BLASTX nr result
ID: Coptis21_contig00003756
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003756 (691 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm... 114 2e-23 ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2... 113 4e-23 gb|ABK92768.1| unknown [Populus trichocarpa] 113 4e-23 ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi... 111 1e-22 ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc... 109 6e-22 >ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis] gi|223535221|gb|EEF36899.1| conserved hypothetical protein [Ricinus communis] Length = 375 Score = 114 bits (285), Expect = 2e-23 Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 5/231 (2%) Frame = +3 Query: 9 VSKGWRDLISDNSFRRLQCHRVKAVTSGFFFQDT-----WDVPYPVKYFSVKNDQAILQD 173 VSKGW+ LI + SF ++Q R + + SGFFFQ +D+ + Y VK + L Sbjct: 31 VSKGWQHLIMNQSFIQIQSRRREPL-SGFFFQQRFQWSEYDIE-TINYIPVKWEGLELHK 88 Query: 174 TVLDFLPEMVELIASSNGLLCCKSYDDSNARDKLIFVCNPIKKEYVQIEWPKGTVLHQDF 353 V DFLP+ V L+ + NGL+CC+S IFVCNP+ KE+V+++W + H Sbjct: 89 KVFDFLPQDVVLLTTCNGLVCCRSCFPFEL--PAIFVCNPLNKEWVKLDWTEPDKEH-SI 145 Query: 354 ALAFDPFCYPVDELSNFKLACVCKETLLTILLQVYSSKTKEWSKLELRVRGDNYNCVPDG 533 ALAFDP +NFKL + L +YSS+T W+ L + N N + Sbjct: 146 ALAFDPLLDISGNSANFKL-----DEQLYFSFDIYSSRTGSWN-LSKDICWCNSN-LHKN 198 Query: 534 QVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGE 686 + V+ G+L+W+T D IL FDV E + PV S + CIGE Sbjct: 199 KGVYIRGVLHWLTDEDQILTFDVDNELAFLISAPVPAAEFSTA-PKACIGE 248 >ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1| predicted protein [Populus trichocarpa] Length = 424 Score = 113 bits (282), Expect = 4e-23 Identities = 83/235 (35%), Positives = 122/235 (51%), Gaps = 8/235 (3%) Frame = +3 Query: 9 VSKGWRDLISDNSFRRLQCHRVKAVTSGFFFQDTW----DVPYPVKYFSVKNDQAILQDT 176 VSKGW+DLISD SF + Q + K SGFFFQ D + YF V+ ++ LQ Sbjct: 30 VSKGWKDLISDRSFIQAQSQK-KEPLSGFFFQQRHRYCPDDIKTITYFPVERNR--LQQD 86 Query: 177 VLDFLPEMVELIASSNGLLCCKSYDDSNARDKLIFVCNPIKKEYVQIEWPKGTVLHQDFA 356 V FLP+ V ++A NGL+CC+S D I+VCNP+ E+ +++W K A Sbjct: 87 VFAFLPQDVVVLALCNGLVCCRSC--YPFEDPAIYVCNPLNSEWWKLDW-KEPGKESFIA 143 Query: 357 LAFDPFCYPVDELSNFKLA----CVCKETLLTILLQVYSSKTKEWSKLELRVRGDNYNCV 524 LAF+PF L+NFK+ ++ ++Y+S+T+ W KL V + N + Sbjct: 144 LAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCD-NSL 201 Query: 525 PDGQVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGES 689 + +F+ G+L+W+T GD IL F+V E + P+ CIGES Sbjct: 202 SKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLP-AGEFNTRPHACIGES 255 >gb|ABK92768.1| unknown [Populus trichocarpa] Length = 384 Score = 113 bits (282), Expect = 4e-23 Identities = 83/235 (35%), Positives = 122/235 (51%), Gaps = 8/235 (3%) Frame = +3 Query: 9 VSKGWRDLISDNSFRRLQCHRVKAVTSGFFFQDTW----DVPYPVKYFSVKNDQAILQDT 176 VSKGW+DLISD SF + Q + K SGFFFQ D + YF V+ ++ LQ Sbjct: 30 VSKGWKDLISDRSFIQAQSQK-KEPLSGFFFQQRHRYCPDDIKTITYFPVERNR--LQQD 86 Query: 177 VLDFLPEMVELIASSNGLLCCKSYDDSNARDKLIFVCNPIKKEYVQIEWPKGTVLHQDFA 356 V FLP+ V ++A NGL+CC+S D I+VCNP+ E+ +++W K A Sbjct: 87 VFAFLPQDVVVLALCNGLVCCRSC--YPFEDPAIYVCNPLNSEWWKLDW-KEPGKESFIA 143 Query: 357 LAFDPFCYPVDELSNFKLA----CVCKETLLTILLQVYSSKTKEWSKLELRVRGDNYNCV 524 LAF+PF L+NFK+ ++ ++Y+S+T+ W KL V + N + Sbjct: 144 LAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCD-NSL 201 Query: 525 PDGQVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGES 689 + +F+ G+L+W+T GD IL F+V E + P+ CIGES Sbjct: 202 SKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLP-AGEFNTRPHACIGES 255 >ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera] gi|296088512|emb|CBI37503.3| unnamed protein product [Vitis vinifera] Length = 378 Score = 111 bits (278), Expect = 1e-22 Identities = 76/237 (32%), Positives = 125/237 (52%), Gaps = 10/237 (4%) Frame = +3 Query: 9 VSKGWRDLISDNSFRRLQCHRVKAVTSGFFFQDTW-----DVPYPVKYFSVKNDQAILQD 173 V K WR +ISD SF + R + + +GFFFQ+ + D+ + Y + +Q Sbjct: 25 VCKRWRRIISDRSFIQDLLQRPEPL-AGFFFQERYQWCDEDIS-TISYIPATMEGTQVQQ 82 Query: 174 TVLDFLPEMVELIASSNGLLCCKSYDDSNARDKLIFVCNPIKKEYVQIEWPKGTVLHQDF 353 T+ FLPE V ++ S NGL+CC+S S D IFVCNP K+++++ + Sbjct: 83 TIFSFLPEDVVILGSCNGLVCCRSVFPS--PDPSIFVCNPSNKQWIRL-LETTPDKESSY 139 Query: 354 ALAFDPFCYPVDELSNFKLACVCK-----ETLLTILLQVYSSKTKEWSKLELRVRGDNYN 518 LAF+PF P+D +NFK+ V + + ++YSS+ W K + + N+N Sbjct: 140 GLAFNPFQSPIDMPTNFKVVRVSQAQTDMDDDSYFSFEIYSSQAGAWKKSK-EICQCNHN 198 Query: 519 CVPDGQVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGES 689 + + +F G+L+W+T GD +L+F++ E + P I+ + + E+CIGES Sbjct: 199 LFKN-KGIFVGGILHWLTDGDQVLSFNIENELSWLISAPFPTIHLT-AIPEMCIGES 253 >ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus] Length = 399 Score = 109 bits (272), Expect = 6e-22 Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 15/242 (6%) Frame = +3 Query: 9 VSKGWRDLISDNSFRRLQCHRVKAVTSGFFFQDTW-DVPYPVKYFSVK--NDQAILQDTV 179 VSK W LI D SF + Q + SGF FQ+ + P + F+ + + +Q V Sbjct: 26 VSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKYRKCPIDISTFTYMPIDADSKVQKMV 85 Query: 180 LDFLPEMVELIASSNGLLCCKSY---DDSNARDKLIFVCNPIKKEYVQIEWPKGTVLHQD 350 FLPE V ++ S NGL+CC+S S I+VCNP+ K++V E + Sbjct: 86 FGFLPEDVVILQSCNGLVCCRSCFRTQHSTTHSTTIYVCNPLFKKWVSFEVAQLDSF-SS 144 Query: 351 FALAFDPFCYPVDELSNFKLACVCK----ETLLTILLQVYSSKTKEWSKLELRVRGDNYN 518 ALAFDP PV+ +NFK+ + + + + ++YSS+T W + + Sbjct: 145 IALAFDPILDPVNTATNFKVVRIQQLENEQEEMYYTFEIYSSETGTWKE-------SSEV 197 Query: 519 CVPDGQVV-----FASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIG 683 C DG ++ +A G+L+W+T D ILAFD E V P+ + CIG Sbjct: 198 CYSDGNLLKNNGTYAKGVLHWLTDTDQILAFDTEKELSLLVPSPIPALEMFIDAPGTCIG 257 Query: 684 ES 689 ES Sbjct: 258 ES 259