BLASTX nr result

ID: Coptis21_contig00003657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003657
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245...   236   5e-60
ref|XP_002299754.1| predicted protein [Populus trichocarpa] gi|1...   216   7e-54
ref|XP_002285114.1| PREDICTED: uncharacterized protein LOC100254...   212   1e-52
ref|NP_197918.1| uncharacterized protein [Arabidopsis thaliana] ...   208   2e-51
gb|ACG43637.1| hypothetical protein [Zea mays]                        207   2e-51

>ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245670 [Vitis vinifera]
           gi|297738963|emb|CBI28208.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  236 bits (603), Expect = 5e-60
 Identities = 110/160 (68%), Positives = 132/160 (82%), Gaps = 1/160 (0%)
 Frame = -1

Query: 892 MHGCRGCLGCFTNPRPIISVDEPSKGLKVRGQTVRKPTISEDFWSTSTCEMDNSAVPSQX 713
           MHG RGCLGC T P PII+VDEPSKGL+++G+TV+KP+ISEDFWSTSTCE+DNS V SQ 
Sbjct: 1   MHGSRGCLGCCTKPTPIIAVDEPSKGLRIQGRTVKKPSISEDFWSTSTCEIDNSTVQSQR 60

Query: 712 XXXXXXXXXRTDPH-SGSSSTSNPPEFVNHGLLLWNQTRQQWLGNRRTQSKTQQDREPKL 536
                    ++  H SG  STSN  EF+NHGLLLWNQTR QW+GN+R+++++QQ REP+L
Sbjct: 61  SISSISTSNQSLTHYSGIGSTSNNSEFINHGLLLWNQTRLQWVGNKRSENQSQQIREPRL 120

Query: 535 SWNATYESLLGTNKPFSQPIPLSEMVDFLVDVWEQDGMYD 416
            WNATYE LLGTN+ FSQPIPLSEM+DFLVDVWEQ+GMYD
Sbjct: 121 RWNATYEGLLGTNRRFSQPIPLSEMIDFLVDVWEQEGMYD 160


>ref|XP_002299754.1| predicted protein [Populus trichocarpa] gi|118485078|gb|ABK94402.1|
           unknown [Populus trichocarpa]
           gi|222847012|gb|EEE84559.1| predicted protein [Populus
           trichocarpa]
          Length = 160

 Score =  216 bits (550), Expect = 7e-54
 Identities = 103/160 (64%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
 Frame = -1

Query: 892 MHGCRGCLGCFTNPRPIISVDEPSKGLKVRGQTVRKPTISEDFWSTSTCEMDNSAVPSQX 713
           MHG  GCLGC+  P  I SV E SKG KV+ +TV+KP+ISEDFW+TSTC+MD SAV SQ 
Sbjct: 1   MHGSSGCLGCYNKPTLITSVGEQSKGPKVKCETVKKPSISEDFWTTSTCDMDYSAVQSQG 60

Query: 712 XXXXXXXXXRT-DPHSGSSSTSNPPEFVNHGLLLWNQTRQQWLGNRRTQSKTQQDREPKL 536
                    +T D H GS S +N  EFVNHGLLLWNQTR  W+GN+R+ ++ Q  +EPKL
Sbjct: 61  SISSISIANQTLDQHGGSGSINNVSEFVNHGLLLWNQTRHCWVGNKRSGNEEQLPQEPKL 120

Query: 535 SWNATYESLLGTNKPFSQPIPLSEMVDFLVDVWEQDGMYD 416
           +WNATYESLLG+NKPF QPIPL+EMVDFLVD+WEQ+GMYD
Sbjct: 121 NWNATYESLLGSNKPFPQPIPLTEMVDFLVDIWEQEGMYD 160


>ref|XP_002285114.1| PREDICTED: uncharacterized protein LOC100254371 isoform 1 [Vitis
           vinifera]
          Length = 173

 Score =  212 bits (540), Expect = 1e-52
 Identities = 102/155 (65%), Positives = 122/155 (78%), Gaps = 1/155 (0%)
 Frame = -1

Query: 877 GCLGCFTNPRPIISVDEPSKGLKVRGQTVRKPTISEDFWSTSTCEMDNSAVPSQXXXXXX 698
           GCLGC + P  II V E  KGL ++G+T  +P+  EDFWSTST EMDNSAV SQ      
Sbjct: 20  GCLGCCSKPTEIIGVYESPKGLTIQGRTAMRPSPVEDFWSTSTGEMDNSAVQSQGSISSI 79

Query: 697 XXXXRT-DPHSGSSSTSNPPEFVNHGLLLWNQTRQQWLGNRRTQSKTQQDREPKLSWNAT 521
               +T DPHS + STSNPPEFVNHGLLLWNQTRQQW+GN+++Q++ +Q +EP++SWNAT
Sbjct: 80  STSNQTFDPHSNAGSTSNPPEFVNHGLLLWNQTRQQWIGNQKSQNR-KQVQEPRISWNAT 138

Query: 520 YESLLGTNKPFSQPIPLSEMVDFLVDVWEQDGMYD 416
           YESLLGTNKP  QPIPL EMVDFLVDVWEQ+G+YD
Sbjct: 139 YESLLGTNKPLPQPIPLPEMVDFLVDVWEQEGLYD 173


>ref|NP_197918.1| uncharacterized protein [Arabidopsis thaliana]
           gi|334187932|ref|NP_001190393.1| uncharacterized protein
           [Arabidopsis thaliana] gi|28973729|gb|AAO64181.1|
           unknown protein [Arabidopsis thaliana]
           gi|29824197|gb|AAP04059.1| unknown protein [Arabidopsis
           thaliana] gi|110736786|dbj|BAF00354.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332006047|gb|AED93430.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332006048|gb|AED93431.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 169

 Score =  208 bits (529), Expect = 2e-51
 Identities = 103/163 (63%), Positives = 122/163 (74%), Gaps = 1/163 (0%)
 Frame = -1

Query: 901 IF*MHGCRG-CLGCFTNPRPIISVDEPSKGLKVRGQTVRKPTISEDFWSTSTCEMDNSAV 725
           I+ + GC G C GC   P  I++VDEPSKGL+++G+ V+KP++SEDFWSTSTCEMDNS +
Sbjct: 11  IYQLFGCMGGCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTL 70

Query: 724 PSQXXXXXXXXXXRTDPHSGSSSTSNPPEFVNHGLLLWNQTRQQWLGNRRTQSKTQQDRE 545
            SQ           T   S S+STSNP EFVNHGL LWNQTRQQWL N  +Q K +  RE
Sbjct: 71  QSQRSMSSISFTNNT---STSASTSNPTEFVNHGLNLWNQTRQQWLANGTSQKKAKV-RE 126

Query: 544 PKLSWNATYESLLGTNKPFSQPIPLSEMVDFLVDVWEQDGMYD 416
           P +SWNATYESLLG NK FS+PIPL EMVDFLVDVWEQ+G+YD
Sbjct: 127 PTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169


>gb|ACG43637.1| hypothetical protein [Zea mays]
          Length = 174

 Score =  207 bits (528), Expect = 2e-51
 Identities = 94/154 (61%), Positives = 117/154 (75%)
 Frame = -1

Query: 877 GCLGCFTNPRPIISVDEPSKGLKVRGQTVRKPTISEDFWSTSTCEMDNSAVPSQXXXXXX 698
           GC GC   P PII+VDEPSK L+++G++VRK ++SEDFWSTS  EM+NS + SQ      
Sbjct: 21  GCFGCCAKPTPIIAVDEPSKRLRIQGRSVRKASLSEDFWSTSAHEMENSGIQSQRSMSSI 80

Query: 697 XXXXRTDPHSGSSSTSNPPEFVNHGLLLWNQTRQQWLGNRRTQSKTQQDREPKLSWNATY 518
               ++     S S SNP EF+N GL+LWNQTRQQW+G+++  S++QQ REPKLSWN TY
Sbjct: 81  STLAQSSDQHASGSCSNPNEFMNQGLMLWNQTRQQWVGSKKRHSRSQQPREPKLSWNTTY 140

Query: 517 ESLLGTNKPFSQPIPLSEMVDFLVDVWEQDGMYD 416
           ESLLG+NKPFSQPIPL EMVD LVD WEQ+G+YD
Sbjct: 141 ESLLGSNKPFSQPIPLGEMVDLLVDAWEQEGLYD 174


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