BLASTX nr result

ID: Coptis21_contig00003675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003675
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270042.1| PREDICTED: LRR receptor-like serine/threonin...   108   5e-22
ref|XP_003634086.1| PREDICTED: LRR receptor-like serine/threonin...   105   3e-21
emb|CBI22742.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002268274.1| PREDICTED: receptor-like protein kinase 5-li...   104   7e-21
ref|XP_002268448.2| PREDICTED: receptor-like protein 12-like [Vi...   103   1e-20

>ref|XP_002270042.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO1-like [Vitis vinifera]
          Length = 1024

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/104 (50%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
 Frame = +1

Query: 1    NLSGPIPMGSQLQTFENSSYIGNSELCGFPLQRKCFHDE-QPHAPSHN-DRKGQPEGDHL 174
            NLSG IP G+QLQ+F   SY GN  LCG PL +KCF D+ +  +P+HN + K Q +G+ +
Sbjct: 906  NLSGKIPQGTQLQSFNIDSYKGNPALCGLPLLKKCFEDKIKQDSPTHNIEDKIQQDGNDM 965

Query: 175  KINWFYIGIVSGFAVGNWGVCAVLLFKKTWRCAYFRFCDDIYDW 306
               WFY+ +  GF VG WGVC  LL   +WR AYF+F + I DW
Sbjct: 966  ---WFYVSVALGFIVGFWGVCGTLLLNNSWRYAYFQFLNKIKDW 1006


>ref|XP_003634086.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            FLS2-like [Vitis vinifera]
          Length = 1436

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/99 (48%), Positives = 64/99 (64%)
 Frame = +1

Query: 7    SGPIPMGSQLQTFENSSYIGNSELCGFPLQRKCFHDEQPHAPSHNDRKGQPEGDHLKINW 186
            SG IP  +QLQ+ +   + GN+ELCG PL + C  DE+P   + N+  G+    H +I W
Sbjct: 764  SGKIPSSTQLQSLDPLYFFGNAELCGAPLSKNCTKDEEPQDTNTNEESGE----HPEIAW 819

Query: 187  FYIGIVSGFAVGNWGVCAVLLFKKTWRCAYFRFCDDIYD 303
            FYIG+ +GF VG WGVC  L FK++WR AYFR  DD+ D
Sbjct: 820  FYIGMGTGFVVGFWGVCGALFFKRSWRHAYFRVLDDMKD 858



 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/101 (47%), Positives = 62/101 (61%)
 Frame = +1

Query: 1    NLSGPIPMGSQLQTFENSSYIGNSELCGFPLQRKCFHDEQPHAPSHNDRKGQPEGDHLKI 180
            N SG IP  +QLQ+F+   +IGN ELCG PL + C  +E P+    N       GD  + 
Sbjct: 1319 NFSGRIPSSTQLQSFDALDFIGNPELCGAPLLKNCTENENPNPSDEN-------GDGFER 1371

Query: 181  NWFYIGIVSGFAVGNWGVCAVLLFKKTWRCAYFRFCDDIYD 303
            +WFYIG+ +GF V  WGVC  LL K+ WR AYF+F D+I D
Sbjct: 1372 SWFYIGMGTGFIVSFWGVCGALLCKRAWRHAYFKFLDNIKD 1412


>emb|CBI22742.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/99 (48%), Positives = 64/99 (64%)
 Frame = +1

Query: 7   SGPIPMGSQLQTFENSSYIGNSELCGFPLQRKCFHDEQPHAPSHNDRKGQPEGDHLKINW 186
           SG IP  +QLQ+ +   + GN+ELCG PL + C  DE+P   + N+  G+    H +I W
Sbjct: 502 SGKIPSSTQLQSLDPLYFFGNAELCGAPLSKNCTKDEEPQDTNTNEESGE----HPEIAW 557

Query: 187 FYIGIVSGFAVGNWGVCAVLLFKKTWRCAYFRFCDDIYD 303
           FYIG+ +GF VG WGVC  L FK++WR AYFR  DD+ D
Sbjct: 558 FYIGMGTGFVVGFWGVCGALFFKRSWRHAYFRVLDDMKD 596


>ref|XP_002268274.1| PREDICTED: receptor-like protein kinase 5-like [Vitis vinifera]
          Length = 870

 Score =  104 bits (260), Expect = 7e-21
 Identities = 49/101 (48%), Positives = 66/101 (65%)
 Frame = +1

Query: 1    NLSGPIPMGSQLQTFENSSYIGNSELCGFPLQRKCFHDEQPHAPSHNDRKGQPEGDHLKI 180
            N SG IP  +QLQ+ +  S+ GN+ELCG PL + C  DE+P   ++ D + +   +H +I
Sbjct: 739  NFSGRIPSSTQLQSLDPLSFFGNAELCGAPLTKNCTKDEEPQ-DTNTDEESR---EHPEI 794

Query: 181  NWFYIGIVSGFAVGNWGVCAVLLFKKTWRCAYFRFCDDIYD 303
             WFYIG+ +GF VG WGVC  L FK+ WR AYFR  DD+ D
Sbjct: 795  AWFYIGMGTGFVVGFWGVCGALFFKRAWRHAYFRVLDDMKD 835


>ref|XP_002268448.2| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 1022

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/102 (51%), Positives = 62/102 (60%)
 Frame = +1

Query: 1    NLSGPIPMGSQLQTFENSSYIGNSELCGFPLQRKCFHDEQPHAPSHNDRKGQPEGDHLKI 180
            N SG IP  +QLQ+F+  SYIGN+ELCG PL + C  DE        D     EG   +I
Sbjct: 748  NFSGRIPSSTQLQSFDEISYIGNAELCGVPLTKNCTEDEDFQGIDVIDEN--EEGS--EI 803

Query: 181  NWFYIGIVSGFAVGNWGVCAVLLFKKTWRCAYFRFCDDIYDW 306
             WFYIG+  GF VG WGVC  LLFKK WR AYF+F   + DW
Sbjct: 804  PWFYIGMGLGFIVGFWGVCGALLFKKAWRHAYFQFLYRVKDW 845


Top