BLASTX nr result
ID: Coptis21_contig00003643
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00003643
(2982 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266... 699 0.0
emb|CBI34075.3| unnamed protein product [Vitis vinifera] 694 0.0
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 548 e-153
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 527 e-147
gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis] 522 e-145
>ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266805 [Vitis vinifera]
Length = 719
Score = 699 bits (1804), Expect = 0.0
Identities = 354/607 (58%), Positives = 438/607 (72%), Gaps = 6/607 (0%)
Frame = +2
Query: 281 MKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFVRFAT 460
+KERRKRKEFE+FVGGLDRD E+D+ F QVG++TEVRLMKN +TQKNKGF F+RFAT
Sbjct: 116 VKERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFIRFAT 175
Query: 461 VEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAIFREKLVHHGVDKFEE 640
VEQARRA+NELKHP +NGKQCGV+PSQDSDTLFVGNICKTWTK ++KL ++GVDK+E+
Sbjct: 176 VEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVDKYED 235
Query: 641 VTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFIEPDD 820
+TLVED KNEG+NRGFAFLDFS RADALEACKRLQK DVVFGTDR+A+VAFADTFIEPDD
Sbjct: 236 LTLVEDTKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFIEPDD 295
Query: 821 EIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFDTHDA 1000
EIM+QVRT+FLDGLPA+WDEDR +++KKFG++EK+ELARNMPAAKRTDFGF+TFDTHD+
Sbjct: 296 EIMSQVRTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFDTHDS 355
Query: 1001 AVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXTSWDSS 1180
AVACVD +NN+EL DG + VKVRARLSRPRQRGKS++HA W SS
Sbjct: 356 AVACVDSINNSELVDGERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAPWGSS 415
Query: 1181 ----DSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITEMASSRIDSRRRLPSSERSY 1348
DSW + GR GR MQ+ Y GG KRP+G R+R+ + EM +R+ SRRR PS E S+
Sbjct: 416 SSRMDSWKFTGRGGRSMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSPESSF 475
Query: 1349 DRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRSSNYVS 1528
RRSP + +SS++REY++ DE + R + F
Sbjct: 476 GRRSP--VYEKSSTKREYIQRDESFSRPAVF----------------------------- 504
Query: 1529 KTRSSDFVTKGASEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHME 1708
+ +E+R+ Y+D Y SR SEYLDSP ++ Y R++E
Sbjct: 505 --------ARDPTERRY-YKDNYSSRGSEYLDSP-PRNVSRAAGHRAPLYEDDDYDRYLE 554
Query: 1709 RPSSYRGSQSHDYGSVSGSKRPHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYNDRA 1888
RP++Y HDYGS+S SKR H++MEE SR+ E +R SRARFDYG SN +PY+D
Sbjct: 555 RPTNYHDGHRHDYGSISSSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPYDDH- 613
Query: 1889 YGSESTS-ARVGRGTHLGYERGSRSSAGHSQGVYDTHTS-SAYSRDEGRRADMGGAYSSY 2062
YGSESTS R+GRG+ LGY+ G RSS+GHS+G+Y+T TS + Y RD+ R + G YSSY
Sbjct: 614 YGSESTSERRMGRGSRLGYDGGMRSSSGHSRGMYETRTSTTGYRRDDISRGNEEGMYSSY 673
Query: 2063 ERDYPSR 2083
+R+Y SR
Sbjct: 674 DREYMSR 680
>emb|CBI34075.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 694 bits (1790), Expect = 0.0
Identities = 353/610 (57%), Positives = 437/610 (71%), Gaps = 9/610 (1%)
Frame = +2
Query: 281 MKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFVRFAT 460
+KERRKRKEFE+FVGGLDRD E+D+ F QVG++TEVRLMKN +TQKNKGF F+RFAT
Sbjct: 177 VKERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFIRFAT 236
Query: 461 VEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAIFREKLVHHGVDKFEE 640
VEQARRA+NELKHP +NGKQCGV+PSQDSDTLFVGNICKTWTK ++KL ++GVDK+E+
Sbjct: 237 VEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVDKYED 296
Query: 641 VTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFIEPDD 820
+TLVED KNEG+NRGFAFLDFS RADALEACKRLQK DVVFGTDR+A+VAFADTFIEPDD
Sbjct: 297 LTLVEDTKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFIEPDD 356
Query: 821 EIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFDTHDA 1000
EIM+QVRT+FLDGLPA+WDEDR +++KKFG++EK+ELARNMPAAKRTDFGF+TFDTHD+
Sbjct: 357 EIMSQVRTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFDTHDS 416
Query: 1001 AVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXTSWDSS 1180
AVACVD +NN+EL DG + VKVRARLSRPRQRGKS++HA W SS
Sbjct: 417 AVACVDSINNSELVDGERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAPWGSS 476
Query: 1181 ----DSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITEMASSRIDSRRRLPSSERSY 1348
DSW + GR GR MQ+ Y GG KRP+G R+R+ + EM +R+ SRRR PS E S+
Sbjct: 477 SSRMDSWKFTGRGGRSMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSPESSF 536
Query: 1349 DRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRSSNYVS 1528
RRSP + +SS++REY++ DE + R + F
Sbjct: 537 GRRSP--VYEKSSTKREYIQRDESFSRPAVF----------------------------- 565
Query: 1529 KTRSSDFVTKGASEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHME 1708
+ +E+R+ Y+D Y SR SEYLDSP ++ Y R++E
Sbjct: 566 --------ARDPTERRY-YKDNYSSRGSEYLDSP-PRNVSRAAGHRAPLYEDDDYDRYLE 615
Query: 1709 RPSSYRGSQSHDYGSVSGSKRPHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYNDRA 1888
RP++Y HDYGS+S SKR H++MEE SR+ E +R SRARFDYG SN +PY+D
Sbjct: 616 RPTNYHDGHRHDYGSISSSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPYDDH- 674
Query: 1889 YGSESTS-ARVGRGTHLGYERGSRSSAGHSQGVYDTHTSSAYSR----DEGRRADMGGAY 2053
YGSESTS R+GRG+ LGY+ G RSS+GHS+G+Y+T TS+ R D+ R + G Y
Sbjct: 675 YGSESTSERRMGRGSRLGYDGGMRSSSGHSRGMYETRTSTTGYRRVLADDISRGNEEGMY 734
Query: 2054 SSYERDYPSR 2083
SSY+R+Y SR
Sbjct: 735 SSYDREYMSR 744
>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product
[Vitis vinifera]
Length = 812
Score = 548 bits (1411), Expect = e-153
Identities = 309/606 (50%), Positives = 391/606 (64%), Gaps = 6/606 (0%)
Frame = +2
Query: 284 KERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFVRFATV 463
KERRKRKEFE+FVGGLD+DA E+D+RKVFSQVGEVTEVRLM NP T+KNKGF F+RFATV
Sbjct: 224 KERRKRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATV 283
Query: 464 EQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAIFREKLVHHGVDKFEEV 643
EQA+RA+ ELK+P VNGKQCGV+PSQDSDTLF+GNICKTWTK +EKL H+GV+ E++
Sbjct: 284 EQAKRAVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDL 343
Query: 644 TLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFIEPDDE 823
TLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DVVFG DR+AKV+FAD+FI+P DE
Sbjct: 344 TLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDE 403
Query: 824 IMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFDTHDAA 1003
IMAQV+TVF+DGLPASWDEDR E +KK+G++EK+ELARNMP+AKR DFGF+TFDTHDAA
Sbjct: 404 IMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAA 463
Query: 1004 VACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXT-SWDSS 1180
V C +NN ELG+G K KVRARLSRP QRGK + SW
Sbjct: 464 VTCAKSINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRGSWARP 523
Query: 1181 DSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITEMASSRIDSRRRLPSSERSYDRRS 1360
+ GR R + R KRP+G R+R P+ M R LP RSYDRR+
Sbjct: 524 ALRSFPGRGARGL-GPRLPPAAVKRPIGFRDRRPVMAMP----PRGRPLPPPSRSYDRRA 578
Query: 1361 PGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRSSNYVSKTRS 1540
P A+ + + +R+Y R +E RS RP +
Sbjct: 579 PVPAYPKPNLKRDYGRREEVPLRS-------RP--------------------------A 605
Query: 1541 SDFVTKGASEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHMER--P 1714
D+ ++ A E+R SYRD Y +R S Y D P+ +++YG+ ER P
Sbjct: 606 VDYGSRVAPERRPSYRDDYATRGSGYSDIPR----NTSRTAARRTYEDDAYGQRFERPPP 661
Query: 1715 SSYRGSQSHDYGSVSGSKRPHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYNDRAYG 1894
SYR + DY S++GSKRP+ ++++ R+ +++VRQSRAR DY +S Y D AYG
Sbjct: 662 PSYREGRPRDYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYEMSAGASQYGD-AYG 720
Query: 1895 SESTSARVGRGTHLGYERGSRS--SAGHSQGVYDTHTSSAYSRDEGRRADMGGAY-SSYE 2065
R+GR ++LGY GSRS S+ S G+Y + Y +D+GG Y SSY
Sbjct: 721 D-----RLGR-SNLGY-GGSRSSMSSQDSHGLYSSRQGMGYGGGSFGGSDVGGMYSSSYG 773
Query: 2066 RDYPSR 2083
DY R
Sbjct: 774 SDYMPR 779
>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein, putative
[Ricinus communis]
Length = 784
Score = 527 bits (1357), Expect = e-147
Identities = 304/613 (49%), Positives = 387/613 (63%), Gaps = 13/613 (2%)
Frame = +2
Query: 284 KERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFVRFATV 463
KERRKRKEFE+FVGGLD+DA E+D+RKVF++VGEVTEVRLM NP T+KNKGF F+RF+TV
Sbjct: 205 KERRKRKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFSTV 264
Query: 464 EQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAIFREKLVHHGVDKFEEV 643
EQA++A+ ELK+P +NGKQCGV+PSQDSDTLF+GNICKTWTK +EKL H+GV+ E+V
Sbjct: 265 EQAKKAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDV 324
Query: 644 TLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFIEPDDE 823
TLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DV+FG DR AKV+FAD+FI+P DE
Sbjct: 325 TLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDE 384
Query: 824 IMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFDTHDAA 1003
IMAQV+TVF+DGLPASWDEDR E +KKFG++EK+ELARNMP+AKR DFGF+TFD+HDAA
Sbjct: 385 IMAQVKTVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDAA 444
Query: 1004 VACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXTSWDSSD 1183
V C +NN ELG+G K KVRARLSRP QRGK +HA S
Sbjct: 445 VTCAKSINNAELGEGDNKAKVRARLSRPLQRGK-GKHA----------------SRADFR 487
Query: 1184 SWGYAGRSGRDMQ-------SHRTYSGGFKRPLGSRERYPITEMASSRIDSRRRLPSSER 1342
SW Y GR+ R + R KR +G R+R P R R LP R
Sbjct: 488 SW-YGGRTARGPWVRPVRGIASRAAPTSVKRHVGLRDRRPPVMSMPVR---GRPLPPPNR 543
Query: 1343 SYDRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRSSNY 1522
+YDRR+P ++ +SS +R+Y R +E P S
Sbjct: 544 TYDRRAPAPSYPKSSLKRDYGRREELPPPRS----------------------------- 574
Query: 1523 VSKTRSSDFVTKGASEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRH 1702
D+ ++ +E+R SYRD Y SR S Y D P+ ++ YG+
Sbjct: 575 ---RAPVDYSSRSVAERRQSYRDDYSSRGSGYSDIPR----GTSRSSARRAYVDDGYGQR 627
Query: 1703 MER-PSSYRGSQSHDYGSVSGSKRPHASMEEYQSRFPE--STVRQSRARFDYGVSNDDMP 1873
+ER P SYR ++ DY S+SGSKRP+++M++ R+ + + R SRAR DY +
Sbjct: 628 LERHPPSYREGRARDYDSISGSKRPYSAMDDVPPRYADGGAGTRHSRARLDYELGPSASQ 687
Query: 1874 YNDRAYGSESTSARVGRGTHLGYERGSRS--SAGHSQGVYDTHTSSAYSRDEGRRADMGG 2047
Y D AYG R+GR + +GY GSRS S+ S G+Y + Y G D+GG
Sbjct: 688 YGD-AYGD-----RIGRSS-VGY-GGSRSSLSSQDSHGLYTSRQGMGYGGSYGAN-DVGG 738
Query: 2048 AY-SSYERDYPSR 2083
Y SSY DY R
Sbjct: 739 MYQSSYGGDYMPR 751
>gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]
Length = 775
Score = 522 bits (1345), Expect = e-145
Identities = 301/604 (49%), Positives = 374/604 (61%), Gaps = 4/604 (0%)
Frame = +2
Query: 284 KERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFVRFATV 463
+ERRKRKEFE+FVGGLD+D +D+RKVFSQVGEVTEVRLM NP T+KNKGF F+RFATV
Sbjct: 189 QERRKRKEFEVFVGGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATV 248
Query: 464 EQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAIFREKLVHHGVDKFEEV 643
EQAR+A+ ELK+P +NGKQCGV+PSQDSDTLF+GNICKTWTK +EKL H+GVD E++
Sbjct: 249 EQARQAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDL 308
Query: 644 TLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFIEPDDE 823
TLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DV+FG DR AKV+FAD+FI+P DE
Sbjct: 309 TLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDE 368
Query: 824 IMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFDTHDAA 1003
IMAQV+TVF+DGLPASWDEDR E +K +G++ K+ELARNMP+AKR DFGF+TFDTHDAA
Sbjct: 369 IMAQVKTVFVDGLPASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAA 428
Query: 1004 VACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXTSWDSSD 1183
V C +NN ELG+G K KVRARLSRP QRGK + SW
Sbjct: 429 VTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGSWGLPS 488
Query: 1184 SWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITEMASSRIDSRRRLPSSERSYDRRSP 1363
GRS R + S R KRP+ R+R PI M + +R P RSYDRR+P
Sbjct: 489 PRSLPGRSARGIGS-RLPPASVKRPVPVRDRRPIMSMTAR---ARPMPPPPPRSYDRRAP 544
Query: 1364 GLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRSSNYVSKTRSS 1543
++ + +REY R DE P S P +Y S+
Sbjct: 545 VPSYPKPGLKREYGRRDEVPPPRSR-----APVDYGSR---------------------- 577
Query: 1544 DFVTKGASEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHMER-PSS 1720
R YRD Y SR S Y D P+ ++ Y + ER P S
Sbjct: 578 ------VVPDRRPYRDEYTSRGSGYPDMPR----STSRGAARRPYVDDGYAQRFERPPPS 627
Query: 1721 YRGSQSHDYGSVSGSKRPHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYNDRAYGSE 1900
YR ++ DY +VSGSKRP++ +++ R+ + VR SRAR DY + Y D AYG
Sbjct: 628 YREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGGAPQYGD-AYGD- 685
Query: 1901 STSARVGRGTHLGYERGSRS--SAGHSQGVYDTHTSSAYSRDEGRRADMGGAY-SSYERD 2071
R+GR ++LGY GSRS S+ S G+Y + Y D+GG Y SSY D
Sbjct: 686 ----RMGR-SNLGY-GGSRSSISSQDSHGLYSSRQGMGYGGSYS-GGDVGGMYSSSYGSD 738
Query: 2072 YPSR 2083
Y R
Sbjct: 739 YMPR 742