BLASTX nr result

ID: Coptis21_contig00003645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003645
         (1400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110
ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier f...   404   e-110
ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative...   403   e-110
ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|2...   403   e-110
emb|CAN77030.1| hypothetical protein VITISV_015341 [Vitis vinifera]   403   e-110

>ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|222838276|gb|EEE76641.1|
            predicted protein [Populus trichocarpa]
          Length = 317

 Score =  404 bits (1039), Expect = e-110
 Identities = 208/320 (65%), Positives = 248/320 (77%)
 Frame = +3

Query: 168  MAIDFESLTEATSGAVGSLLSTTILYPLDTCKTKYQAEVRSHGRQRYKKLSDVLWEAISS 347
            M +D ES++EATSGA+GSLLSTTILYPLDTCKTKYQAE R+HG+Q+Y+KL+DVLWEAIS+
Sbjct: 1    MGVDLESVSEATSGAIGSLLSTTILYPLDTCKTKYQAEARAHGQQKYRKLTDVLWEAIST 60

Query: 348  RQVLSLYQGLGTKNLQXXXXXXXXXXXXXXXKRMHVEWNGNKNIGTKANLIIXXXXXXCT 527
            RQVLSLYQG+GTKNLQ               KR+++E +G K IGTKANLII      CT
Sbjct: 61   RQVLSLYQGIGTKNLQSFISQFVYFYGYSYFKRLYMEKSGFKKIGTKANLIIAAAAGACT 120

Query: 528  VIVTHPLDTVSSRMQTSAFGKSKGLLQSFKESTWSEAYDGLGISLLLTSNPSIQYTAFDQ 707
             ++T PLDT SSRMQTSAFGKSKGL ++  E +WS+A+DGLGISLLLTSNP+IQYT FDQ
Sbjct: 121  AVITQPLDTASSRMQTSAFGKSKGLWETLTEGSWSDAFDGLGISLLLTSNPAIQYTVFDQ 180

Query: 708  XXXXXXXXXXXXXIGAESSPEELSAFSAFVLGAVSKSIATCLTYPAIRCKVTIQSADPDD 887
                          GAE +   LSAFSAFVLGA+SKSIAT LTYPAIRCKV I++AD DD
Sbjct: 181  LKQKLLMRNKN---GAEKTAVTLSAFSAFVLGALSKSIATFLTYPAIRCKVVIEAADTDD 237

Query: 888  GETQEAPPKLPKTIMGAIYTIWRREGLLGFYKGLQAQILKTVLSSALLLMIKEKITRSTW 1067
             ET+++  K  KTI   I  IW+REG+ GF+KGL AQILKTVLSSALLLMIKEKI  +TW
Sbjct: 238  DETKKSQRKSKKTISAVICAIWKREGIFGFFKGLHAQILKTVLSSALLLMIKEKIAATTW 297

Query: 1068 VMMLAIRRYILVTRSRLRSS 1127
            V++LAIRRY+ +TR RL+S+
Sbjct: 298  VLILAIRRYLFLTRGRLKST 317


>ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier family protein Q [Vitis
            vinifera] gi|297737006|emb|CBI26207.3| unnamed protein
            product [Vitis vinifera]
          Length = 319

 Score =  404 bits (1038), Expect = e-110
 Identities = 210/321 (65%), Positives = 249/321 (77%), Gaps = 1/321 (0%)
 Frame = +3

Query: 168  MAIDFESLTEATSGAVGSLLSTTILYPLDTCKTKYQAEVRSHGRQRYKKLSDVLWEAISS 347
            M  D ESL EATSGAVG+L+STTILYPLDTCKTKYQAEV  H +Q+Y+ +SDVLWEAIS+
Sbjct: 1    MGFDTESLLEATSGAVGALVSTTILYPLDTCKTKYQAEVSGHHQQKYRNISDVLWEAIST 60

Query: 348  RQVLSLYQGLGTKNLQXXXXXXXXXXXXXXXKRMHVEWNGNKNIGTKANLIIXXXXXXCT 527
             QVLSLYQGLGTKNLQ               KR+++E +G K I TKANLI+      CT
Sbjct: 61   NQVLSLYQGLGTKNLQSFISQFVYFYGYSFFKRLYLEKSGAKTIRTKANLIVAAAAGACT 120

Query: 528  VIVTHPLDTVSSRMQTSAFGKSKGLLQSFKESTWSEAYDGLGISLLLTSNPSIQYTAFDQ 707
            V++T PLDT SSRMQTSAFGKSKGL ++  E TW EA+DGLGISLLLT+NPSIQYT FDQ
Sbjct: 121  VLMTQPLDTASSRMQTSAFGKSKGLWKTLSEGTWKEAFDGLGISLLLTANPSIQYTVFDQ 180

Query: 708  XXXXXXXXXXXXXIGAESSPEELSAFSAFVLGAVSKSIATCLTYPAIRCKVTIQSADPD- 884
                          G ESSPE LSAFSAFVLGAVSK IAT +TYPAIRCKV +Q+A+ D 
Sbjct: 181  LKLRLLKGKLSNKTGTESSPEALSAFSAFVLGAVSKCIATTVTYPAIRCKVMLQAAESDE 240

Query: 885  DGETQEAPPKLPKTIMGAIYTIWRREGLLGFYKGLQAQILKTVLSSALLLMIKEKITRST 1064
            DG T+EA P+  KT+   IY+IW+REGLLGF+KGL+AQILKTVLSSALLLMIKEKIT++T
Sbjct: 241  DGTTKEAQPR--KTVSDTIYSIWKREGLLGFFKGLEAQILKTVLSSALLLMIKEKITKTT 298

Query: 1065 WVMMLAIRRYILVTRSRLRSS 1127
            WV++LA+RRY+ V R+RL+++
Sbjct: 299  WVILLALRRYLTVNRTRLKAA 319


>ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative [Ricinus communis]
            gi|223548333|gb|EEF49824.1| peroxisomal membrane protein
            pmp34, putative [Ricinus communis]
          Length = 318

 Score =  403 bits (1036), Expect = e-110
 Identities = 213/320 (66%), Positives = 251/320 (78%)
 Frame = +3

Query: 168  MAIDFESLTEATSGAVGSLLSTTILYPLDTCKTKYQAEVRSHGRQRYKKLSDVLWEAISS 347
            MA+D ESL+EATSGA+GSLLSTTILYPLDTCKTKYQAEVR+HG+++Y+ LSDVL+EAIS+
Sbjct: 1    MAVDLESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQRKYRHLSDVLFEAISN 60

Query: 348  RQVLSLYQGLGTKNLQXXXXXXXXXXXXXXXKRMHVEWNGNKNIGTKANLIIXXXXXXCT 527
             Q+LSLYQGLGTKNLQ               KR+++E +G K IGTKANL++      CT
Sbjct: 61   GQILSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGFKKIGTKANLVLAAAAGACT 120

Query: 528  VIVTHPLDTVSSRMQTSAFGKSKGLLQSFKESTWSEAYDGLGISLLLTSNPSIQYTAFDQ 707
             IVT PLDT SSRMQTSAFGKSKGL Q+  E  W +A+DGLGISLLLTSNP+IQYT FDQ
Sbjct: 121  AIVTQPLDTASSRMQTSAFGKSKGLWQTLTEGNWGDAFDGLGISLLLTSNPAIQYTVFDQ 180

Query: 708  XXXXXXXXXXXXXIGAESSPEELSAFSAFVLGAVSKSIATCLTYPAIRCKVTIQSADPDD 887
                           + SS E LSAFSAFVLGAVSKSIAT +TYPAIRCKV IQ+AD DD
Sbjct: 181  -LKQRLLKGKQNTADSSSSVEALSAFSAFVLGAVSKSIATVITYPAIRCKVMIQAADSDD 239

Query: 888  GETQEAPPKLPKTIMGAIYTIWRREGLLGFYKGLQAQILKTVLSSALLLMIKEKITRSTW 1067
             E+++   K  KT+ G +  IW+REG+LGF+KGLQAQILKTVLSSALLLMIKEKI+RSTW
Sbjct: 240  -ESKKGKSKSRKTVPGVVCAIWKREGVLGFFKGLQAQILKTVLSSALLLMIKEKISRSTW 298

Query: 1068 VMMLAIRRYILVTRSRLRSS 1127
            V++LAIRRY+LV RSRL+S+
Sbjct: 299  VLILAIRRYLLVPRSRLKSA 318


>ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|222863758|gb|EEF00889.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  403 bits (1036), Expect = e-110
 Identities = 207/320 (64%), Positives = 247/320 (77%)
 Frame = +3

Query: 168  MAIDFESLTEATSGAVGSLLSTTILYPLDTCKTKYQAEVRSHGRQRYKKLSDVLWEAISS 347
            MA D ESL+EATSGA+G+L+STTI YPLDTCKTKYQAEVR+H +Q+Y+ +SDV WEAI+S
Sbjct: 1    MAFDLESLSEATSGAIGALVSTTISYPLDTCKTKYQAEVRAHHQQKYRNISDVFWEAIAS 60

Query: 348  RQVLSLYQGLGTKNLQXXXXXXXXXXXXXXXKRMHVEWNGNKNIGTKANLIIXXXXXXCT 527
            RQVLSLYQGLGTKNLQ               KR+++E + NK IGTKANLI+      CT
Sbjct: 61   RQVLSLYQGLGTKNLQSFISQFVYFYGYSFFKRLYLEKSRNKTIGTKANLIVAAAAGACT 120

Query: 528  VIVTHPLDTVSSRMQTSAFGKSKGLLQSFKESTWSEAYDGLGISLLLTSNPSIQYTAFDQ 707
            VIVT PLDT SS+MQTS FGKS+GL ++  E TWSEA+DGLGISLLLTSNPSIQYT FDQ
Sbjct: 121  VIVTQPLDTASSKMQTSEFGKSRGLWKTLSEGTWSEAFDGLGISLLLTSNPSIQYTVFDQ 180

Query: 708  XXXXXXXXXXXXXIGAESSPEELSAFSAFVLGAVSKSIATCLTYPAIRCKVTIQSADPDD 887
                            ESSPE LSAFSAFVLGAVSK IATC+TYPAIRCKVT+Q+A+ D+
Sbjct: 181  LKRRLLERQLSKKSSIESSPEALSAFSAFVLGAVSKCIATCVTYPAIRCKVTLQAAESDE 240

Query: 888  GETQEAPPKLPKTIMGAIYTIWRREGLLGFYKGLQAQILKTVLSSALLLMIKEKITRSTW 1067
             E +E   K  KTI GA+Y+IW+ EG  GF+KGL AQ LKTVLSSAL LMIKEKI+++TW
Sbjct: 241  SEIEEVQAK-TKTISGALYSIWKNEGSAGFFKGLLAQNLKTVLSSALHLMIKEKISKTTW 299

Query: 1068 VMMLAIRRYILVTRSRLRSS 1127
             +MLA++RY+ VTRSR++S+
Sbjct: 300  FLMLALKRYLFVTRSRIKST 319


>emb|CAN77030.1| hypothetical protein VITISV_015341 [Vitis vinifera]
          Length = 322

 Score =  403 bits (1036), Expect = e-110
 Identities = 209/320 (65%), Positives = 248/320 (77%)
 Frame = +3

Query: 168  MAIDFESLTEATSGAVGSLLSTTILYPLDTCKTKYQAEVRSHGRQRYKKLSDVLWEAISS 347
            MA+D +SL+EATSGAVG+LLSTTILYPLDTCKTKYQAEV++HG+Q+Y+ LSDVLWEAIS+
Sbjct: 1    MAVDLQSLSEATSGAVGALLSTTILYPLDTCKTKYQAEVKAHGQQKYRNLSDVLWEAIST 60

Query: 348  RQVLSLYQGLGTKNLQXXXXXXXXXXXXXXXKRMHVEWNGNKNIGTKANLIIXXXXXXCT 527
            RQ++SLYQGLGTKNLQ               KR+++E +G  +IGTKANLI+      CT
Sbjct: 61   RQIVSLYQGLGTKNLQSFIAQFVYFYGYSCFKRLYLERSGFNSIGTKANLILAAAAGACT 120

Query: 528  VIVTHPLDTVSSRMQTSAFGKSKGLLQSFKESTWSEAYDGLGISLLLTSNPSIQYTAFDQ 707
             IVT PLDT SSRMQTSAFGKSKGL Q+    TWSEA+DGLGISLLLT+NP+IQYT FDQ
Sbjct: 121  AIVTQPLDTASSRMQTSAFGKSKGLWQTLTAGTWSEAFDGLGISLLLTTNPAIQYTVFDQ 180

Query: 708  XXXXXXXXXXXXXIGAESSPEELSAFSAFVLGAVSKSIATCLTYPAIRCKVTIQSADPDD 887
                             SSPE LSA SAF+LGA+SKSIAT LTYPAIRCKV IQ+AD  D
Sbjct: 181  -LKQRHLKRNQNITEKGSSPEALSALSAFMLGAISKSIATFLTYPAIRCKVMIQAADTSD 239

Query: 888  GETQEAPPKLPKTIMGAIYTIWRREGLLGFYKGLQAQILKTVLSSALLLMIKEKITRSTW 1067
             E ++AP K  KT+ G +Y IW+REG+ GF+KGLQAQILKTVLSSALLLMIKEKI   TW
Sbjct: 240  DEAKKAPQKSHKTVHGVLYAIWKREGVPGFFKGLQAQILKTVLSSALLLMIKEKIAAGTW 299

Query: 1068 VMMLAIRRYILVTRSRLRSS 1127
            V++LA R+Y+L+T SRL+S+
Sbjct: 300  VLILAARKYLLLTGSRLKSA 319


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