BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003756
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   114   2e-23
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   113   4e-23
gb|ABK92768.1| unknown [Populus trichocarpa]                          113   4e-23
ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   111   1e-22
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...   109   6e-22

>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
           gi|223535221|gb|EEF36899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 375

 Score =  114 bits (285), Expect = 2e-23
 Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 5/231 (2%)
 Frame = +3

Query: 9   VSKGWRDLISDNSFRRLQCHRVKAVTSGFFFQDT-----WDVPYPVKYFSVKNDQAILQD 173
           VSKGW+ LI + SF ++Q  R + + SGFFFQ       +D+   + Y  VK +   L  
Sbjct: 31  VSKGWQHLIMNQSFIQIQSRRREPL-SGFFFQQRFQWSEYDIE-TINYIPVKWEGLELHK 88

Query: 174 TVLDFLPEMVELIASSNGLLCCKSYDDSNARDKLIFVCNPIKKEYVQIEWPKGTVLHQDF 353
            V DFLP+ V L+ + NGL+CC+S          IFVCNP+ KE+V+++W +    H   
Sbjct: 89  KVFDFLPQDVVLLTTCNGLVCCRSCFPFEL--PAIFVCNPLNKEWVKLDWTEPDKEH-SI 145

Query: 354 ALAFDPFCYPVDELSNFKLACVCKETLLTILLQVYSSKTKEWSKLELRVRGDNYNCVPDG 533
           ALAFDP        +NFKL     +  L     +YSS+T  W+ L   +   N N +   
Sbjct: 146 ALAFDPLLDISGNSANFKL-----DEQLYFSFDIYSSRTGSWN-LSKDICWCNSN-LHKN 198

Query: 534 QVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGE 686
           + V+  G+L+W+T  D IL FDV  E    +  PV     S    + CIGE
Sbjct: 199 KGVYIRGVLHWLTDEDQILTFDVDNELAFLISAPVPAAEFSTA-PKACIGE 248


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  113 bits (282), Expect = 4e-23
 Identities = 83/235 (35%), Positives = 122/235 (51%), Gaps = 8/235 (3%)
 Frame = +3

Query: 9   VSKGWRDLISDNSFRRLQCHRVKAVTSGFFFQDTW----DVPYPVKYFSVKNDQAILQDT 176
           VSKGW+DLISD SF + Q  + K   SGFFFQ       D    + YF V+ ++  LQ  
Sbjct: 30  VSKGWKDLISDRSFIQAQSQK-KEPLSGFFFQQRHRYCPDDIKTITYFPVERNR--LQQD 86

Query: 177 VLDFLPEMVELIASSNGLLCCKSYDDSNARDKLIFVCNPIKKEYVQIEWPKGTVLHQDFA 356
           V  FLP+ V ++A  NGL+CC+S       D  I+VCNP+  E+ +++W K        A
Sbjct: 87  VFAFLPQDVVVLALCNGLVCCRSC--YPFEDPAIYVCNPLNSEWWKLDW-KEPGKESFIA 143

Query: 357 LAFDPFCYPVDELSNFKLA----CVCKETLLTILLQVYSSKTKEWSKLELRVRGDNYNCV 524
           LAF+PF      L+NFK+        ++       ++Y+S+T+ W KL   V   + N +
Sbjct: 144 LAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCD-NSL 201

Query: 525 PDGQVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGES 689
              + +F+ G+L+W+T GD IL F+V  E    +  P+            CIGES
Sbjct: 202 SKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLP-AGEFNTRPHACIGES 255


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  113 bits (282), Expect = 4e-23
 Identities = 83/235 (35%), Positives = 122/235 (51%), Gaps = 8/235 (3%)
 Frame = +3

Query: 9   VSKGWRDLISDNSFRRLQCHRVKAVTSGFFFQDTW----DVPYPVKYFSVKNDQAILQDT 176
           VSKGW+DLISD SF + Q  + K   SGFFFQ       D    + YF V+ ++  LQ  
Sbjct: 30  VSKGWKDLISDRSFIQAQSQK-KEPLSGFFFQQRHRYCPDDIKTITYFPVERNR--LQQD 86

Query: 177 VLDFLPEMVELIASSNGLLCCKSYDDSNARDKLIFVCNPIKKEYVQIEWPKGTVLHQDFA 356
           V  FLP+ V ++A  NGL+CC+S       D  I+VCNP+  E+ +++W K        A
Sbjct: 87  VFAFLPQDVVVLALCNGLVCCRSC--YPFEDPAIYVCNPLNSEWWKLDW-KEPGKESFIA 143

Query: 357 LAFDPFCYPVDELSNFKLA----CVCKETLLTILLQVYSSKTKEWSKLELRVRGDNYNCV 524
           LAF+PF      L+NFK+        ++       ++Y+S+T+ W KL   V   + N +
Sbjct: 144 LAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCD-NSL 201

Query: 525 PDGQVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGES 689
              + +F+ G+L+W+T GD IL F+V  E    +  P+            CIGES
Sbjct: 202 SKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLP-AGEFNTRPHACIGES 255


>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  111 bits (278), Expect = 1e-22
 Identities = 76/237 (32%), Positives = 125/237 (52%), Gaps = 10/237 (4%)
 Frame = +3

Query: 9   VSKGWRDLISDNSFRRLQCHRVKAVTSGFFFQDTW-----DVPYPVKYFSVKNDQAILQD 173
           V K WR +ISD SF +    R + + +GFFFQ+ +     D+   + Y     +   +Q 
Sbjct: 25  VCKRWRRIISDRSFIQDLLQRPEPL-AGFFFQERYQWCDEDIS-TISYIPATMEGTQVQQ 82

Query: 174 TVLDFLPEMVELIASSNGLLCCKSYDDSNARDKLIFVCNPIKKEYVQIEWPKGTVLHQDF 353
           T+  FLPE V ++ S NGL+CC+S   S   D  IFVCNP  K+++++           +
Sbjct: 83  TIFSFLPEDVVILGSCNGLVCCRSVFPS--PDPSIFVCNPSNKQWIRL-LETTPDKESSY 139

Query: 354 ALAFDPFCYPVDELSNFKLACVCK-----ETLLTILLQVYSSKTKEWSKLELRVRGDNYN 518
            LAF+PF  P+D  +NFK+  V +     +       ++YSS+   W K +  +   N+N
Sbjct: 140 GLAFNPFQSPIDMPTNFKVVRVSQAQTDMDDDSYFSFEIYSSQAGAWKKSK-EICQCNHN 198

Query: 519 CVPDGQVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGES 689
              + + +F  G+L+W+T GD +L+F++  E    +  P   I+ +  + E+CIGES
Sbjct: 199 LFKN-KGIFVGGILHWLTDGDQVLSFNIENELSWLISAPFPTIHLT-AIPEMCIGES 253


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score =  109 bits (272), Expect = 6e-22
 Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
 Frame = +3

Query: 9   VSKGWRDLISDNSFRRLQCHRVKAVTSGFFFQDTW-DVPYPVKYFSVK--NDQAILQDTV 179
           VSK W  LI D SF + Q  +     SGF FQ+ +   P  +  F+    +  + +Q  V
Sbjct: 26  VSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKYRKCPIDISTFTYMPIDADSKVQKMV 85

Query: 180 LDFLPEMVELIASSNGLLCCKSY---DDSNARDKLIFVCNPIKKEYVQIEWPKGTVLHQD 350
             FLPE V ++ S NGL+CC+S      S      I+VCNP+ K++V  E  +       
Sbjct: 86  FGFLPEDVVILQSCNGLVCCRSCFRTQHSTTHSTTIYVCNPLFKKWVSFEVAQLDSF-SS 144

Query: 351 FALAFDPFCYPVDELSNFKLACVCK----ETLLTILLQVYSSKTKEWSKLELRVRGDNYN 518
            ALAFDP   PV+  +NFK+  + +    +  +    ++YSS+T  W +        +  
Sbjct: 145 IALAFDPILDPVNTATNFKVVRIQQLENEQEEMYYTFEIYSSETGTWKE-------SSEV 197

Query: 519 CVPDGQVV-----FASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIG 683
           C  DG ++     +A G+L+W+T  D ILAFD   E    V  P+  +         CIG
Sbjct: 198 CYSDGNLLKNNGTYAKGVLHWLTDTDQILAFDTEKELSLLVPSPIPALEMFIDAPGTCIG 257

Query: 684 ES 689
           ES
Sbjct: 258 ES 259