BLASTX nr result

ID: Coptis21_contig00003677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003677
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524081.1| conserved hypothetical protein [Ricinus comm...   140   2e-31
ref|XP_003590299.1| hypothetical protein MTR_1g056180 [Medicago ...   130   2e-28
ref|XP_002322772.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27
ref|XP_002309261.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27
ref|XP_003632563.1| PREDICTED: uncharacterized protein LOC100254...   126   6e-27

>ref|XP_002524081.1| conserved hypothetical protein [Ricinus communis]
            gi|223536649|gb|EEF38291.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 773

 Score =  140 bits (354), Expect = 2e-31
 Identities = 78/141 (55%), Positives = 91/141 (64%)
 Frame = +1

Query: 1    EGCDQAYILKFDWETTICTLPSETQLLEGKTAADQKTVAVAEGRNGQVQQTNNPKETPVT 180
            EGC+QAYILKFD  T I  LP+  +L + KT  DQ+ VAVA     +  + N  +E  V+
Sbjct: 617  EGCNQAYILKFDSNTIIRKLPNVARLSDEKTTNDQQIVAVAV--EPKKLEVNLKEEASVS 674

Query: 181  MQPVAKPXXXXXXXXXXXVVCRGKESCKEYIKKILAAIPIRELQVDIKKGLMNSTPLHHR 360
               V KP            VCRGK+SCKEYIK  LAAIPIRELQ DIKKGLM STPLH R
Sbjct: 675  GPAVIKPEEPMKGEDEGEEVCRGKDSCKEYIKSFLAAIPIRELQADIKKGLMASTPLHQR 734

Query: 361  LQIKFHYTEFLQPTPEPQAVE 423
            LQI+FHYT+ LQ  PE +A E
Sbjct: 735  LQIEFHYTQLLQALPETRAAE 755


>ref|XP_003590299.1| hypothetical protein MTR_1g056180 [Medicago truncatula]
            gi|355479347|gb|AES60550.1| hypothetical protein
            MTR_1g056180 [Medicago truncatula]
          Length = 753

 Score =  130 bits (328), Expect = 2e-28
 Identities = 78/152 (51%), Positives = 98/152 (64%), Gaps = 3/152 (1%)
 Frame = +1

Query: 1    EGCDQAYILKFDWETTICTLPSETQLLEGKTAADQKTVA-VAEGRNGQVQQTNNPK-ETP 174
            EGC+QAYILKFD  T I  +P+ TQ     T  +Q+TVA V E  + QVQQ N+ + E+ 
Sbjct: 605  EGCNQAYILKFDSNTVIYKMPNVTQSSVENTTGEQQTVADVLEHNDRQVQQINDKELESG 664

Query: 175  VTMQPVAKPXXXXXXXXXXXVVCRGKESCKEYIKKILAAIPIRELQVDIKKGLMNSTPLH 354
                  +K            V+C+GKE+CKEYIK  LAAIPIRELQ D+KKGL++STPLH
Sbjct: 665  AEAGDQSKSEREEDE-----VLCKGKEACKEYIKSFLAAIPIRELQADVKKGLISSTPLH 719

Query: 355  HRLQIKFHYTEFLQPTP-EPQAVEAAGAMLAV 447
            HRLQI+FHYT+ LQ     P A EA+ A+  V
Sbjct: 720  HRLQIEFHYTQLLQSCDVVPVAEEASVAVTEV 751


>ref|XP_002322772.1| predicted protein [Populus trichocarpa] gi|222867402|gb|EEF04533.1|
            predicted protein [Populus trichocarpa]
          Length = 794

 Score =  127 bits (318), Expect = 3e-27
 Identities = 76/158 (48%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
 Frame = +1

Query: 1    EGCDQAYILKFDWETTICTLPSETQLLEGKTAADQKTV-AVAEGRNG-QVQQTNNPKETP 174
            EGC+QAYILKFD  T I  LP+  +  + KT  DQ+ V AV+E ++  QV        TP
Sbjct: 630  EGCNQAYILKFDSNTIIHKLPNAVESSDEKTMGDQQNVPAVSEPKDQHQVNLKEEAASTP 689

Query: 175  VTM-----QPVAKPXXXXXXXXXXXVVCRGKESCKEYIKKILAAIPIRELQVDIKKGLMN 339
              +     +P+              V+C+GK+SCK YIK  LAAIPIRELQ DIKKGLM 
Sbjct: 690  GALVTKNEEPITSEEPLKSEEEGE-VMCQGKDSCKAYIKSFLAAIPIRELQADIKKGLMT 748

Query: 340  STPLHHRLQIKFHYTEFLQPTPEPQAVEAAGAMLAVVP 453
            S PLHHRLQI+FHYT++ QP  E  A E    ML  +P
Sbjct: 749  SKPLHHRLQIEFHYTQYWQPLTETHATE----MLIALP 782


>ref|XP_002309261.1| predicted protein [Populus trichocarpa] gi|222855237|gb|EEE92784.1|
            predicted protein [Populus trichocarpa]
          Length = 781

 Score =  127 bits (318), Expect = 3e-27
 Identities = 75/150 (50%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
 Frame = +1

Query: 1    EGCDQAYILKFDWETTICTLPSETQLLEGKTAADQKTV-AVAEGRNGQVQQTNNPKETPV 177
            EGC+QAYILKFD  T I  L +  +  + KT  DQ+ V A  E ++   QQ  N KE   
Sbjct: 622  EGCNQAYILKFDSNTIINKLQNAAESSDEKTMGDQQNVPATVEPKD---QQQVNLKEEEA 678

Query: 178  TM--------QPVAKPXXXXXXXXXXXVVCRGKESCKEYIKKILAAIPIRELQVDIKKGL 333
            ++        +  +K            VVC+GK+SCKEYIK  LAAIPIRELQ DIKKGL
Sbjct: 679  SILGAIITNPEEPSKSEEPLKSEEEGEVVCQGKDSCKEYIKSFLAAIPIRELQADIKKGL 738

Query: 334  MNSTPLHHRLQIKFHYTEFLQPTPEPQAVE 423
            M S PLHHRLQI+FHYT+ LQP  E  A E
Sbjct: 739  MASKPLHHRLQIEFHYTQHLQPLTETHATE 768


>ref|XP_003632563.1| PREDICTED: uncharacterized protein LOC100254761 isoform 3 [Vitis
            vinifera]
          Length = 750

 Score =  126 bits (316), Expect = 6e-27
 Identities = 76/155 (49%), Positives = 89/155 (57%), Gaps = 4/155 (2%)
 Frame = +1

Query: 1    EGCDQAYILKFDWETTICTLPSETQLLEGKTAADQKTVAVAEGRNGQVQQTNNPKETPVT 180
            EGCDQAYILKF  +T +  L S  Q       +D+K V              NP+E+ V 
Sbjct: 603  EGCDQAYILKFGRDTKLYKLSSVPQ------PSDEKPV--------------NPQESSVA 642

Query: 181  MQPVAKPXXXXXXXXXXXVVCRGKESCKEYIKKILAAIPIRELQVDIKKGLMNSTPLHHR 360
               V KP           VVC+GKESCKEYIK  LAAIPIRELQ DIKKGLM STPLH R
Sbjct: 643  GPVVTKPEESTADEEEAEVVCQGKESCKEYIKNFLAAIPIRELQADIKKGLMASTPLHRR 702

Query: 361  LQIKFHYTEFLQP----TPEPQAVEAAGAMLAVVP 453
            LQI+FHYT+ LQP    T + Q ++ A  +  V P
Sbjct: 703  LQIEFHYTQLLQPAQPETEDNQLLQPAQLVTEVTP 737


Top