BLASTX nr result

ID: Coptis21_contig00003754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003754
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34625.3| unnamed protein product [Vitis vinifera]              234   2e-59
ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03...   234   4e-59
emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]   234   4e-59
emb|CBI38731.3| unnamed protein product [Vitis vinifera]              229   9e-58
ref|XP_002268399.1| PREDICTED: B3 domain-containing transcriptio...   229   9e-58

>emb|CBI34625.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  234 bits (598), Expect = 2e-59
 Identities = 134/257 (52%), Positives = 152/257 (59%), Gaps = 1/257 (0%)
 Frame = -1

Query: 778 LMEFFQGRERCCEDEEVDMIGDMDKQVPYSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXX 599
           +M+    R+  CE E+V       KQ+P+S SS                           
Sbjct: 45  IMDLLPDRDVVCEQEQVIR----GKQLPFSYSSSPSPSSSSS------------------ 82

Query: 598 XSQYKGSTTQQLNG-RWGAQFYDKNREIWLSEQEAARCNYDGSSGKKIELKXXXXXXXXX 422
             QY+        G RW AQ     +  WL  QE     ++G +  K+EL          
Sbjct: 83  --QYRNLVPLPNGGDRWDAQI----QRGWLGHQEDGMRCFEGGAASKLELMDTSPTNDED 136

Query: 421 XXXXXXXXXXXXXDVVCIEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKG 242
                            +EREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS+NEKG
Sbjct: 137 DVVDDDVRRRDSQ---ALEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKG 193

Query: 241 LLLNFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLYAGDIVSFQRGAGETVKDR 62
           LLLNFEDR+GKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKL AGDIVSFQRG GE+ KDR
Sbjct: 194 LLLNFEDRSGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDR 253

Query: 61  LYIDWRRRSDVQDPGTL 11
           LYIDWRRR D  +P +L
Sbjct: 254 LYIDWRRRPDAPEPSSL 270


>ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
           vinifera]
          Length = 411

 Score =  234 bits (596), Expect = 4e-59
 Identities = 134/256 (52%), Positives = 151/256 (58%), Gaps = 1/256 (0%)
 Frame = -1

Query: 775 MEFFQGRERCCEDEEVDMIGDMDKQVPYSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 596
           M+    R+  CE E+V       KQ+P+S SS                            
Sbjct: 1   MDLLPDRDVVCEQEQVIR----GKQLPFSYSSSPSPSSSSS------------------- 37

Query: 595 SQYKGSTTQQLNG-RWGAQFYDKNREIWLSEQEAARCNYDGSSGKKIELKXXXXXXXXXX 419
            QY+        G RW AQ     +  WL  QE     ++G +  K+EL           
Sbjct: 38  -QYRNLVPLPNGGDRWDAQI----QRGWLGHQEDGMRCFEGGAASKLELMDTSPTNDEDD 92

Query: 418 XXXXXXXXXXXXDVVCIEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGL 239
                           +EREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS+NEKGL
Sbjct: 93  VVDDDVRRRDSQ---ALEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGL 149

Query: 238 LLNFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLYAGDIVSFQRGAGETVKDRL 59
           LLNFEDR+GKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKL AGDIVSFQRG GE+ KDRL
Sbjct: 150 LLNFEDRSGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRL 209

Query: 58  YIDWRRRSDVQDPGTL 11
           YIDWRRR D  +P +L
Sbjct: 210 YIDWRRRPDAPEPSSL 225


>emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
          Length = 505

 Score =  234 bits (596), Expect = 4e-59
 Identities = 134/256 (52%), Positives = 151/256 (58%), Gaps = 1/256 (0%)
 Frame = -1

Query: 775 MEFFQGRERCCEDEEVDMIGDMDKQVPYSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 596
           M+    R+  CE E+V       KQ+P+S SS                            
Sbjct: 1   MDLLPDRDVVCEQEQVIR----GKQLPFSYSSSPSPSSSSS------------------- 37

Query: 595 SQYKGSTTQQLNG-RWGAQFYDKNREIWLSEQEAARCNYDGSSGKKIELKXXXXXXXXXX 419
            QY+        G RW AQ     +  WL  QE     ++G +  K+EL           
Sbjct: 38  -QYRNLVPLPNGGDRWDAQI----QRGWLGHQEDGMRCFEGGAASKLELMDTSPTNDEDD 92

Query: 418 XXXXXXXXXXXXDVVCIEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGL 239
                           +EREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS+NEKGL
Sbjct: 93  VVDDDVRRRDSQ---ALEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGL 149

Query: 238 LLNFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLYAGDIVSFQRGAGETVKDRL 59
           LLNFEDR+GKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKL AGDIVSFQRG GE+ KDRL
Sbjct: 150 LLNFEDRSGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRL 209

Query: 58  YIDWRRRSDVQDPGTL 11
           YIDWRRR D  +P +L
Sbjct: 210 YIDWRRRPDAPEPSSL 225


>emb|CBI38731.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  229 bits (584), Expect = 9e-58
 Identities = 108/125 (86%), Positives = 115/125 (92%)
 Frame = -1

Query: 376 VCIEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRTGKPWRF 197
           VC+EREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS+++KGLLLNFEDR GKPWRF
Sbjct: 87  VCVEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSASDKGLLLNFEDRDGKPWRF 146

Query: 196 RYSYWNSSQSYVMTKGWSRFVKEKKLYAGDIVSFQRGAGETVKDRLYIDWRRRSDVQDPG 17
           RYSYWNSSQSYVMTKGWSRFVKEKKL AGDIVSF+RG GE+ KDRLYIDWRRR D  DP 
Sbjct: 147 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPT 206

Query: 16  TLPPL 2
           +L  L
Sbjct: 207 SLSHL 211


>ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Vitis vinifera]
          Length = 461

 Score =  229 bits (584), Expect = 9e-58
 Identities = 108/125 (86%), Positives = 115/125 (92%)
 Frame = -1

Query: 376 VCIEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRTGKPWRF 197
           VC+EREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS+++KGLLLNFEDR GKPWRF
Sbjct: 131 VCVEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSASDKGLLLNFEDRDGKPWRF 190

Query: 196 RYSYWNSSQSYVMTKGWSRFVKEKKLYAGDIVSFQRGAGETVKDRLYIDWRRRSDVQDPG 17
           RYSYWNSSQSYVMTKGWSRFVKEKKL AGDIVSF+RG GE+ KDRLYIDWRRR D  DP 
Sbjct: 191 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPT 250

Query: 16  TLPPL 2
           +L  L
Sbjct: 251 SLSHL 255


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