BLASTX nr result

ID: Coptis21_contig00003753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003753
         (1280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279455.1| PREDICTED: uncharacterized protein LOC100260...   382   e-103
ref|XP_004158526.1| PREDICTED: uncharacterized LOC101222789 [Cuc...   372   e-101
ref|XP_004138667.1| PREDICTED: uncharacterized protein LOC101222...   372   e-101
ref|XP_002528048.1| electron transporter, putative [Ricinus comm...   372   e-100
ref|XP_002325512.1| predicted protein [Populus trichocarpa] gi|2...   359   1e-96

>ref|XP_002279455.1| PREDICTED: uncharacterized protein LOC100260279 [Vitis vinifera]
            gi|147778834|emb|CAN64828.1| hypothetical protein
            VITISV_030309 [Vitis vinifera]
            gi|297741045|emb|CBI31357.3| unnamed protein product
            [Vitis vinifera]
          Length = 348

 Score =  382 bits (981), Expect = e-103
 Identities = 202/323 (62%), Positives = 233/323 (72%), Gaps = 11/323 (3%)
 Frame = +2

Query: 296  RLGCVRVDDRSFLGGGVSKLKLCLSYRSVVVVVSAGKKNTXXXXXXXXXXXDHSVPEEDG 475
            ++G  R +D     G + ++++     S +VV + GKKN            D S+PE D 
Sbjct: 33   KVGSFRPED-----GRLFEIRVASRKASSLVVRAMGKKN--HDNSSSSGNGDRSIPEGDS 85

Query: 476  SKGSKPASDENICDIGD--------DWRKFRANLVARKQVHLVDVDNPFHDKVSHEISKP 631
             KG+ P+      D           DWR+FRA L AR+Q    D +         E  KP
Sbjct: 86   LKGNNPSEGNKSNDTASQKSRQIIVDWREFRAALFAREQAEKADPEAHSQGGTPQE-PKP 144

Query: 632  LGQKWAHSISVPETGCVLVATEKLDGVPNFERTVVLLLRSGTKHPYEGPFGVVINRPLHK 811
            LG KWAH I VPETGCVLVATEKLDGV +FERTVVLLLRSGT+HP EGPFGVVINRPLHK
Sbjct: 145  LGLKWAHPIPVPETGCVLVATEKLDGVRSFERTVVLLLRSGTRHPQEGPFGVVINRPLHK 204

Query: 812  KIKHMKPTNLDLATTFADCSLYSGGPLEASMFLLNAGANPVLCDFEQVIPGLCFGARNNL 991
            KIKHMKPTNLDLATTFADCSL+ GGPLEASMFLL  G NP L   E+VIPGLC+GARN+L
Sbjct: 205  KIKHMKPTNLDLATTFADCSLHFGGPLEASMFLLKTGENPKLPGLEEVIPGLCYGARNSL 264

Query: 992  DEAAAMVKKGVLRPRDFRFFVGYAGWQLDQLKEEIESDYWYVAACSANLISG---GSSSG 1162
            DEAA +VK+GVL+P+DFRFFVGYAGWQLDQL+EEIESDYWYVAACS N+ISG    SSSG
Sbjct: 265  DEAAKLVKQGVLKPQDFRFFVGYAGWQLDQLREEIESDYWYVAACSPNVISGVSAESSSG 324

Query: 1163 LWEEILQSMGGHYSEISKKPKQD 1231
            LWEE+LQ MGGHYSE+S+KPKQD
Sbjct: 325  LWEEVLQLMGGHYSELSRKPKQD 347


>ref|XP_004158526.1| PREDICTED: uncharacterized LOC101222789 [Cucumis sativus]
          Length = 362

 Score =  372 bits (956), Expect = e-101
 Identities = 191/274 (69%), Positives = 214/274 (78%), Gaps = 13/274 (4%)
 Frame = +2

Query: 449  DHSVPEEDGSKGSKPASDENICD---------IGDDWRKFRANLVARKQVHLVDVDNPFH 601
            DHSVP +D    SK  SD N  +         +  DWR+FRANL AR+Q   V+ D    
Sbjct: 91   DHSVPGDDAK--SKNISDGNESNEISSQKPHLVNLDWREFRANLFAREQAEKVEADVETQ 148

Query: 602  DKVSHEISKPLGQKWAHSISVPETGCVLVATEKLDGVPNFERTVVLLLRSGTKHPYEGPF 781
               +HE SK L  KWAH I +PETGCVLVATEKLDGV  FERTVVLLLRSG++HP EGPF
Sbjct: 149  TANAHE-SKGLALKWAHPIPMPETGCVLVATEKLDGVRTFERTVVLLLRSGSRHPQEGPF 207

Query: 782  GVVINRPLHKKIKHMKPTNLDLATTFADCSLYSGGPLEASMFLLNAGANPVLCDFEQVIP 961
            GVVINRPLHKKIKHMKPTN+DLATTF++CSL+ GGPLEASMFLL AG    L  FE+VIP
Sbjct: 208  GVVINRPLHKKIKHMKPTNIDLATTFSECSLHFGGPLEASMFLLKAGEKSKLHGFEEVIP 267

Query: 962  GLCFGARNNLDEAAAMVKKGVLRPRDFRFFVGYAGWQLDQLKEEIESDYWYVAACSANLI 1141
            GLCFGARN LDEAA +VKKG+L+P+DFRFFVGYAGWQLDQL+EEIESDYWYVAACS+NLI
Sbjct: 268  GLCFGARNTLDEAAVLVKKGILKPQDFRFFVGYAGWQLDQLREEIESDYWYVAACSSNLI 327

Query: 1142 SG----GSSSGLWEEILQSMGGHYSEISKKPKQD 1231
             G     SS GLWEEILQ MGGHYSE+S+KPKQD
Sbjct: 328  GGISSDSSSEGLWEEILQLMGGHYSELSRKPKQD 361


>ref|XP_004138667.1| PREDICTED: uncharacterized protein LOC101222789 [Cucumis sativus]
          Length = 362

 Score =  372 bits (956), Expect = e-101
 Identities = 191/274 (69%), Positives = 214/274 (78%), Gaps = 13/274 (4%)
 Frame = +2

Query: 449  DHSVPEEDGSKGSKPASDENICD---------IGDDWRKFRANLVARKQVHLVDVDNPFH 601
            DHSVP +D    SK  SD N  +         +  DWR+FRANL AR+Q   V+ D    
Sbjct: 91   DHSVPGDDAK--SKNISDGNESNETSSQKPHLVNLDWREFRANLFAREQAEKVEADVETQ 148

Query: 602  DKVSHEISKPLGQKWAHSISVPETGCVLVATEKLDGVPNFERTVVLLLRSGTKHPYEGPF 781
               +HE SK L  KWAH I +PETGCVLVATEKLDGV  FERTVVLLLRSG++HP EGPF
Sbjct: 149  TANAHE-SKGLALKWAHPIPMPETGCVLVATEKLDGVRTFERTVVLLLRSGSRHPQEGPF 207

Query: 782  GVVINRPLHKKIKHMKPTNLDLATTFADCSLYSGGPLEASMFLLNAGANPVLCDFEQVIP 961
            GVVINRPLHKKIKHMKPTN+DLATTF++CSL+ GGPLEASMFLL AG    L  FE+VIP
Sbjct: 208  GVVINRPLHKKIKHMKPTNIDLATTFSECSLHFGGPLEASMFLLKAGEKSKLHGFEEVIP 267

Query: 962  GLCFGARNNLDEAAAMVKKGVLRPRDFRFFVGYAGWQLDQLKEEIESDYWYVAACSANLI 1141
            GLCFGARN LDEAA +VKKG+L+P+DFRFFVGYAGWQLDQL+EEIESDYWYVAACS+NLI
Sbjct: 268  GLCFGARNTLDEAAVLVKKGILKPQDFRFFVGYAGWQLDQLREEIESDYWYVAACSSNLI 327

Query: 1142 SG----GSSSGLWEEILQSMGGHYSEISKKPKQD 1231
             G     SS GLWEEILQ MGGHYSE+S+KPKQD
Sbjct: 328  GGISSDSSSEGLWEEILQLMGGHYSELSRKPKQD 361


>ref|XP_002528048.1| electron transporter, putative [Ricinus communis]
            gi|223532578|gb|EEF34366.1| electron transporter,
            putative [Ricinus communis]
          Length = 350

 Score =  372 bits (955), Expect = e-100
 Identities = 193/299 (64%), Positives = 221/299 (73%), Gaps = 12/299 (4%)
 Frame = +2

Query: 371  YRSVVVVVSAGKKNTXXXXXXXXXXXDHSVPEEDGSKGSKPASDENICD--------IGD 526
            Y S V+   A K N            D   PE DG KGS  +  +   D        +  
Sbjct: 58   YHSFVIRAMAKKNNNNNGNG------DRPNPEGDGLKGSNSSDSKKSNDSASQKSHRVNL 111

Query: 527  DWRKFRANLVARKQVHLVDVDNPFHDKVSHEISKPLGQKWAHSISVPETGCVLVATEKLD 706
            DWR+FRA +V ++Q  + ++D   +  ++   SKPLG KWAH ISVPETGCVLVATEKLD
Sbjct: 112  DWREFRAKMVIQEQAEIAEIDAA-NQVITPRDSKPLGLKWAHPISVPETGCVLVATEKLD 170

Query: 707  GVPNFERTVVLLLRSGTKHPYEGPFGVVINRPLHKKIKHMKPTNLDLATTFADCSLYSGG 886
            GV  FERTVVLLLRSGT+HP EGPFGVVINRPL+KKIKHMKPTN +LATTFADCSL+ GG
Sbjct: 171  GVRTFERTVVLLLRSGTRHPQEGPFGVVINRPLNKKIKHMKPTNKELATTFADCSLHFGG 230

Query: 887  PLEASMFLLNAGANPVLCDFEQVIPGLCFGARNNLDEAAAMVKKGVLRPRDFRFFVGYAG 1066
            PLEASMFLL  G    L  FE+VIPGLCFGARN+LDEAAA+VKKGVL+P+DFRFFVGYAG
Sbjct: 231  PLEASMFLLQTGEKEKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAG 290

Query: 1067 WQLDQLKEEIESDYWYVAACSANLISG----GSSSGLWEEILQSMGGHYSEISKKPKQD 1231
            WQLDQL+EEIESDYWYVA+CS+NLI G     SS  LWEEILQ MGGHYSE+S+KPKQD
Sbjct: 291  WQLDQLREEIESDYWYVASCSSNLICGNSSDSSSESLWEEILQLMGGHYSELSRKPKQD 349


>ref|XP_002325512.1| predicted protein [Populus trichocarpa] gi|222862387|gb|EEE99893.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  359 bits (921), Expect = 1e-96
 Identities = 183/266 (68%), Positives = 207/266 (77%), Gaps = 12/266 (4%)
 Frame = +2

Query: 470  DGSKGSKPASDENICDIGD--------DWRKFRANLVARKQVHLVDVDNPFHDKVSHEIS 625
            DGSKGS         D           DWR+FRANL A+++    + D         E S
Sbjct: 79   DGSKGSNSPDGNKANDFASQKSHRVNFDWREFRANLFAQEKAGKAESDAHNQTGTPQE-S 137

Query: 626  KPLGQKWAHSISVPETGCVLVATEKLDGVPNFERTVVLLLRSGTKHPYEGPFGVVINRPL 805
            KPLG KWAH I VPETGCVLVATEKLDGV  FERTVVLLLRSGT+HP EGPFGVVINRPL
Sbjct: 138  KPLGLKWAHPIPVPETGCVLVATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGVVINRPL 197

Query: 806  HKKIKHMKPTNLDLATTFADCSLYSGGPLEASMFLLNAGANPVLCDFEQVIPGLCFGARN 985
            +KK++HMKPTN++LATTFAD SL+ GGPLEASMFLL  G    L +FE+VIPGLCFGARN
Sbjct: 198  NKKVRHMKPTNMELATTFADFSLHFGGPLEASMFLLKTGEKTKLEEFEEVIPGLCFGARN 257

Query: 986  NLDEAAAMVKKGVLRPRDFRFFVGYAGWQLDQLKEEIESDYWYVAACSANLISGG----S 1153
            +LDEAAA+VKKGVL+P+DFRFFVGYAGWQLDQL+EEIES+YWYVAACS+NLI GG    S
Sbjct: 258  SLDEAAALVKKGVLKPQDFRFFVGYAGWQLDQLREEIESNYWYVAACSSNLICGGSSGSS 317

Query: 1154 SSGLWEEILQSMGGHYSEISKKPKQD 1231
            S  LWEEILQ MGGHYSE+S+KPK+D
Sbjct: 318  SESLWEEILQLMGGHYSELSRKPKRD 343


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