLSVSKKVDGE 2976
            FG +MA CRLKNQE FVNLG+VLN AM G+E+EKVSFGFF R G YV+CLL VSKK+D E
Sbjct: 802  FGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLDRE 861

Query: 2977 GAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSKALAYMKRQIRNPLSGIIFSRKMLE 3156
            GAVTGVFCFLQ+ S+ELQQALHVQRLSEQTA+K+ KALAY+KRQI NPLSGIIFS KM+E
Sbjct: 862  GAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKRQIWNPLSGIIFSGKMME 921

Query: 3157 ETDLGEEQKQLLHTSMHCQRQLHKVLDDTDLENIMDGYVDLEMVEFTLQEVLFTSISQVK 3336
             T+LG EQK+LLHTS  CQ QL K+LDD+DL++I++GY+DLEMVEFTL+EVL  + SQV 
Sbjct: 922  GTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREVLVAATSQVM 981

Query: 3337 IKCDEKSLRISCDSLDEIMTEIFYGDRLRLQQVLADFILVSVKFTPTGGQLGISASLTRD 3516
            +K +EK +RI  D+ +E M E  YGD +RLQQVLADF+ +SV FTP+GG L +SASLT+D
Sbjct: 982  MKSNEKGIRIINDAAEETMAETLYGDSIRLQQVLADFLQMSVNFTPSGGLLSVSASLTKD 1041

Query: 3517 RLGESVHLALLKLRLTHSGGGIAEELLSEMFESDSDTSEDGISLLVCRKLLKLMNGDVQY 3696
            +LG+SV+L  L+LR+ H G GI E LL +MF  D+D S +GISL++ RKL+KLMNGDV+Y
Sbjct: 1042 QLGQSVYLVHLELRIRHPGAGIPEALLDQMFGEDTDASVEGISLVISRKLVKLMNGDVRY 1101

Query: 3697 LREAGKSSFIISVEFASAPKAQ 3762
            +REAGKSSFIISVE A   K+Q
Sbjct: 1102 MREAGKSSFIISVELAGGHKSQ 1123


>ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
            gi|223548557|gb|EEF50048.1| phytochrome A, putative
            [Ricinus communis]
          Length = 1124

 Score = 1770 bits (4585), Expect = 0.0
 Identities = 863/1102 (78%), Positives = 978/1102 (88%)
 Frame = +1

Query: 457  VIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNTGSVQQQPKSDKVTTAYLHQIQKGKHIQ 636
            +I+QT VDAKLHA FEESGSSFDYS +V V+++  +   P+SDKVTTAYLH IQKGK IQ
Sbjct: 22   IISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQKGKLIQ 81

Query: 637  PFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFTSPSASAL 816
            PFGCLLALD+KT KVIAYSENAPEMLTMVSHAVPSVG+HPVLGIGTD+RTIFT+PSASAL
Sbjct: 82   PFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAPSASAL 141

Query: 817  QKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAGALQSY 996
            QKALGF DVSLLNPILVHCKTSGKPFYAI HRVTGS IIDFEPVKPYE+PMTAAGALQSY
Sbjct: 142  QKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAGALQSY 201

Query: 997  KLAAKAITRLQSLPGGSMERLCDALVQEVYELTGYDRVMAYKFHEDDHGEVVSEVTKEGL 1176
            KLAAKAI+RLQSLP GSMERLCD +VQEV+ELTGYDRVM YKFH+DDHGEV+SEVTK GL
Sbjct: 202  KLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEVTKPGL 261

Query: 1177 EPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSALRAPH 1356
            EPYLGLHYPATDIPQAARFLFMKNK+RMI DCRAKHV+VLQDEKL  +LTLCGS LRAPH
Sbjct: 262  EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGSTLRAPH 321

Query: 1357 SCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNTTPRFVPFP 1536
            SCHLQYMENMDS+ASLVMAVVVN+GDEDD+S    QPQKRKRLWGLVVCHNTTPRFVPFP
Sbjct: 322  SCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPRFVPFP 381

Query: 1537 LRYACEFLIQVFAIHVSKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSPNIMDL 1716
            LRYACEFL QVFAIHV+KE ELENQI+EKNILRTQTLLCDML+R+ PLGI++QSPNI DL
Sbjct: 382  LRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRDAPLGILTQSPNITDL 441

Query: 1717 VKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDYHMDSTGLSSDSLYDAGFPGALSIA 1896
            VKCDGAALLYKNKIWRLG +P+++QIRDIA WLS+YHMDSTGLS+DSLYDAG+  ALS+ 
Sbjct: 442  VKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYSAALSLE 501

Query: 1897 DTVCGMAAVRINSKDMLFWFRSHSAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVK 2076
            D VCGMAAVRI SKDMLFWFR+ +AAE+RWGGAKH+PGEKDDGRKMHPRSSFKAFLEVVK
Sbjct: 502  DVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVK 561

Query: 2077 TRSAPWKDYEMDAIHSLQLILRSAFKDIETADGNTKAIHSQLDNLKINGMEELEAVTNEM 2256
            TRS PWKDYEMDAIHSLQLILR+AFKD ET D + KAIHS+L +LKI GM+ELEAVT+EM
Sbjct: 562  TRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSRLSDLKIEGMQELEAVTSEM 621

Query: 2257 VRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGSSVDTVKRMLH 2436
            VRLIETATVPILAVD++GL+NGWNTKIAELTGLPVD+ IGKH L LVE  S+D VK ML 
Sbjct: 622  VRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLLTLVEDGSIDLVKNMLF 681

Query: 2437 LALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITSQKMVM 2616
             AL GKEEQN+ FE+KTHGS+ E GP+SLVVNACASRD+ ENVVGVCFVAQDIT QK VM
Sbjct: 682  SALQGKEEQNIQFEIKTHGSKVESGPISLVVNACASRDISENVVGVCFVAQDITGQKTVM 741

Query: 2617 DKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKMLLGEI 2796
            DKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWNPAM KL+GW+R E+MDKMLLGE+
Sbjct: 742  DKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWKREEVMDKMLLGEV 801

Query: 2797 FGTHMASCRLKNQETFVNLGIVLNGAMMGEETEKVSFGFFGRNGNYVDCLLSVSKKVDGE 2976
            FG + A C LKNQE FVNLG+++N AM  +  EKVSF FF RN  YV+CLL VSKK+D E
Sbjct: 802  FGINRACCCLKNQEAFVNLGVLINNAMTSQVPEKVSFSFFARNKKYVECLLCVSKKLDRE 861

Query: 2977 GAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSKALAYMKRQIRNPLSGIIFSRKMLE 3156
            GAVTGVFCFLQ+ S+ELQQALH+QRLSEQTA+K+ K LAY+KRQI+NPLSGI+FSRK++E
Sbjct: 862  GAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTLAYIKRQIQNPLSGIMFSRKLME 921

Query: 3157 ETDLGEEQKQLLHTSMHCQRQLHKVLDDTDLENIMDGYVDLEMVEFTLQEVLFTSISQVK 3336
             T+L  EQKQLLHTS  CQRQL K+LDD+D+++I++GY+DLEMVEFTL EVL  +ISQV 
Sbjct: 922  ITELDAEQKQLLHTSAQCQRQLSKILDDSDIDSIVEGYLDLEMVEFTLHEVLIAAISQVT 981

Query: 3337 IKCDEKSLRISCDSLDEIMTEIFYGDRLRLQQVLADFILVSVKFTPTGGQLGISASLTRD 3516
            IK   K +RI  D+ + IMTE  YGD +RLQQVLADF+  SV FTP GGQL I+A  T+D
Sbjct: 982  IKSKGKGIRIVNDAAEVIMTETLYGDSIRLQQVLADFLAASVDFTPPGGQLTIAAKFTKD 1041

Query: 3517 RLGESVHLALLKLRLTHSGGGIAEELLSEMFESDSDTSEDGISLLVCRKLLKLMNGDVQY 3696
            +LG+SVHL  L+LR+TH+GGGI E LL++MF SD D S++G+SL + RKL+KLMNGDVQY
Sbjct: 1042 QLGQSVHLVHLELRITHAGGGIPEPLLNQMFGSDGDVSDEGVSLFISRKLVKLMNGDVQY 1101

Query: 3697 LREAGKSSFIISVEFASAPKAQ 3762
            LREAGKSSFI++VE A+  K+Q
Sbjct: 1102 LREAGKSSFIVTVELAAGRKSQ 1123