BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003745
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vin...    79   3e-13
gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Sola...    77   1e-12
ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus...    76   3e-12
ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana ta...    74   1e-11
ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochond...    73   2e-11

>ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vinifera]
           gi|209954150|emb|CAQ77586.1| succinate dehydrogenase
           subunit 3 [Vitis vinifera] gi|239764777|gb|ACS15245.1|
           succinate dehydrogenase subunit 3 [Vitis vinifera]
          Length = 168

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/65 (63%), Positives = 45/65 (69%)
 Frame = -1

Query: 221 LFRERKNILRPLSPHLPIYKPQLNSTSSIFNRISXXXXXXXXLFSCVLYLKVGLICFTY* 42
           L   RKNILRPLSPHLPIYKPQL ST  I++RIS        LF  +L LK+GLICFTY 
Sbjct: 57  LINNRKNILRPLSPHLPIYKPQLTSTFPIYHRISGAFLATLVLFFYLLCLKIGLICFTYE 116

Query: 41  NFCSF 27
           NF  F
Sbjct: 117 NFYQF 121


>gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Solanum lycopersicum]
           gi|316996003|dbj|BAD83440.2| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/59 (66%), Positives = 42/59 (71%)
 Frame = -1

Query: 203 NILRPLSPHLPIYKPQLNSTSSIFNRISXXXXXXXXLFSCVLYLKVGLICFTY*NFCSF 27
           NILRPLSPHLPIYKPQL ST SIF+RIS         F  +L LK+GLICFTY NF  F
Sbjct: 2   NILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQF 60


>ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus lanatus]
           gi|295311667|ref|YP_003587234.1| succinate dehydrogenase
           subunit 3 [Citrullus lanatus]
           gi|259156794|gb|ACV96656.1| succinate dehydrogenase
           subunit 3 [Citrullus lanatus]
           gi|259156795|gb|ACV96657.1| succinate dehydrogenase
           subunit 3 [Citrullus lanatus]
          Length = 95

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/59 (67%), Positives = 43/59 (72%)
 Frame = -1

Query: 203 NILRPLSPHLPIYKPQLNSTSSIFNRISXXXXXXXXLFSCVLYLKVGLICFTY*NFCSF 27
           NILRPLSPHLPIYKPQL ST SIF+RIS        LF  +L LK+GLICFTY NF  F
Sbjct: 2   NILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATLVLFFYLLCLKMGLICFTYSNFYRF 60


>ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
           gi|57013992|ref|YP_173464.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|57014032|ref|YP_173503.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|56806628|dbj|BAD83529.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
           gi|56806668|dbj|BAD83569.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/59 (64%), Positives = 41/59 (69%)
 Frame = -1

Query: 203 NILRPLSPHLPIYKPQLNSTSSIFNRISXXXXXXXXLFSCVLYLKVGLICFTY*NFCSF 27
           NILRPLSPHLPIYKPQL ST SI +RIS         F  +L LK+GLICFTY NF  F
Sbjct: 2   NILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQF 60


>ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochondrion) [Mimulus
           guttatus] gi|340007673|gb|AEK26537.1| succinate
           dehydrogenase subunit 3 (mitochondrion) [Mimulus
           guttatus]
          Length = 111

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/65 (56%), Positives = 43/65 (66%)
 Frame = -1

Query: 227 EKLFRERKNILRPLSPHLPIYKPQLNSTSSIFNRISXXXXXXXXLFSCVLYLKVGLICFT 48
           +K  + + NILRPLSPHLPIYKPQL ST  I +RIS         F  +L LK+GLICFT
Sbjct: 2   KKKIQPKMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATILFFFYLLCLKIGLICFT 61

Query: 47  Y*NFC 33
           Y N C
Sbjct: 62  YENVC 66