BLASTX nr result

ID: Coptis21_contig00003699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003699
         (1463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus...   532   e-149
emb|CBI18797.3| unnamed protein product [Vitis vinifera]              531   e-148
ref|XP_004149732.1| PREDICTED: porphobilinogen deaminase, chloro...   521   e-145
ref|XP_003607331.1| Porphobilinogen deaminase [Medicago truncatu...   521   e-145
ref|NP_001242644.1| uncharacterized protein LOC100812733 [Glycin...   521   e-145

>ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus communis]
            gi|223540457|gb|EEF42025.1| porphobilinogen deaminase,
            putative [Ricinus communis]
          Length = 372

 Score =  532 bits (1371), Expect = e-149
 Identities = 272/341 (79%), Positives = 309/341 (90%), Gaps = 5/341 (1%)
 Frame = -3

Query: 1278 PSFKTQ---VSRKLVVTRATVVTDQQLQT-KVSLIRIGTRGSPLALAQAYETRAKLISLH 1111
            P FK+      + L +TRA+V  +QQ Q  KV+LIRIGTRGSPLALAQA+ETR KL++ H
Sbjct: 31   PQFKSPNCIKKQSLRITRASVAVEQQTQDPKVALIRIGTRGSPLALAQAHETRDKLMAKH 90

Query: 1110 SELAEEGAIDIVIIKTTGDKILDQPLADIGGKGLFTKEIDEALLNSDIDIAVHSMKDVPT 931
            SELAEEGAI IVIIKTTGDKIL QPLADIGGKGLFTKEIDEAL+N +IDIAVHSMKDVPT
Sbjct: 91   SELAEEGAIQIVIIKTTGDKILTQPLADIGGKGLFTKEIDEALINGEIDIAVHSMKDVPT 150

Query: 930  YLPNGTILPCNLPREDVRDAFISLSAASLAELPPGSVVGSASLRRQSQILYRYPALKV-E 754
            YLP  TILPCNLPREDVRDAFISLSA+SLAELP GSV+G+ASLRR+SQIL+RYP+L V E
Sbjct: 151  YLPEKTILPCNLPREDVRDAFISLSASSLAELPSGSVIGTASLRRKSQILHRYPSLSVLE 210

Query: 753  NFRGNVQTRLKKLNEGKVQATLLALAGLKRLNMTDKVTAILSIEEMLPAIAQGAIGIACR 574
            NFRGNVQTRL+KLNEG VQATLLALAGLKRLNMT+ VT++LSI++MLPA+AQGAIGIACR
Sbjct: 211  NFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTENVTSVLSIDDMLPAVAQGAIGIACR 270

Query: 573  TNDDKMANYIASLNHEETRLAVSCERAFLETLDGSCRTPIAGYAYRDKEGNCVFRGLVAS 394
            +NDDKMANY+ASLNHEETRLAV+CERAFLETLDGSCRTPIAGYA +D+ G+C+F+GLVAS
Sbjct: 271  SNDDKMANYLASLNHEETRLAVACERAFLETLDGSCRTPIAGYASKDENGDCIFKGLVAS 330

Query: 393  PDGTRVLETSRKGPYVLEDMVIMAKDAGEELRKRAGPGFFD 271
            PDGTRVLETSRKGPY L+DM++M KDAG+EL  +AGPGFFD
Sbjct: 331  PDGTRVLETSRKGPYALDDMIMMGKDAGKELLLQAGPGFFD 371


>emb|CBI18797.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  531 bits (1367), Expect = e-148
 Identities = 268/327 (81%), Positives = 302/327 (92%), Gaps = 2/327 (0%)
 Frame = -3

Query: 1245 VVTRATVVTDQQL-QTKVSLIRIGTRGSPLALAQAYETRAKLISLHSELAEEGAIDIVII 1069
            +V RA++  +Q+  +TKV+L+RIGTRGSPLALAQAYETR KL++ HSELAEEGAI IV+I
Sbjct: 1    MVIRASIAVEQETHKTKVALVRIGTRGSPLALAQAYETRDKLMAAHSELAEEGAIQIVVI 60

Query: 1068 KTTGDKILDQPLADIGGKGLFTKEIDEALLNSDIDIAVHSMKDVPTYLPNGTILPCNLPR 889
            KTTGDKIL QPLADIGGKGLFTKEIDEALLN DIDIAVHSMKDVPTYLP+ TILPCNLPR
Sbjct: 61   KTTGDKILTQPLADIGGKGLFTKEIDEALLNGDIDIAVHSMKDVPTYLPDKTILPCNLPR 120

Query: 888  EDVRDAFISLSAASLAELPPGSVVGSASLRRQSQILYRYPALKV-ENFRGNVQTRLKKLN 712
            EDVRDAFISL+AASL+ELP GS+VG+ASLRR+SQ+L+RY +L V ENFRGNVQTRL+KLN
Sbjct: 121  EDVRDAFISLTAASLSELPAGSIVGTASLRRKSQLLHRYKSLNVLENFRGNVQTRLRKLN 180

Query: 711  EGKVQATLLALAGLKRLNMTDKVTAILSIEEMLPAIAQGAIGIACRTNDDKMANYIASLN 532
            EG VQATLLALAGLKRLNMT+ VT+ILSI+EMLPA+AQGAIGIACR+NDDKMANY+ASLN
Sbjct: 181  EGVVQATLLALAGLKRLNMTENVTSILSIDEMLPAVAQGAIGIACRSNDDKMANYLASLN 240

Query: 531  HEETRLAVSCERAFLETLDGSCRTPIAGYAYRDKEGNCVFRGLVASPDGTRVLETSRKGP 352
            HE TRLAV+CERAFLETLDGSCRTPIAGYA  D++GNC+F+GLVASPDGT+VLETSRKGP
Sbjct: 241  HEVTRLAVACERAFLETLDGSCRTPIAGYASHDEDGNCIFKGLVASPDGTKVLETSRKGP 300

Query: 351  YVLEDMVIMAKDAGEELRKRAGPGFFD 271
            Y LEDM+ M KDAGEEL  RAGPGFFD
Sbjct: 301  YALEDMIKMGKDAGEELLSRAGPGFFD 327


>ref|XP_004149732.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like [Cucumis
            sativus]
          Length = 375

 Score =  521 bits (1342), Expect = e-145
 Identities = 263/340 (77%), Positives = 300/340 (88%), Gaps = 3/340 (0%)
 Frame = -3

Query: 1281 PPSFKTQVSR--KLVVTRATVVTDQQLQTKVSLIRIGTRGSPLALAQAYETRAKLISLHS 1108
            PP+F     +   + + RA     Q  +TKV+L+RIGTRGSPLALAQA+ETR KL++ H 
Sbjct: 35   PPTFSNGAKKFHGVGLIRAVAAEQQVEKTKVALLRIGTRGSPLALAQAHETRDKLMASHP 94

Query: 1107 ELAEEGAIDIVIIKTTGDKILDQPLADIGGKGLFTKEIDEALLNSDIDIAVHSMKDVPTY 928
            ELAE+GAI IV+IKTTGDKIL QPLADIGGKGLFTKEID+AL+N DIDIAVHSMKDVPTY
Sbjct: 95   ELAEDGAIQIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTY 154

Query: 927  LPNGTILPCNLPREDVRDAFISLSAASLAELPPGSVVGSASLRRQSQILYRYPALKV-EN 751
            LP  TILPCNLPREDVRDAFISLSA S AELP GS++G+ASLRR+SQ+L RYP+LKV EN
Sbjct: 155  LPEKTILPCNLPREDVRDAFISLSAGSFAELPAGSIIGTASLRRKSQLLNRYPSLKVLEN 214

Query: 750  FRGNVQTRLKKLNEGKVQATLLALAGLKRLNMTDKVTAILSIEEMLPAIAQGAIGIACRT 571
            FRGNVQTRL+KLNEG VQATLLALAGL+RLNMT+ VT+ILSI+EMLPA+AQGAIGIACR+
Sbjct: 215  FRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRS 274

Query: 570  NDDKMANYIASLNHEETRLAVSCERAFLETLDGSCRTPIAGYAYRDKEGNCVFRGLVASP 391
            +DD MANY+ASLNHEETRLAV CERAFLETLDGSCRTPIAGYA RD++GNC+F+GLVASP
Sbjct: 275  DDDIMANYLASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASP 334

Query: 390  DGTRVLETSRKGPYVLEDMVIMAKDAGEELRKRAGPGFFD 271
            DGTRVLETSR+GPY +EDM+ M KDAG+EL  RAGPGFFD
Sbjct: 335  DGTRVLETSRRGPYAIEDMIAMGKDAGQELLSRAGPGFFD 374


>ref|XP_003607331.1| Porphobilinogen deaminase [Medicago truncatula]
            gi|355508386|gb|AES89528.1| Porphobilinogen deaminase
            [Medicago truncatula]
          Length = 369

 Score =  521 bits (1342), Expect = e-145
 Identities = 266/336 (79%), Positives = 297/336 (88%), Gaps = 1/336 (0%)
 Frame = -3

Query: 1275 SFKTQVSRKLVVTRATVVTDQQLQTKVSLIRIGTRGSPLALAQAYETRAKLISLHSELAE 1096
            SFK     K  +  +  V  Q  QTK ++IRIGTRGSPLALAQA+ETR KLI+ H+ELAE
Sbjct: 33   SFKIPPFSKCRIRASVAVEQQTQQTKTAIIRIGTRGSPLALAQAHETRDKLIASHTELAE 92

Query: 1095 EGAIDIVIIKTTGDKILDQPLADIGGKGLFTKEIDEALLNSDIDIAVHSMKDVPTYLPNG 916
            EGAI IVIIKTTGDKIL QPLADIGGKGLFTKEIDEAL+N DIDIAVHSMKDVPTYLP  
Sbjct: 93   EGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMKDVPTYLPEK 152

Query: 915  TILPCNLPREDVRDAFISLSAASLAELPPGSVVGSASLRRQSQILYRYPALKVE-NFRGN 739
            TILPCNLPREDVRDAFISLSAASLA+LP GSV+G+ASLRR+SQIL+RYP+L V+ NFRGN
Sbjct: 153  TILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYPSLSVQDNFRGN 212

Query: 738  VQTRLKKLNEGKVQATLLALAGLKRLNMTDKVTAILSIEEMLPAIAQGAIGIACRTNDDK 559
            VQTRL+KL+EG V+ATLLALAGLKRLNMT+ VT+ LSI++MLPA+AQGAIGIACR+NDDK
Sbjct: 213  VQTRLRKLSEGVVKATLLALAGLKRLNMTENVTSTLSIDDMLPAVAQGAIGIACRSNDDK 272

Query: 558  MANYIASLNHEETRLAVSCERAFLETLDGSCRTPIAGYAYRDKEGNCVFRGLVASPDGTR 379
            MA Y+ASLNHEETRLA+SCERAFL TLDGSCRTPIAGYA RDK+GNC+FRGLVASPDGTR
Sbjct: 273  MAEYLASLNHEETRLAISCERAFLTTLDGSCRTPIAGYASRDKDGNCLFRGLVASPDGTR 332

Query: 378  VLETSRKGPYVLEDMVIMAKDAGEELRKRAGPGFFD 271
            VLETSR GPY  EDM+ M +DAGEEL  RAGPGFF+
Sbjct: 333  VLETSRIGPYAYEDMMKMGRDAGEELLSRAGPGFFN 368


>ref|NP_001242644.1| uncharacterized protein LOC100812733 [Glycine max]
            gi|255635113|gb|ACU17914.1| unknown [Glycine max]
          Length = 350

 Score =  521 bits (1341), Expect = e-145
 Identities = 268/338 (79%), Positives = 300/338 (88%), Gaps = 3/338 (0%)
 Frame = -3

Query: 1278 PSFKTQVSR--KLVVTRATVVTDQQLQTKVSLIRIGTRGSPLALAQAYETRAKLISLHSE 1105
            PSF+ + S   K  +  +  V  Q  QTKV+L+RIGTRGSPLALAQAYETR KL++ H+E
Sbjct: 11   PSFRIRTSAFSKCGIRASIAVEQQTSQTKVALLRIGTRGSPLALAQAYETRDKLMASHAE 70

Query: 1104 LAEEGAIDIVIIKTTGDKILDQPLADIGGKGLFTKEIDEALLNSDIDIAVHSMKDVPTYL 925
            LAEEGAI IVIIKTTGDKIL QPLADIGGKGLFTKEIDEAL+N DIDIAVHSMKDVPTYL
Sbjct: 71   LAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMKDVPTYL 130

Query: 924  PNGTILPCNLPREDVRDAFISLSAASLAELPPGSVVGSASLRRQSQILYRYPALKVE-NF 748
            P+ TILPCNLPREDVRDAFISLSAASLA+LP GS+VG+ASLRR+SQIL+RYP+L VE NF
Sbjct: 131  PDKTILPCNLPREDVRDAFISLSAASLADLPSGSIVGTASLRRKSQILHRYPSLNVEENF 190

Query: 747  RGNVQTRLKKLNEGKVQATLLALAGLKRLNMTDKVTAILSIEEMLPAIAQGAIGIACRTN 568
            RGNVQTRL+KL+EG VQATLLALAGLKRLNMT+ VT+ILSI++MLPA+AQGAIGIACR+N
Sbjct: 191  RGNVQTRLRKLSEGIVQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIGIACRSN 250

Query: 567  DDKMANYIASLNHEETRLAVSCERAFLETLDGSCRTPIAGYAYRDKEGNCVFRGLVASPD 388
            DDKMA Y+ASLNHEETRLAVSCERAFLE L+GSCRTPIAGYA R+++GNC+FRGLVASPD
Sbjct: 251  DDKMAEYLASLNHEETRLAVSCERAFLEKLEGSCRTPIAGYASRNEDGNCLFRGLVASPD 310

Query: 387  GTRVLETSRKGPYVLEDMVIMAKDAGEELRKRAGPGFF 274
            G RVLETSR GPY  ED + M KDAGEEL  RAGPGFF
Sbjct: 311  GIRVLETSRIGPYAFEDTIKMGKDAGEELLSRAGPGFF 348


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