BLASTX nr result

ID: Coptis21_contig00003713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003713
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523830.1| 40S ribosomal protein S14, putative [Ricinus...   230   3e-58
ref|XP_004149195.1| PREDICTED: 40S ribosomal protein S14-2-like ...   229   7e-58
gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus]     229   7e-58
gb|ACF06620.1| ribosomal protein S14 [Elaeis guineensis]              229   7e-58
gb|ADV38313.1| putative ribosomal protein S14 [Wolffia arrhiza]       228   2e-57

>ref|XP_002523830.1| 40S ribosomal protein S14, putative [Ricinus communis]
           gi|223536918|gb|EEF38556.1| 40S ribosomal protein S14,
           putative [Ricinus communis]
          Length = 150

 Score =  230 bits (586), Expect = 3e-58
 Identities = 120/139 (86%), Positives = 122/139 (87%)
 Frame = -1

Query: 757 MSKRKVREPKEETVILGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMK 578
           MSK+K REPKEE V LGPA+ EGE VFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMK
Sbjct: 1   MSKKKTREPKEENVTLGPAIREGEHVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMK 60

Query: 577 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALAR 398
           VKADRDESSPYAAMLAAQDV QRCKELGITALHIKLRA           GAQSALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVTQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 397 SGMKIGRIEDVTPIPTDST 341
           SGMKIGRIEDVTPIPTDST
Sbjct: 121 SGMKIGRIEDVTPIPTDST 139


>ref|XP_004149195.1| PREDICTED: 40S ribosomal protein S14-2-like [Cucumis sativus]
           gi|449462948|ref|XP_004149197.1| PREDICTED: 40S
           ribosomal protein S14-2-like [Cucumis sativus]
           gi|449500886|ref|XP_004161220.1| PREDICTED: 40S
           ribosomal protein S14-2-like [Cucumis sativus]
           gi|449500891|ref|XP_004161222.1| PREDICTED: 40S
           ribosomal protein S14-2-like [Cucumis sativus]
          Length = 150

 Score =  229 bits (583), Expect = 7e-58
 Identities = 119/139 (85%), Positives = 124/139 (89%)
 Frame = -1

Query: 757 MSKRKVREPKEETVILGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMK 578
           MS+RK REPKEETV LGPAV EGE VFGVAHI+ASFNDTFIHVTDLSGRET+VRITGGMK
Sbjct: 1   MSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60

Query: 577 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALAR 398
           VKADRDESSPYAAMLAAQDV+QRCKELGITALHIKLRA           GAQSALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 397 SGMKIGRIEDVTPIPTDST 341
           SGM+IGRIEDVTPIPTDST
Sbjct: 121 SGMRIGRIEDVTPIPTDST 139


>gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus]
          Length = 150

 Score =  229 bits (583), Expect = 7e-58
 Identities = 117/139 (84%), Positives = 124/139 (89%)
 Frame = -1

Query: 757 MSKRKVREPKEETVILGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMK 578
           MS+RK REPKEETV LGPAV +GEQVFGV HI+ASFNDTFIHVTDLSGRET+VRITGGMK
Sbjct: 1   MSRRKTREPKEETVTLGPAVRDGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 60

Query: 577 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALAR 398
           VKADRDESSPYAAMLAAQDVAQRCKELGITA+H+KLRA           GAQSALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 397 SGMKIGRIEDVTPIPTDST 341
           SGMKIGRIEDVTP+PTDST
Sbjct: 121 SGMKIGRIEDVTPVPTDST 139


>gb|ACF06620.1| ribosomal protein S14 [Elaeis guineensis]
          Length = 150

 Score =  229 bits (583), Expect = 7e-58
 Identities = 120/139 (86%), Positives = 122/139 (87%)
 Frame = -1

Query: 757 MSKRKVREPKEETVILGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMK 578
           MS+RK REPKEE V LGP V EGE VFGVAHI+ASFNDTFIHVTDLSGRETMVRITGGMK
Sbjct: 1   MSRRKTREPKEENVTLGPTVREGEHVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMK 60

Query: 577 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALAR 398
           VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA           GAQSALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 397 SGMKIGRIEDVTPIPTDST 341
           SGMKIGRIEDVTPIPTDST
Sbjct: 121 SGMKIGRIEDVTPIPTDST 139


>gb|ADV38313.1| putative ribosomal protein S14 [Wolffia arrhiza]
          Length = 150

 Score =  228 bits (580), Expect = 2e-57
 Identities = 118/139 (84%), Positives = 123/139 (88%)
 Frame = -1

Query: 757 MSKRKVREPKEETVILGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMK 578
           MS+RK REPKEE V LGPAV +GE VFGVAH++ASFNDTFIHVTDLSGRET+VRITGGMK
Sbjct: 1   MSRRKTREPKEENVTLGPAVRDGEHVFGVAHVFASFNDTFIHVTDLSGRETLVRITGGMK 60

Query: 577 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALAR 398
           VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA           GAQSALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 397 SGMKIGRIEDVTPIPTDST 341
           SGMKIGRIEDVTPIPTDST
Sbjct: 121 SGMKIGRIEDVTPIPTDST 139


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