BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003715
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137529.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   551   e-154
ref|XP_002514510.1| Succinyl-CoA ligase [GDP-forming] subunit al...   550   e-154
gb|ABK95068.1| unknown [Populus trichocarpa]                          548   e-153
ref|XP_002329684.1| predicted protein [Populus trichocarpa] gi|2...   547   e-153
ref|XP_003548295.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   546   e-153

>ref|XP_004137529.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-1,
            mitochondrial-like [Cucumis sativus]
          Length = 342

 Score =  551 bits (1419), Expect = e-154
 Identities = 279/310 (90%), Positives = 285/310 (91%), Gaps = 5/310 (1%)
 Frame = -1

Query: 1174 SNQSRHYTAAP-----VFVDHNTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGT 1010
            ++Q RHY+AAP     VFVD NTRVICQGITGKNGTFHTEQAIEYGT MVGGVTPKKGGT
Sbjct: 32   ASQIRHYSAAPSPPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT 91

Query: 1009 EHLGLPVFNSVAEAKAETKANASVIYVPPSFXXXXXXXXXXXELDLVVCITEGIPQHDMV 830
            EHLGLPVFNSVAEAKAETKANASVIYVPP F           ELDLVVCITEGIPQHDMV
Sbjct: 92   EHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMV 151

Query: 829  RVKAALKKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQT 650
            RVKAAL KQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGR+GIVSRSGTLTYEAVFQT
Sbjct: 152  RVKAALNKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQT 211

Query: 649  TAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLADPQTEGIVLIGEIGGTAEEDAAALIKES 470
            TAVGLGQSTCVGIGGDPFNGTNFVDC+ KFL DPQTEGIVLIGEIGGTAEEDAAALIKES
Sbjct: 212  TAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLVDPQTEGIVLIGEIGGTAEEDAAALIKES 271

Query: 469  GTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAM 290
            GTDKPIV FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGV+M
Sbjct: 272  GTDKPIVGFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVSM 331

Query: 289  LESFKQRGLV 260
            LE FKQRGLV
Sbjct: 332  LEVFKQRGLV 341


>ref|XP_002514510.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial
            precursor, putative [Ricinus communis]
            gi|223546409|gb|EEF47910.1| Succinyl-CoA ligase
            [GDP-forming] subunit alpha-2, mitochondrial precursor,
            putative [Ricinus communis]
          Length = 334

 Score =  550 bits (1416), Expect = e-154
 Identities = 284/332 (85%), Positives = 296/332 (89%), Gaps = 9/332 (2%)
 Frame = -1

Query: 1231 MSRQAT-KLIGYLRTANKPLSN---QSRHYTAAP-----VFVDHNTRVICQGITGKNGTF 1079
            M+RQA  KLIG + +    LS+   Q+R Y AA      VFVD NTRVICQGITGKNGTF
Sbjct: 1    MARQAVAKLIGSIASRKPSLSSSAIQTRQYAAAASPPAAVFVDKNTRVICQGITGKNGTF 60

Query: 1078 HTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPSFXXXXXX 899
            HTEQAIEYGT MVGGVTPKKGGTEHLGLPVFN+VAEAKAETKANASVIYVPP F      
Sbjct: 61   HTEQAIEYGTTMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFAAAAIM 120

Query: 898  XXXXXELDLVVCITEGIPQHDMVRVKAALKKQSKTRLIGPNCPGIIKPGECKIGIMPGYI 719
                 ELDLVVCITEGIPQHDMVRVKAAL +QSKTRLIGPNCPGIIKPGECKIGIMPGYI
Sbjct: 121  EAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYI 180

Query: 718  HKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLADPQTE 539
            HKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ KFLADPQTE
Sbjct: 181  HKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLADPQTE 240

Query: 538  GIVLIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQD 359
            GI+LIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQD
Sbjct: 241  GIILIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQD 300

Query: 358  KIKTLREAGVTVVESPAKIGVAMLESFKQRGL 263
            KIKTL+EAGVTVVESPAKIGVAML+ FKQRGL
Sbjct: 301  KIKTLKEAGVTVVESPAKIGVAMLDVFKQRGL 332


>gb|ABK95068.1| unknown [Populus trichocarpa]
          Length = 331

 Score =  548 bits (1412), Expect = e-153
 Identities = 280/330 (84%), Positives = 295/330 (89%), Gaps = 6/330 (1%)
 Frame = -1

Query: 1231 MSRQATKLIGYLRTANKPLS-NQSRHYTAAP-----VFVDHNTRVICQGITGKNGTFHTE 1070
            MSRQA +L+  L +     S +QSR +TAAP     VFVD NTRVICQGITGKNGTFHTE
Sbjct: 1    MSRQAKRLVSSLSSKISSFSYSQSRSFTAAPPPPPAVFVDKNTRVICQGITGKNGTFHTE 60

Query: 1069 QAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPSFXXXXXXXXX 890
            QAIEYGT MVGGVTPKKGGTEHLGLPVFNSV+EAKAETKANASVIYVPP F         
Sbjct: 61   QAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVSEAKAETKANASVIYVPPPFAAAAILEAV 120

Query: 889  XXELDLVVCITEGIPQHDMVRVKAALKKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKP 710
              ELDLVVCITEGIPQHDMVRVKAA+KKQ+KTRLIGPNCPGIIKPGECKIGIMPGYIHKP
Sbjct: 121  EAELDLVVCITEGIPQHDMVRVKAAIKKQTKTRLIGPNCPGIIKPGECKIGIMPGYIHKP 180

Query: 709  GRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLADPQTEGIV 530
            GRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ KFLADPQTEGIV
Sbjct: 181  GRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVEKFLADPQTEGIV 240

Query: 529  LIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIK 350
            LIGEIGGTAEEDAA LIKESGT+KP+VAFIAG+TAPPGRRMGHAGAIVSGGKGTAQDKIK
Sbjct: 241  LIGEIGGTAEEDAATLIKESGTEKPVVAFIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIK 300

Query: 349  TLREAGVTVVESPAKIGVAMLESFKQRGLV 260
            TLR+AGV VVESPAKIG AML+ FK+RGLV
Sbjct: 301  TLRDAGVIVVESPAKIGTAMLDVFKERGLV 330


>ref|XP_002329684.1| predicted protein [Populus trichocarpa] gi|222870592|gb|EEF07723.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  547 bits (1409), Expect = e-153
 Identities = 277/328 (84%), Positives = 291/328 (88%), Gaps = 5/328 (1%)
 Frame = -1

Query: 1231 MSRQATKLIGYLRTANKPLSNQSRHYTAAP-----VFVDHNTRVICQGITGKNGTFHTEQ 1067
            M+RQA   I  L   +   + Q+RHY AAP     VFVD NTRVICQGITGKNGTFHTEQ
Sbjct: 1    MARQAPSSINSLLNLSPSSAAQTRHYAAAPPPPPAVFVDKNTRVICQGITGKNGTFHTEQ 60

Query: 1066 AIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPSFXXXXXXXXXX 887
            AIEYGT MVGGVTPKKGGTEHLGLPVFN+VAEAKAETKANASVIYVPP F          
Sbjct: 61   AIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFAAAAILEAME 120

Query: 886  XELDLVVCITEGIPQHDMVRVKAALKKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPG 707
             EL+LVVCITEGIPQHDMVRVKAAL +Q+KTRLIGPNCPGIIKPGECKIGIMP YIHKPG
Sbjct: 121  AELNLVVCITEGIPQHDMVRVKAALNRQTKTRLIGPNCPGIIKPGECKIGIMPAYIHKPG 180

Query: 706  RVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLADPQTEGIVL 527
            R+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ KFL DPQTEGI+L
Sbjct: 181  RIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLVDPQTEGIIL 240

Query: 526  IGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKT 347
            IGEIGGTAEEDAAALIKESGT+KP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKT
Sbjct: 241  IGEIGGTAEEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKT 300

Query: 346  LREAGVTVVESPAKIGVAMLESFKQRGL 263
            LREAGVTVVESPAKIGVAML+ FKQRGL
Sbjct: 301  LREAGVTVVESPAKIGVAMLDVFKQRGL 328


>ref|XP_003548295.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-1,
            mitochondrial-like [Glycine max]
          Length = 325

 Score =  546 bits (1406), Expect = e-153
 Identities = 280/328 (85%), Positives = 295/328 (89%), Gaps = 3/328 (0%)
 Frame = -1

Query: 1231 MSRQA-TKLIGYLRTANKPLSNQSRHYTAAP--VFVDHNTRVICQGITGKNGTFHTEQAI 1061
            M+RQA TKL+  + +      +  RH++AA   VFVD +TRVICQGITGKNGTFHTEQAI
Sbjct: 1    MARQALTKLLSSIASRRH---HGLRHFSAASPAVFVDKSTRVICQGITGKNGTFHTEQAI 57

Query: 1060 EYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPSFXXXXXXXXXXXE 881
            EYGTNMVGGVTPKKGGTEHLGLPVFN+VAEAKAETKANASVIYVPP F           E
Sbjct: 58   EYGTNMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFAAAAIMEAMEAE 117

Query: 880  LDLVVCITEGIPQHDMVRVKAALKKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRV 701
            LDLVVCITEGIPQHDMVRVKAAL +QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGR+
Sbjct: 118  LDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRI 177

Query: 700  GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLADPQTEGIVLIG 521
            GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCL KFL DPQTEGI+LIG
Sbjct: 178  GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLQKFLTDPQTEGIILIG 237

Query: 520  EIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLR 341
            EIGGTAEEDAAALIKESGT+KP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLR
Sbjct: 238  EIGGTAEEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLR 297

Query: 340  EAGVTVVESPAKIGVAMLESFKQRGLVQ 257
            EAGVTVVESPAKIG AML+ FKQRGLVQ
Sbjct: 298  EAGVTVVESPAKIGAAMLDVFKQRGLVQ 325