BLASTX nr result

ID: Coptis21_contig00003714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003714
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40150.1| unknown [Lotus japonicus]                               80   3e-13
ref|NP_001236970.1| uncharacterized protein LOC100500112 [Glycin...    79   6e-13
ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycin...    79   1e-12
gb|ACJ83894.1| unknown [Medicago truncatula]                           77   2e-12
ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Gl...    77   3e-12

>gb|AFK40150.1| unknown [Lotus japonicus]
          Length = 217

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 68/182 (37%), Positives = 82/182 (45%), Gaps = 11/182 (6%)
 Frame = -3

Query: 535 MGKS*DLMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIHVRGGNVKWRA-- 362
           MG S D MH                KYELGRQPANTKLSSNKTVRRI VRGGNVKWRA  
Sbjct: 1   MGISRDSMHKRRATGGKQKTWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 361 -QIGHW*LLIGWRGCHSKDLYP*CCLQCFQVPTTSLSGLRTWLRVLLCRL--------ML 209
              G++     W G  +           +      L   +T ++  + ++         L
Sbjct: 61  LDTGNF----SW-GSETVTRKTRLLDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYL 115

Query: 208 HHLGSGAFGTMVVLIMKKKPAAKKEGVEEGDATAEQIXXXXXXXXXXXKRQVE*KLDS*I 29
            H G       V +  KKK AAKK+  EEG+A AE              RQ +  LDS I
Sbjct: 116 QHYG-------VEIGRKKKTAAKKDSTEEGEAVAEDTKKSNHVQRKLENRQKDRTLDSHI 168

Query: 28  EE 23
           EE
Sbjct: 169 EE 170


>ref|NP_001236970.1| uncharacterized protein LOC100500112 [Glycine max]
           gi|255629291|gb|ACU14990.1| unknown [Glycine max]
          Length = 217

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 68/184 (36%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
 Frame = -3

Query: 535 MGKS*DLMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIHVRGGNVKWRA-- 362
           MG S D MH                KYELGRQ ANTKLSSNKT+RRI VRGGNVKWRA  
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQAANTKLSSNKTIRRIRVRGGNVKWRALR 60

Query: 361 -QIGH--W*LLIGWRGCHSKDLYP*CCLQCFQVPTTSLSGLRTWLRVLLCRL-------- 215
              G+  W      R   + D+        +      L   +T ++  + ++        
Sbjct: 61  LDTGNYSWGSEAVTRKTRTLDV-------VYNASNNELVRTQTLVKNAIVQVDAAPFKQW 113

Query: 214 MLHHLGSGAFGTMVVLIMKKKPAAKKEGVEEGDATAEQIXXXXXXXXXXXKRQVE*KLDS 35
            L H G       V +  KKK A+KK+  EEG+A AE+            KRQ + KLDS
Sbjct: 114 YLQHYG-------VEIGRKKKVASKKDSTEEGEAAAEETKKSNHVQRKLEKRQKDRKLDS 166

Query: 34  *IEE 23
            IEE
Sbjct: 167 HIEE 170


>ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycine max]
           gi|255636051|gb|ACU18370.1| unknown [Glycine max]
          Length = 217

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 67/182 (36%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
 Frame = -3

Query: 535 MGKS*DLMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIHVRGGNVKWRA-- 362
           MG S D MH                KYELGRQ ANTKLSSNKT+RRI VRGGNVKWRA  
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQAANTKLSSNKTIRRIRVRGGNVKWRALR 60

Query: 361 -QIGHW*LLIGWRGCHSKDLYP*CCLQCFQVPTTSLSGLRTWLRVLLCRL--------ML 209
              G++     W G  +           +      L   +T ++  + ++         L
Sbjct: 61  LDTGNY----SW-GSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYL 115

Query: 208 HHLGSGAFGTMVVLIMKKKPAAKKEGVEEGDATAEQIXXXXXXXXXXXKRQVE*KLDS*I 29
            H G       V +  KKK AAKK+  EEG+A AE+            KRQ +  LDS I
Sbjct: 116 QHYG-------VEIGRKKKVAAKKDSTEEGEAAAEETKKSNHVQRKLEKRQKDRNLDSHI 168

Query: 28  EE 23
           EE
Sbjct: 169 EE 170


>gb|ACJ83894.1| unknown [Medicago truncatula]
          Length = 216

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 60/151 (39%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
 Frame = -3

Query: 457 YELGRQPANTKLSSNKTVRRIHVRGGNVKWRA-QIGHW*LLIGWRGCHSKD-----LYP* 296
           YELGRQPANTKLSSNKTVRRI VRGGNVKWRA ++G      G      K      +Y  
Sbjct: 26  YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLGTGNFSWGSEAVTRKTRLLDVVYNA 85

Query: 295 CCLQCFQVPTTSLSGLRTWLRVLLCRLMLHHLGSGAFGTMVVLIMKKKPAAKKEGVEEGD 116
              +  +  T   S +         +  L H G       V +  KKK AAKK+  EE +
Sbjct: 86  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYG-------VEVGRKKKTAAKKDSAEEAE 138

Query: 115 ATAEQIXXXXXXXXXXXKRQVE*KLDS*IEE 23
             AE++           +RQ + +LDS IEE
Sbjct: 139 VVAEEVKKSSHVQRKLEQRQKDRQLDSHIEE 169


>ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
          Length = 220

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 70/185 (37%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
 Frame = -3

Query: 535 MGKS*DLMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIHVRGGNVKWRA-- 362
           MG S D MH                KYELGRQPANTKLSSNKTVRRI VRGGNVKWRA  
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 361 -QIGHW*LLIGWRGCHSKDLYP*CCLQCFQVPTTSLSGLRTWLRVLLCRL--------ML 209
              G++     W G  +           +      L   +T ++  + ++         L
Sbjct: 61  LDTGNY----SW-GSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL 115

Query: 208 HHLGSGAFGTMVVLIMKKKPAAKKEGVEEGD---ATAEQIXXXXXXXXXXXKRQVE*KLD 38
            H G       V +  KKK AAKKE  EEG    A AE+            KRQ + KLD
Sbjct: 116 QHYG-------VEIGRKKKTAAKKETAEEGGDAAAAAEEAKKSNHVQRKLEKRQKDRKLD 168

Query: 37  S*IEE 23
           + IEE
Sbjct: 169 AHIEE 173


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