BLASTX nr result

ID: Coptis21_contig00003737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003737
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892569.1| hypothetical protein ARALYDRAFT_471156 [Arab...    55   8e-06

>ref|XP_002892569.1| hypothetical protein ARALYDRAFT_471156 [Arabidopsis lyrata subsp.
           lyrata] gi|297338411|gb|EFH68828.1| hypothetical protein
           ARALYDRAFT_471156 [Arabidopsis lyrata subsp. lyrata]
          Length = 253

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 47/120 (39%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
 Frame = +1

Query: 4   NVTAEKKALRCEVRGLEIALRKIQDAVMRMDAEDRKIITSALEDQEKRAQMSEKENGRDE 183
           N+ +EK+AL  EV+GLE+ L++IQ++V  M  EDRK+ TS L  +    Q S ++N R  
Sbjct: 103 NLISEKEALYSEVKGLEMILQRIQESVSLMTEEDRKVFTSILTFE----QGSNEKNKR-- 156

Query: 184 SIHNDTDHGAAENKGLSP---RQDNSAK-DPSNEQHYTDSCISEGTSTLLVQ---HQLDS 342
           S HNDT     E    +P    Q+NS K  PS     +  C  + T   ++Q   HQLDS
Sbjct: 157 SRHNDTVDKMEELLCEAPVMHSQENSVKVIPS----ASPRCQHQNTDCRMIQDDDHQLDS 212


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