BLASTX nr result

ID: Coptis21_contig00003720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003720
         (1743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21631.3| unnamed protein product [Vitis vinifera]              553   e-155
ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255...   553   e-155
ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780...   515   e-143
ref|XP_002515845.1| gamma-tubulin complex component, putative [R...   505   e-140
ref|XP_002877284.1| tubulin family protein [Arabidopsis lyrata s...   459   e-126

>emb|CBI21631.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score =  553 bits (1424), Expect = e-155
 Identities = 268/413 (64%), Positives = 318/413 (76%), Gaps = 3/413 (0%)
 Frame = -1

Query: 1677 VDQINSY---SVTLSGNRQEETASTNSSGGAEWESSLSYLGKRFKHSIEGHKKSLGSTFN 1507
            +D   SY   S+ ++   QE+  S N SGG+ WE+ L+  G    +S+  H  SLG  F 
Sbjct: 622  IDNTKSYICSSLDVNQCNQEDVVSANVSGGSSWETLLASSGNAVNNSVGQHTLSLGGVFE 681

Query: 1506 IPLDFIIDKCMLQEILSQYEYISDFSIMLLEEGFDLQGHLLALRRYYFMEFADWADLFIM 1327
            +PL+FII+KC+L EIL QY+Y+S  +I LLEEGFDLQ H LALRRY+FME ADWADLFIM
Sbjct: 682  MPLEFIINKCLLPEILLQYKYVSKLTIKLLEEGFDLQEHFLALRRYHFMELADWADLFIM 741

Query: 1326 SLWRHKWSVAEASQRISEIQGFLDLAVQRSSCEADPYKERLYLYKKGHVVVPLSTPGTGV 1147
            SLW H+W+V EA QR+SEIQG L+L++QRSSCE D  K++L++Y KGH + PLST  TGV
Sbjct: 742  SLWNHRWNVTEADQRLSEIQGLLELSLQRSSCERDLKKDKLFVYMKGHAMAPLSTFSTGV 801

Query: 1146 HAFDFIALGYRVDWPVNIVLTRSALKTYLDIFSFLIQVKLAVFSLTDVWSSMKDLVHLIS 967
            H+F F+ LGYRVDWP++I+LT  ALK Y DIFSFLIQVKLA FSLTDVW S+KDL+HL+S
Sbjct: 802  HSFSFLGLGYRVDWPISIILTPGALKIYADIFSFLIQVKLAAFSLTDVWCSLKDLMHLVS 861

Query: 966  QSHHCQLDEQEKTIFNILMKMRHQLNHFVSTLQQYVQSQLSDVSWCRFLHSLKHQVKDMF 787
            Q+ H  L  Q+    +IL+K RHQ+NHFVSTLQQYVQS LS VSWCRFL SL H+VKDM 
Sbjct: 862  QNRHSSLHGQKIQHLHILIKTRHQVNHFVSTLQQYVQSHLSHVSWCRFLQSLNHKVKDMM 921

Query: 786  DLESVHMAYLTDSLHICFLSDQTRPVAGIVESILQCALDFRSCFTGVIWEVGSDCRDSSR 607
            DLESVHM YL DSLH+CFLSD TR VA ++ESILQCA+DFR C TG  WEV  D  D   
Sbjct: 922  DLESVHMTYLMDSLHVCFLSDATRSVATVIESILQCAVDFRFCLTGCTWEVKQDQGDVFS 981

Query: 606  VLGGLNISQVLAIKAVFVKNLKELYLCYLKSPKHGEFSLSRFWGYLNYNDYYS 448
             L  +NI+QVLAIK  F KNLKELYLCYLKSPKHGEF LSRFWGYLNYN+YYS
Sbjct: 982  KLSQINITQVLAIKRAFDKNLKELYLCYLKSPKHGEFGLSRFWGYLNYNEYYS 1034


>ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255993 [Vitis vinifera]
          Length = 1239

 Score =  553 bits (1424), Expect = e-155
 Identities = 268/413 (64%), Positives = 318/413 (76%), Gaps = 3/413 (0%)
 Frame = -1

Query: 1677 VDQINSY---SVTLSGNRQEETASTNSSGGAEWESSLSYLGKRFKHSIEGHKKSLGSTFN 1507
            +D   SY   S+ ++   QE+  S N SGG+ WE+ L+  G    +S+  H  SLG  F 
Sbjct: 818  IDNTKSYICSSLDVNQCNQEDVVSANVSGGSSWETLLASSGNAVNNSVGQHTLSLGGVFE 877

Query: 1506 IPLDFIIDKCMLQEILSQYEYISDFSIMLLEEGFDLQGHLLALRRYYFMEFADWADLFIM 1327
            +PL+FII+KC+L EIL QY+Y+S  +I LLEEGFDLQ H LALRRY+FME ADWADLFIM
Sbjct: 878  MPLEFIINKCLLPEILLQYKYVSKLTIKLLEEGFDLQEHFLALRRYHFMELADWADLFIM 937

Query: 1326 SLWRHKWSVAEASQRISEIQGFLDLAVQRSSCEADPYKERLYLYKKGHVVVPLSTPGTGV 1147
            SLW H+W+V EA QR+SEIQG L+L++QRSSCE D  K++L++Y KGH + PLST  TGV
Sbjct: 938  SLWNHRWNVTEADQRLSEIQGLLELSLQRSSCERDLKKDKLFVYMKGHAMAPLSTFSTGV 997

Query: 1146 HAFDFIALGYRVDWPVNIVLTRSALKTYLDIFSFLIQVKLAVFSLTDVWSSMKDLVHLIS 967
            H+F F+ LGYRVDWP++I+LT  ALK Y DIFSFLIQVKLA FSLTDVW S+KDL+HL+S
Sbjct: 998  HSFSFLGLGYRVDWPISIILTPGALKIYADIFSFLIQVKLAAFSLTDVWCSLKDLMHLVS 1057

Query: 966  QSHHCQLDEQEKTIFNILMKMRHQLNHFVSTLQQYVQSQLSDVSWCRFLHSLKHQVKDMF 787
            Q+ H  L  Q+    +IL+K RHQ+NHFVSTLQQYVQS LS VSWCRFL SL H+VKDM 
Sbjct: 1058 QNRHSSLHGQKIQHLHILIKTRHQVNHFVSTLQQYVQSHLSHVSWCRFLQSLNHKVKDMM 1117

Query: 786  DLESVHMAYLTDSLHICFLSDQTRPVAGIVESILQCALDFRSCFTGVIWEVGSDCRDSSR 607
            DLESVHM YL DSLH+CFLSD TR VA ++ESILQCA+DFR C TG  WEV  D  D   
Sbjct: 1118 DLESVHMTYLMDSLHVCFLSDATRSVATVIESILQCAVDFRFCLTGCTWEVKQDQGDVFS 1177

Query: 606  VLGGLNISQVLAIKAVFVKNLKELYLCYLKSPKHGEFSLSRFWGYLNYNDYYS 448
             L  +NI+QVLAIK  F KNLKELYLCYLKSPKHGEF LSRFWGYLNYN+YYS
Sbjct: 1178 KLSQINITQVLAIKRAFDKNLKELYLCYLKSPKHGEFGLSRFWGYLNYNEYYS 1230


>ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780017 [Glycine max]
          Length = 1179

 Score =  515 bits (1327), Expect = e-143
 Identities = 251/398 (63%), Positives = 309/398 (77%)
 Frame = -1

Query: 1605 SGGAEWESSLSYLGKRFKHSIEGHKKSLGSTFNIPLDFIIDKCMLQEILSQYEYISDFSI 1426
            SGG+ WE  L   GK      +  K+SL S F IPLD IIDKC+LQEI+ QY Y+S  +I
Sbjct: 784  SGGSSWERLLGSFGKTVNVD-DTQKQSLLSAFEIPLDIIIDKCLLQEIMLQYNYVSKLAI 842

Query: 1425 MLLEEGFDLQGHLLALRRYYFMEFADWADLFIMSLWRHKWSVAEASQRISEIQGFLDLAV 1246
             +LEE F LQ HLLALRRY+FME ADWADLFI+SLW HKWSV EA++R+SEIQG L+L++
Sbjct: 843  NVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWHHKWSVTEANERLSEIQGLLELSI 902

Query: 1245 QRSSCEADPYKERLYLYKKGHVVVPLSTPGTGVHAFDFIALGYRVDWPVNIVLTRSALKT 1066
            Q+SSCE D +K+RL++Y KGH  +PLS    GV +FDF+ LGY V WP++IVLT +ALK 
Sbjct: 903  QKSSCEQDTHKDRLFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVQWPLSIVLTPAALKV 962

Query: 1065 YLDIFSFLIQVKLAVFSLTDVWSSMKDLVHLISQSHHCQLDEQEKTIFNILMKMRHQLNH 886
            Y DIFSFLIQVKLA+FSLTDVW S+KDLVH  +++ + ++ + E    N+LMKMRHQ+NH
Sbjct: 963  YADIFSFLIQVKLAIFSLTDVWCSLKDLVHTTNKNQNSEIHQLETGHLNMLMKMRHQINH 1022

Query: 885  FVSTLQQYVQSQLSDVSWCRFLHSLKHQVKDMFDLESVHMAYLTDSLHICFLSDQTRPVA 706
            FVSTLQQYV+SQLS VSWCRFLHSL+H+VKDM DLESVHM YL DSL ICFLSD+T+ V 
Sbjct: 1023 FVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLADSLCICFLSDETKAVG 1082

Query: 705  GIVESILQCALDFRSCFTGVIWEVGSDCRDSSRVLGGLNISQVLAIKAVFVKNLKELYLC 526
             I+ESILQCALDFRSC T   W+ GSD  D    L  +NISQVL+IK  F ++LKEL++C
Sbjct: 1083 SIIESILQCALDFRSCITVGSWDSGSDPEDLLGKLSKINISQVLSIKQKFDRSLKELHIC 1142

Query: 525  YLKSPKHGEFSLSRFWGYLNYNDYYSSIVGSGLVHYAL 412
            Y+K PKHG F LSRFW YLNYN+YYS+ V + + +YA+
Sbjct: 1143 YIKGPKHGNFGLSRFWDYLNYNEYYSN-VSNEMGYYAV 1179


>ref|XP_002515845.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223545000|gb|EEF46514.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 1209

 Score =  505 bits (1300), Expect = e-140
 Identities = 261/423 (61%), Positives = 310/423 (73%), Gaps = 3/423 (0%)
 Frame = -1

Query: 1707 EQNQGETV-VPVDQINS--YSVTLSGNRQEETASTNSSGGAEWESSLSYLGKRFKHSIEG 1537
            + N G+++ +  D++ S   S+ L    QE   S +  GG  WES LS      K S   
Sbjct: 784  QDNDGDSIFINNDKMASPFSSLYLKKQGQEALVSKDVYGGRSWESLLSKFSFIEKGSASE 843

Query: 1536 HKKSLGSTFNIPLDFIIDKCMLQEILSQYEYISDFSIMLLEEGFDLQGHLLALRRYYFME 1357
             K SL + F+IPLDFIIDKCMLQEIL QY+Y+S  +I +LE GFDL  H   LRRYYFME
Sbjct: 844  QKHSLSAMFDIPLDFIIDKCMLQEILLQYKYVSKLAIKILE-GFDLHEHYRVLRRYYFME 902

Query: 1356 FADWADLFIMSLWRHKWSVAEASQRISEIQGFLDLAVQRSSCEADPYKERLYLYKKGHVV 1177
             ADWADLFIMSLW HKW   EA QR+SEIQG L+L+VQRSSCE DP K+RLY+Y KG+ V
Sbjct: 903  IADWADLFIMSLWHHKWRTTEAGQRVSEIQGLLELSVQRSSCERDPNKDRLYVYIKGNAV 962

Query: 1176 VPLSTPGTGVHAFDFIALGYRVDWPVNIVLTRSALKTYLDIFSFLIQVKLAVFSLTDVWS 997
            +PL+T   GVH+FDF+ LGY VDWP++I+LT SALK Y DIFSFLIQVKLA+F+L+DVW 
Sbjct: 963  IPLATSAIGVHSFDFLGLGYHVDWPLSIILTPSALKIYSDIFSFLIQVKLAIFALSDVWR 1022

Query: 996  SMKDLVHLISQSHHCQLDEQEKTIFNILMKMRHQLNHFVSTLQQYVQSQLSDVSWCRFLH 817
            S+K L+  I       L     T F  L   R Q+NHF+STLQQYVQSQLS +SWCRFLH
Sbjct: 1023 SLKVLISRI-----LHLQTGNYTNFISLTYDRQQVNHFISTLQQYVQSQLSHISWCRFLH 1077

Query: 816  SLKHQVKDMFDLESVHMAYLTDSLHICFLSDQTRPVAGIVESILQCALDFRSCFTGVIWE 637
            +LK++VKDM DLESVHM YLTDSLHICFLSD+TRPVA I+ESILQCAL+FR+C T  IW+
Sbjct: 1078 NLKYKVKDMMDLESVHMEYLTDSLHICFLSDETRPVASIIESILQCALNFRACLTTSIWD 1137

Query: 636  VGSDCRDSSRVLGGLNISQVLAIKAVFVKNLKELYLCYLKSPKHGEFSLSRFWGYLNYND 457
            VG D       L  +NISQVLAIK  F KNLKEL+LCY KSPKHGEF L  FWG+LNYN+
Sbjct: 1138 VGLDEGGLRGKLSRINISQVLAIKQKFDKNLKELHLCYHKSPKHGEFGLYCFWGHLNYNE 1197

Query: 456  YYS 448
            YY+
Sbjct: 1198 YYT 1200


>ref|XP_002877284.1| tubulin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323122|gb|EFH53543.1| tubulin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1211

 Score =  459 bits (1181), Expect = e-126
 Identities = 225/406 (55%), Positives = 294/406 (72%), Gaps = 1/406 (0%)
 Frame = -1

Query: 1626 ETASTNSSGGAEWESSLSYLGKRFKHSIEGHKKSLGSTFNIPLDFIIDKCMLQEILSQYE 1447
            E   +N+ GG  WE  L         +    ++    TF +PLDF+IDKC+LQEI  QY 
Sbjct: 808  EEKKSNAFGGGRWEGMLRRSNNPETSAFSDRRQDSSGTFELPLDFVIDKCLLQEIHLQYN 867

Query: 1446 YISDFSIMLLEEGFDLQGHLLALRRYYFMEFADWADLFIMSLWRHKWSVAEASQRISEIQ 1267
            ++S  +I LLEEGF LQ HLLALRRY+FME ADWAD+F++SLW HKW V EA +RI+EIQ
Sbjct: 868  FVSKLAIKLLEEGFGLQEHLLALRRYHFMELADWADVFVVSLWHHKWLVTEADKRIAEIQ 927

Query: 1266 GFLDLAVQRSSCEADPYKERLYLYKK-GHVVVPLSTPGTGVHAFDFIALGYRVDWPVNIV 1090
            GFL+ ++QRSSCE D  K+RL+LYK+ G + +P ST   GV +FDF+ LGYRVDWP++I+
Sbjct: 928  GFLESSIQRSSCERDICKDRLFLYKRQGTMHIPPST--IGVRSFDFLRLGYRVDWPISII 985

Query: 1089 LTRSALKTYLDIFSFLIQVKLAVFSLTDVWSSMKDLVHLISQSHHCQLDEQEKTIFNILM 910
            LT  ALK Y D+FSFL+QVKLA + LTDVW S+KD+ H++ ++   ++ +QE    NILM
Sbjct: 986  LTCDALKAYADVFSFLVQVKLAAYVLTDVWCSLKDVRHMMHENKE-KILKQELRWLNILM 1044

Query: 909  KMRHQLNHFVSTLQQYVQSQLSDVSWCRFLHSLKHQVKDMFDLESVHMAYLTDSLHICFL 730
            K+RHQ+NHFV+ LQQYV S+LS VSW +FLHSLK +VKDM DLESVHMAYL+++L ICFL
Sbjct: 1045 KLRHQVNHFVTALQQYVHSELSHVSWSKFLHSLKIKVKDMMDLESVHMAYLSEALRICFL 1104

Query: 729  SDQTRPVAGIVESILQCALDFRSCFTGVIWEVGSDCRDSSRVLGGLNISQVLAIKAVFVK 550
            SD+TR ++ I+E+ILQCALDFRSC    I        DS     G+N SQV+ +K  F K
Sbjct: 1105 SDETRVISNIIENILQCALDFRSCLPRAIQSTDRVPNDSQTKTLGINTSQVMMVKQNFDK 1164

Query: 549  NLKELYLCYLKSPKHGEFSLSRFWGYLNYNDYYSSIVGSGLVHYAL 412
             LKEL+ C+++SPKHG+F LSRFW YLN+N YYS I+    + + +
Sbjct: 1165 ELKELHKCHMRSPKHGKFGLSRFWDYLNFNLYYSDILHDSNIFFLI 1210


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