BLASTX nr result

ID: Coptis21_contig00003716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003716
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521678.1| PREDICTED: unknown protein 1-like [Glycine max]    91   3e-16
ref|XP_002323104.1| predicted protein [Populus trichocarpa] gi|2...    89   2e-15
gb|ACU23123.1| unknown [Glycine max]                                   88   3e-15
ref|XP_004142723.1| PREDICTED: uncharacterized protein LOC101204...    87   4e-15
ref|XP_003548337.1| PREDICTED: unknown protein 1-like [Glycine max]    85   3e-14

>ref|XP_003521678.1| PREDICTED: unknown protein 1-like [Glycine max]
          Length = 190

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 59/147 (40%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
 Frame = +1

Query: 292 SPRTPKSCFVFDPFAPAPDNLMLAPRVHKCLTDSKFRVARRLNFGASSNDMVKDVVMLEE 471
           SPRTPK   VFDPFAP PDN+ LAP  +K L + +  VARRL+F  S  D+V   V    
Sbjct: 60  SPRTPKDG-VFDPFAPGPDNMALAPNSNKYLDEYRTTVARRLDFHPSF-DVVAQAVTDTL 117

Query: 472 EEQALLDKMYKSLLDFIVAKQ-----XXXXXXXXTPPKCGLLSGVADTCPAAPRKARLDG 636
            ++ +++ +Y++LL  IV+KQ             TPP     SG+ADTCP AP K     
Sbjct: 118 SDEEMVESVYENLLQVIVSKQAEGVLAQMSDDCETPPSVLHFSGIADTCPGAPIKPAAKP 177

Query: 637 MERVEGVKKLGLDFKKIDMGLCRKLNF 717
                         + ID+GLC+KL F
Sbjct: 178 --------------RNIDLGLCKKLEF 190


>ref|XP_002323104.1| predicted protein [Populus trichocarpa] gi|222867734|gb|EEF04865.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 62/158 (39%), Positives = 83/158 (52%), Gaps = 16/158 (10%)
 Frame = +1

Query: 292 SPRTPKSCFVFDPFAPAPDNLMLAPRVHKCLTDSKFRVARRLNFGAS-----SNDMVKDV 456
           SPRTPK   VFDPFAP  ++ +LAP+  K   +++  V RRLNF +S     +     DV
Sbjct: 74  SPRTPKDG-VFDPFAPGHEDKILAPQCKKYNDEARASVVRRLNFTSSFRALRNGSFGDDV 132

Query: 457 VMLEEEEQALLDKMYKSLLDFIVAKQ-----------XXXXXXXXTPPKCGLLSGVADTC 603
             L +EE  + + +Y+SLL+ IV+KQ                   TPP   +L+GV DTC
Sbjct: 133 EFLSDEE--MFESVYESLLEAIVSKQTEGALEEMTKLEWDSDDCTTPPAAPILTGVPDTC 190

Query: 604 PAAPRKARLDGMERVEGVKKLGLDFKKIDMGLCRKLNF 717
           PAAP K +  G  R+            ID+GLCRKL F
Sbjct: 191 PAAPLKRK--GKSRI------------IDLGLCRKLEF 214


>gb|ACU23123.1| unknown [Glycine max]
          Length = 190

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 58/147 (39%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
 Frame = +1

Query: 292 SPRTPKSCFVFDPFAPAPDNLMLAPRVHKCLTDSKFRVARRLNFGASSNDMVKDVVMLEE 471
           SPRTPK   VFDPFAP PDN+ LAP  +K L + +  VARRL+F  S  D+V   V    
Sbjct: 60  SPRTPKDG-VFDPFAPGPDNMALAPNSNKYLDEYRTTVARRLDFHPSF-DVVAQAVTDTL 117

Query: 472 EEQALLDKMYKSLLDFIVAKQ-----XXXXXXXXTPPKCGLLSGVADTCPAAPRKARLDG 636
            ++ +++ + ++LL  IV+KQ             TPP     SG+ADTCP AP K     
Sbjct: 118 SDEEMVESVCENLLQVIVSKQAEGVLAQMSDDCETPPSVLHFSGIADTCPGAPIKPAAKP 177

Query: 637 MERVEGVKKLGLDFKKIDMGLCRKLNF 717
                         + ID+GLC+KL F
Sbjct: 178 --------------RNIDLGLCKKLEF 190


>ref|XP_004142723.1| PREDICTED: uncharacterized protein LOC101204540 [Cucumis sativus]
           gi|449528083|ref|XP_004171036.1| PREDICTED:
           uncharacterized LOC101204540 [Cucumis sativus]
          Length = 233

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 67/171 (39%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
 Frame = +1

Query: 250 SDSPLTSSTPIIEF-SPRTPKSCFVFDPFAPAPDNLMLAPRVHKCLTDSKFRVARRLNFG 426
           +++PL SS       SPRTPK   VFDPF+PAP +L LAP   K  + S   V RRL FG
Sbjct: 80  TEAPLESSDSFDPLCSPRTPKDG-VFDPFSPAPAHLALAPISRKYFSGSVGFVPRRLQFG 138

Query: 427 ASSNDMVKDVVMLEEE----EQALLDKMYKSLLDFIVAKQXXXXXXXXT----------P 564
           +SS+ +   +V  EEE    +  LL+ +Y++LL+ IV+ Q        +           
Sbjct: 139 SSSSSL--QLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESSLAQLSSSQSDSPDCNT 196

Query: 565 PKCGLLSGVADTCPAAPRKARLDGMERVEGVKKLGLDFKKIDMGLCRKLNF 717
           P    +SGVA TCPAAP          V+  +KL    + +DMGLCRKL F
Sbjct: 197 PPTSFMSGVAQTCPAAP----------VKPSRKL----RNLDMGLCRKLEF 233


>ref|XP_003548337.1| PREDICTED: unknown protein 1-like [Glycine max]
          Length = 191

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 55/146 (37%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
 Frame = +1

Query: 295 PRTPKSCFVFDPFAPAPDNLMLAPRVHKCLTDSKFRVARRLNFGASSNDMVKDVVMLEEE 474
           PRTPK   VFDPFAP PDN+  AP  +K L + +  VARRL+F  S  D+V +       
Sbjct: 62  PRTPKDG-VFDPFAPGPDNMARAPNSNKYLDEYRTTVARRLDFHPSF-DVVAEADSDTLS 119

Query: 475 EQALLDKMYKSLLDFIVAKQ-----XXXXXXXXTPPKCGLLSGVADTCPAAPRKARLDGM 639
           ++ +++ +Y++LL  IV+KQ             TPP     +G+ADTCP AP K      
Sbjct: 120 DEKMVESVYENLLQVIVSKQAEGALAQMSDDCETPPSVLRFTGIADTCPGAPMKPAAKP- 178

Query: 640 ERVEGVKKLGLDFKKIDMGLCRKLNF 717
                        + ID GLC+KL F
Sbjct: 179 -------------RNIDFGLCKKLEF 191


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