BLASTX nr result

ID: Coptis21_contig00003670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003670
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282260.1| PREDICTED: uncharacterized protein LOC100266...    62   6e-08
ref|XP_003614537.1| hypothetical protein MTR_5g055200 [Medicago ...    58   9e-07
ref|XP_003544089.1| PREDICTED: uncharacterized protein LOC100801...    57   2e-06
ref|XP_002312390.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_002529124.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002282260.1| PREDICTED: uncharacterized protein LOC100266408 [Vitis vinifera]
           gi|147856928|emb|CAN78631.1| hypothetical protein
           VITISV_000032 [Vitis vinifera]
           gi|297737835|emb|CBI27036.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/50 (52%), Positives = 40/50 (80%)
 Frame = -1

Query: 274 SLASIESLSMPQVHEIVLSADLRCVECQKKVAAVISRTTGKLLLTEIRLL 125
           +LAS+ESL+MP + E+V+SAD +CVECQK++AA+ISR   ++   E+ +L
Sbjct: 28  TLASVESLTMPLIQEVVISADFQCVECQKRIAAIISRMNAEMESVEVNVL 77


>ref|XP_003614537.1| hypothetical protein MTR_5g055200 [Medicago truncatula]
           gi|355515872|gb|AES97495.1| hypothetical protein
           MTR_5g055200 [Medicago truncatula]
          Length = 121

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/50 (54%), Positives = 39/50 (78%)
 Frame = -1

Query: 274 SLASIESLSMPQVHEIVLSADLRCVECQKKVAAVISRTTGKLLLTEIRLL 125
           SLASIESLSMP+VHE+VLSAD++C +CQK+V  +I++   +    E+ +L
Sbjct: 28  SLASIESLSMPKVHEVVLSADMQCEKCQKRVIDIITKMNVETESMEVNVL 77


>ref|XP_003544089.1| PREDICTED: uncharacterized protein LOC100801031 [Glycine max]
          Length = 68

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = -1

Query: 286 PATRS-LASIESLSMPQVHEIVLSADLRCVECQKKVAAVISRTTGK 152
           P TR+ LAS+ESLS+P V EIVLSAD++C +CQK+VA +I++  GK
Sbjct: 23  PLTRTTLASMESLSLPVVQEIVLSADMQCEKCQKRVADIITKMNGK 68


>ref|XP_002312390.1| predicted protein [Populus trichocarpa] gi|222852210|gb|EEE89757.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/37 (64%), Positives = 33/37 (89%)
 Frame = -1

Query: 271 LASIESLSMPQVHEIVLSADLRCVECQKKVAAVISRT 161
           LAS+ESL++P V EIVLSAD+RC ECQ+++A ++SRT
Sbjct: 8   LASVESLTLPLVQEIVLSADIRCAECQRRLADIMSRT 44


>ref|XP_002529124.1| conserved hypothetical protein [Ricinus communis]
           gi|223531403|gb|EEF33237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = -1

Query: 274 SLASIESLSMPQVHEIVLSADLRCVECQKKVAAVISR 164
           SLAS+ESLS+P V E+VLSAD+RC ECQK+VA  +S+
Sbjct: 28  SLASVESLSLPLVQEVVLSADIRCSECQKRVAEFMSK 64


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