BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003690
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera...   347   6e-93
ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]   335   2e-89
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin...   332   1e-88
ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|2...   327   6e-87
ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communi...   323   5e-86

>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
            gi|297743215|emb|CBI36082.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  347 bits (889), Expect = 6e-93
 Identities = 187/304 (61%), Positives = 214/304 (70%), Gaps = 10/304 (3%)
 Frame = +2

Query: 161  LFFQDLATPISTHRGKFTSPGQAAAVSALWRENFGGTDPPPPPVFTLEDRVDFSPE--LV 334
            LFFQDLA+P+S+ RGKFTS GQAAAVSALW +NF G+D PPPP++TLEDR DFSPE  ++
Sbjct: 16   LFFQDLASPVSSRRGKFTSSGQAAAVSALWHDNFAGSDLPPPPMYTLEDRSDFSPESGIL 75

Query: 335  DYP-------DFKTPVLATPLXXXXXXXXXXGGPNVKXXXXXXXXXXXXXXXXXXXXXXP 493
            DYP       D +TPV  +                                        P
Sbjct: 76   DYPVSPEIKSDLRTPVHGSGRDFLTPVKGKSEASTSSASLSWWSPAKSGGDQEEKGKGSP 135

Query: 494  VNGVVNSGSLITLPPAREVVRPDLQRTSFPVGDLDEEEWVTVYGFSPGDTNLVLREFEKC 673
            V GVV  G+LITLPP REV RP++QR   P G+LDEEEWVTVYGFSPGDTNLVLREFEKC
Sbjct: 136  VEGVVQPGALITLPPPREVARPEMQRNCLPAGNLDEEEWVTVYGFSPGDTNLVLREFEKC 195

Query: 674  GTILKHVPGPRTANWMHILYQSRFDAHKALSKSGMQINGVLIVGVKLLDPIQRQALSEAP 853
            G ILKHVPGPR ANW+HILYQ+R DA KALSK+GMQINGVLIVGVK LDP+QRQAL+E  
Sbjct: 196  GVILKHVPGPRDANWIHILYQNRSDAQKALSKNGMQINGVLIVGVKPLDPMQRQALNERL 255

Query: 854  NGNQGFMTL-PPASSRTTELIPSKLSPRPYHLXXXXXXXXHSAGVIASPAKSVVSKIVDL 1030
            N NQGFMTL PPASSR+ E  P ++SPRPY+L         S+G IASPAKSVVSKI+DL
Sbjct: 256  N-NQGFMTLPPPASSRSLESNPLRVSPRPYYL-QNGSNARQSSGAIASPAKSVVSKIMDL 313

Query: 1031 MFGI 1042
            MFG+
Sbjct: 314  MFGV 317


>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
          Length = 331

 Score =  335 bits (858), Expect = 2e-89
 Identities = 183/319 (57%), Positives = 214/319 (67%), Gaps = 25/319 (7%)
 Frame = +2

Query: 161  LFFQDLATPISTHRGKFTSPGQAAAVSALWRENFGGTDPPPPPVFTLEDRVDFSPE--LV 334
            LFFQDLA+P+S  RGKF+SPGQAAAVS+LWRENFG +D PPPPVFTLEDR DFSPE  ++
Sbjct: 16   LFFQDLASPVSARRGKFSSPGQAAAVSSLWRENFGSSDLPPPPVFTLEDRSDFSPESGIL 75

Query: 335  DYP-------DFKTPV------LATPLXXXXXXXXXX----------GGPNVKXXXXXXX 445
            DY        D +TP+       +TPL                    G P +        
Sbjct: 76   DYQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYALRGVQQNQQGSPGLSWWSPTTA 135

Query: 446  XXXXXXXXXXXXXXXPVNGVVNSGSLITLPPAREVVRPDLQRTSFPVGDLDEEEWVTVYG 625
                           PV GVV  G+LITLPP  EV RP++QR S P G+L+EEEWVTVYG
Sbjct: 136  KSVGEQDEKGRSS--PVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYG 193

Query: 626  FSPGDTNLVLREFEKCGTILKHVPGPRTANWMHILYQSRFDAHKALSKSGMQINGVLIVG 805
            FSPGDTN+VLREFEKCG ILKHVPGPR ANW+HILYQ+R DAHKAL+K+GMQINGVLIVG
Sbjct: 194  FSPGDTNMVLREFEKCGEILKHVPGPRDANWVHILYQNRSDAHKALNKNGMQINGVLIVG 253

Query: 806  VKLLDPIQRQALSEAPNGNQGFMTLPPASSRTTELIPSKLSPRPYHLXXXXXXXXHSAGV 985
            VKLLDP+QRQAL+E    NQGFM LP AS+R +E+   K   RPY+L         + G 
Sbjct: 254  VKLLDPMQRQALNERLK-NQGFMPLPLASARNSEVSTLKAPSRPYYLQNGNSTARQTGGT 312

Query: 986  IASPAKSVVSKIVDLMFGI 1042
            IASP KS+VSKI+DLMFG+
Sbjct: 313  IASPTKSLVSKIMDLMFGV 331


>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
            gi|255639315|gb|ACU19955.1| unknown [Glycine max]
          Length = 331

 Score =  332 bits (851), Expect = 1e-88
 Identities = 181/319 (56%), Positives = 210/319 (65%), Gaps = 25/319 (7%)
 Frame = +2

Query: 161  LFFQDLATPISTHRGKFTSPGQAAAVSALWRENFGGTDPPPPPVFTLEDRVDFSPE--LV 334
            LFFQDLA+P+S  RGKF+SP QAAAVS+LWRENFG +D PPPPVFTLEDR DFSPE  ++
Sbjct: 16   LFFQDLASPVSARRGKFSSPSQAAAVSSLWRENFGSSDLPPPPVFTLEDRSDFSPESGIL 75

Query: 335  DYP------------------DFKTPV-----LATPLXXXXXXXXXXGGPNVKXXXXXXX 445
            DY                   +F TPV      +T            G P +        
Sbjct: 76   DYQISPETKSDTRTPIQTSNKEFSTPVKSKSEASTSYALRGVQQNQQGSPGLSWWSPTTA 135

Query: 446  XXXXXXXXXXXXXXXPVNGVVNSGSLITLPPAREVVRPDLQRTSFPVGDLDEEEWVTVYG 625
                           PV GVV  G+LITLPP  EV RP++QR S P G+L+EEEWVTVYG
Sbjct: 136  KSGGEQDERGRSS--PVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYG 193

Query: 626  FSPGDTNLVLREFEKCGTILKHVPGPRTANWMHILYQSRFDAHKALSKSGMQINGVLIVG 805
            FSPGDTN+VLREFEKCG ILKHVPGPR ANWMHILYQ+R DAHKAL+K+GMQINGVLIVG
Sbjct: 194  FSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVG 253

Query: 806  VKLLDPIQRQALSEAPNGNQGFMTLPPASSRTTELIPSKLSPRPYHLXXXXXXXXHSAGV 985
            VKLLDP+QRQAL+E    NQGFM LP  S+R +E+   K   RPY+L         + G 
Sbjct: 254  VKLLDPMQRQALNERLK-NQGFMPLPLPSARNSEVSSLKAPSRPYYLQNGNSTARQTGGT 312

Query: 986  IASPAKSVVSKIVDLMFGI 1042
            IASP KS+VSKI+DLMFG+
Sbjct: 313  IASPTKSLVSKIMDLMFGV 331


>ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|222846990|gb|EEE84537.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  327 bits (837), Expect = 6e-87
 Identities = 181/318 (56%), Positives = 209/318 (65%), Gaps = 24/318 (7%)
 Frame = +2

Query: 161  LFFQDLATPISTHRGKFTSPGQAAAVSALWRENFGGTDPPPPPVFTLEDRVDFSPE--LV 334
            LFFQDLA+P+S  +GKF++P QAAAVSALWR+NFGG+D PPPP +TLEDR + SPE  + 
Sbjct: 13   LFFQDLASPVSAGKGKFSTPAQAAAVSALWRDNFGGSDLPPPPFYTLEDRSEISPESGIP 72

Query: 335  DYP---DFKTPVLATPLXXXXXXXXXX--------------GGPNVKXXXXXXXXXXXXX 463
            DYP   D K+    +P                          G N +             
Sbjct: 73   DYPLSPDIKSHPTTSPFQSSGREFGTPPKTKSEATTSFALISGQNTQQGSPISTWWSPSK 132

Query: 464  XXXXXXXXX----PVNGVVNSGSLITLPPAREVVRPDLQRTSFPVGDLDEEEWVTVYGFS 631
                         PV GVV  G+LITLPP REV RP+  R   P G+LDEEEWVTVYGF+
Sbjct: 133  ARSSEHEDKGKGSPVEGVVQPGALITLPPPREVARPEKHRNCVPAGNLDEEEWVTVYGFA 192

Query: 632  PGDTNLVLREFEKCGTILKHVPGPRTANWMHILYQSRFDAHKALSKSGMQINGVLIVGVK 811
            PGDTNLVLREFEKCG ILKHVPGPR ANWMHILYQSR DA KALSK+GMQINGVLI+GVK
Sbjct: 193  PGDTNLVLREFEKCGVILKHVPGPREANWMHILYQSRADAQKALSKNGMQINGVLIIGVK 252

Query: 812  LLDPIQRQALSEAPNGNQGFMTLPPASS-RTTELIPSKLSPRPYHLXXXXXXXXHSAGVI 988
            L+DP+QRQAL+E  N NQGFMTLPP SS RT +    + SPRP++L         S GVI
Sbjct: 253  LVDPMQRQALNERIN-NQGFMTLPPPSSTRTPDSNALRASPRPHYLQNGSTSARQSGGVI 311

Query: 989  ASPAKSVVSKIVDLMFGI 1042
            ASPAKS+VSKI D+MFGI
Sbjct: 312  ASPAKSMVSKIFDVMFGI 329


>ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communis]
            gi|223544890|gb|EEF46405.1| Nucleoporin NUP53, putative
            [Ricinus communis]
          Length = 332

 Score =  323 bits (829), Expect = 5e-86
 Identities = 182/320 (56%), Positives = 207/320 (64%), Gaps = 26/320 (8%)
 Frame = +2

Query: 161  LFFQDLATPISTHRGKFTSPGQAAAVSALWRENFGGTDPPPPPVFTLEDRVDF------- 319
            LF+QDLA+P+S  +GKF +PGQAAAVSALWRENFGG+D PPPP++TLEDR DF       
Sbjct: 17   LFYQDLASPVSARKGKFATPGQAAAVSALWRENFGGSDLPPPPMYTLEDRSDFSPESGIP 76

Query: 320  ----SPELVDYP---------DFKTPV-----LATPLXXXXXXXXXXGGPNVKXXXXXXX 445
                SPE+   P         +F  P       +T            G  +         
Sbjct: 77   DYPVSPEVKSDPRSPRQISGREFMIPSKSKSDASTSFALMNGHQNQQGSAS---STWWSP 133

Query: 446  XXXXXXXXXXXXXXXPVNGVVNSGSLITLPPAREVVRPDLQRTSFPVGDLDEEEWVTVYG 625
                           PV GVV  G+LI LPP REV RP++QR + P G  DEEEWVTVYG
Sbjct: 134  AKASSSEQEDKGKGSPVEGVVQPGALIILPPLREVARPEMQRNNLPTGKFDEEEWVTVYG 193

Query: 626  FSPGDTNLVLREFEKCGTILKHVPGPRTANWMHILYQSRFDAHKALSKSGMQINGVLIVG 805
            FSPGDTNLVLREFEKCG ILKHVPGPR ANWMHILYQSR DA KALSK+GMQINGVLIVG
Sbjct: 194  FSPGDTNLVLREFEKCGVILKHVPGPRDANWMHILYQSRSDAQKALSKNGMQINGVLIVG 253

Query: 806  VKLLDPIQRQALSEAPNGNQGFMTL-PPASSRTTELIPSKLSPRPYHLXXXXXXXXHSAG 982
            VK +DP+QRQAL+E  N NQGFMTL PP+SSR++EL     S RPYH+         S G
Sbjct: 254  VKPVDPMQRQALNERLN-NQGFMTLPPPSSSRSSELKTLGASSRPYHIQNGSSSARQSGG 312

Query: 983  VIASPAKSVVSKIVDLMFGI 1042
             IASPAKSVVSKI D+MFGI
Sbjct: 313  SIASPAKSVVSKIFDVMFGI 332