BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003651
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycin...    72   6e-11
ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    70   2e-10
ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycin...    60   2e-07
ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    57   1e-06

>ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
           gi|255644669|gb|ACU22837.1| unknown [Glycine max]
          Length = 411

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/81 (54%), Positives = 54/81 (66%)
 Frame = -2

Query: 245 MVLSNKKLKQKLRATLTETLAAKESKVDPVSKSSHSDNNKSFKELLGSATQKPRVSKREK 66
           MVLSNKKLK KLRA L +  +   +  +P S SS ++NN S K LL SAT K R SKREK
Sbjct: 1   MVLSNKKLKLKLRAELAQRNS--NAAAEPPSSSSSTNNNNSLKTLLDSATPKARFSKREK 58

Query: 65  RRKIQSLQPSNGDAHVEVLNE 3
           RRK++S QPS   A+ E+  E
Sbjct: 59  RRKLRSDQPSQ-QANKEIQTE 78


>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|296086279|emb|CBI31720.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/73 (58%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
 Frame = -2

Query: 245 MVLSNKKLKQKLRATLTETLAAKES-KVDPVSKSSHSDNN----KSFKELLGSATQKPRV 81
           MVLSNKKLKQKLRA L E+L    +   DP +  S S N     +S + LLGSATQ PR+
Sbjct: 1   MVLSNKKLKQKLRAALAESLVVSVAGTTDPTTTDSTSTNPDPNPQSLENLLGSATQIPRL 60

Query: 80  SKREKRRKIQSLQ 42
           SKREKRRK  SLQ
Sbjct: 61  SKREKRRKTLSLQ 73


>ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|222865346|gb|EEF02477.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
 Frame = -2

Query: 245 MVLSNKKLKQKLRATLTETLAAKESKVDPVSKSSHS----DNNKSFKELLGSATQKPRVS 78
           MVLSNKKLKQKLRA   E L +K S        + S    ++N   +ELL +A Q+ R+S
Sbjct: 1   MVLSNKKLKQKLRAVKAEALVSKVSNGPERDSKNGSLGNPESNSQLQELLEAAKQRQRLS 60

Query: 77  KREKRRKIQSLQ 42
           KRE+RRK QSLQ
Sbjct: 61  KREQRRKTQSLQ 72


>ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
          Length = 394

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/69 (55%), Positives = 46/69 (66%)
 Frame = -2

Query: 245 MVLSNKKLKQKLRATLTETLAAKESKVDPVSKSSHSDNNKSFKELLGSATQKPRVSKREK 66
           MVLSNKKLK KLRA L ++ +   +  +P S S +  NN S K LL SAT  PR  KREK
Sbjct: 1   MVLSNKKLKLKLRAELAQSNS--NAAAEPPSFSIN--NNNSLKTLLDSATPTPRFFKREK 56

Query: 65  RRKIQSLQP 39
           RRK++S QP
Sbjct: 57  RRKLRSDQP 65


>ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 432

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
 Frame = -2

Query: 245 MVLSNKKLKQKLRATLTETL----AAKESKVDPVSKSSHSDNNKSFKELLGSAT-QKPRV 81
           MVLSNKKLKQKLR  L E+L    A +++      +       KS KELLG+A+   PR+
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60

Query: 80  SKREKRRKIQSLQPSNGD 27
           SKREKRR+   L  S+G+
Sbjct: 61  SKREKRRESLVLTGSDGN 78