BLASTX nr result

ID: Coptis21_contig00003763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003763
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323996.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-12
ref|XP_002521465.1| conserved hypothetical protein [Ricinus comm...    73   7e-11
ref|XP_002315674.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-09
ref|XP_002274411.1| PREDICTED: uncharacterized protein LOC100268...    69   2e-09
ref|XP_003517538.1| PREDICTED: uncharacterized protein LOC100787...    68   2e-09

>ref|XP_002323996.1| predicted protein [Populus trichocarpa] gi|222866998|gb|EEF04129.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 8/100 (8%)
 Frame = -3

Query: 501 MGFPQKCQVESV--------VVAGVSLRSPLKPISTNKKERGSSIEEEDEASTTPTAQNM 346
           MGF +K QV+S         V+AG+++R+ LKP++T  + +    +EE E STTPTA+  
Sbjct: 1   MGFSKKTQVDSGLDSEGKKWVIAGIAIRTSLKPVNTKSRVKDCDGDEE-EFSTTPTAKEA 59

Query: 345 KIPEKLXXXXXXXXXXXXXXCNFTGTRDFFCPPDLETVFK 226
           +IPE+L              CN++G R+FF PPDLETVFK
Sbjct: 60  RIPERLPCPPAPRKRRPSSRCNYSGVREFFTPPDLETVFK 99


>ref|XP_002521465.1| conserved hypothetical protein [Ricinus communis]
           gi|223539364|gb|EEF40955.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 110

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 11/103 (10%)
 Frame = -3

Query: 501 MGFPQKCQVESV--------VVAGVSLRSPLKPISTNKKERGS---SIEEEDEASTTPTA 355
           MGF +K QV+S         V+AG+++R+ LKPIST  + + S      EE++ STTPTA
Sbjct: 1   MGFSKKSQVDSGLDSEGKKWVIAGIAIRTSLKPISTRPRAKASENGDDSEEEQCSTTPTA 60

Query: 354 QNMKIPEKLXXXXXXXXXXXXXXCNFTGTRDFFCPPDLETVFK 226
           +  +IPE+L                 +G R+FF PPDLE+VFK
Sbjct: 61  KESRIPERLPCPPAPRKRRPSRCNYNSGVREFFSPPDLESVFK 103


>ref|XP_002315674.1| predicted protein [Populus trichocarpa] gi|222864714|gb|EEF01845.1|
           predicted protein [Populus trichocarpa]
          Length = 111

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
 Frame = -3

Query: 465 VVAGVSLRSPLKPISTNKKERGSSIEEEDE------ASTTPTAQNMKIPEKLXXXXXXXX 304
           V+AG+ LR+PLKPISTN  E+   I E+D+      ASTTPT++  +IP +L        
Sbjct: 23  VIAGIPLRAPLKPISTNPVEK--EINEDDDQSNCTTASTTPTSEEARIPSRLVCPPAPRK 80

Query: 303 XXXXXXCNFT-GTRDFFCPPDLETVF 229
                 CN+T G R+FF PPDLET+F
Sbjct: 81  RKATFKCNYTSGVREFFTPPDLETLF 106


>ref|XP_002274411.1| PREDICTED: uncharacterized protein LOC100268049 [Vitis vinifera]
           gi|147783376|emb|CAN59885.1| hypothetical protein
           VITISV_026167 [Vitis vinifera]
          Length = 103

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
 Frame = -3

Query: 501 MGFPQKCQVESV--------VVAGVSLRSPLKPISTNKKERGSSIEEEDEA-STTPTAQN 349
           MGF +K QV+          V+AG+S+R+PL+P+ST  +E+    E +DEA STTPT + 
Sbjct: 1   MGFSEKPQVDGSIESEGKKWVIAGISIRAPLRPVSTKPREK----ESDDEACSTTPTTKE 56

Query: 348 MKIPEKLXXXXXXXXXXXXXXCNFTGTRDFFCPPDLETVF 229
            +IPE+L              C+  G R+FF PPDLE+VF
Sbjct: 57  ARIPERL-PCPPAPRKRRPSRCHLNGVREFFTPPDLESVF 95


>ref|XP_003517538.1| PREDICTED: uncharacterized protein LOC100787501 [Glycine max]
          Length = 107

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
 Frame = -3

Query: 501 MGFPQKCQVESV------VVAGVSLRSPLKPISTNKKERGSSIEEEDEASTTPTAQNMKI 340
           MGF +K QVE        V+AG+  R+PLKPI T K+E      + +E STTP  +  KI
Sbjct: 1   MGFSEKPQVEESDSTRKWVIAGIPSRAPLKPIFTTKEEEKDEEGDLEECSTTPKGEEAKI 60

Query: 339 PEKLXXXXXXXXXXXXXXCNFT--GTRDFFCPPDLETVF 229
           P  L              CN+   G R+FF PPDLETVF
Sbjct: 61  PTTLKCPPAPRKRKPSLKCNYRGGGAREFFTPPDLETVF 99


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