BLASTX nr result

ID: Coptis21_contig00003631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003631
         (1799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing ...   490   e-136
emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]   487   e-135
ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus ...   461   e-127
gb|AFH57270.1| RAV [Gossypium hirsutum]                               450   e-124
ref|XP_003516851.1| PREDICTED: AP2/ERF and B3 domain-containing ...   449   e-124

>ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
            TEM1-like [Vitis vinifera]
          Length = 358

 Score =  490 bits (1261), Expect = e-136
 Identities = 244/340 (71%), Positives = 282/340 (82%), Gaps = 9/340 (2%)
 Frame = +1

Query: 496  ASPEKESPEKLCRMGSGASVVLDSDGGIEAESRKLPSSQYKGVVPQPNGRWGAQIYEKHQ 675
            A P  +SPE LCR+GSG SV+LDS+  IEAESRKLPSS++KGVVPQPNGRWGAQIYEKHQ
Sbjct: 24   ALPATKSPESLCRVGSGTSVILDSESSIEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQ 83

Query: 676  RVWLGTFNEEEEAAKSYDIAAQRFRGRDAVTNFKPLSSTDEDNIEAAFLSSHSKAEIVDM 855
            RVWLGTFNEEEEAAK+YDIAAQRFRGRDAVTNFKPLS T+ED+IEAAFL+SHSKAEIVDM
Sbjct: 84   RVWLGTFNEEEEAAKAYDIAAQRFRGRDAVTNFKPLSETEEDDIEAAFLNSHSKAEIVDM 143

Query: 856  LRKHTYNDELEQSKRNYGIDTDKGRE----FMGYNRANRTSNARDSLFEKTVTPSDVGKL 1023
            LRKHTYNDELEQSKRNYG+D +  R      M    ++R + +R+ LFEKTVTPSDVGKL
Sbjct: 144  LRKHTYNDELEQSKRNYGLDANGKRSRAEGLMTPFGSDRVTKSREQLFEKTVTPSDVGKL 203

Query: 1024 NRLVIPKQHAEKNFPLQIGSISKGMLLNFEDISGKVWRFRYSYWNSSQSYVLTKGWSRFV 1203
            NRLVIPKQHAEK+FPLQ G+ SKG+LLNFED+ GKVWRFRYSYWNSSQSYVLTKGWSRFV
Sbjct: 204  NRLVIPKQHAEKHFPLQTGTTSKGVLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFV 263

Query: 1204 KEKNLKAGDVISFQRSTGQDKQLYIDWKPRNEPSSMLLVHPIQPVSPVQVIRLFGVNIFD 1383
            KEKNLKAGD++SFQRSTG DKQLYIDWK RN P++      I PV PV+++RLFGVNIF 
Sbjct: 264  KEKNLKAGDIVSFQRSTGGDKQLYIDWKARNGPTNQ-----INPVEPVEMVRLFGVNIFK 318

Query: 1384 IPMSS-----GNSNCNGKRLRDVEPFSIVSCKKPSIVEAL 1488
            +P++S      N +  GKR+ ++E  S    KK  ++ A+
Sbjct: 319  VPVNSSVVVANNGSWTGKRMIEMELLSFECSKKQRVIGAV 358


>emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]
          Length = 364

 Score =  487 bits (1254), Expect = e-135
 Identities = 243/333 (72%), Positives = 278/333 (83%), Gaps = 9/333 (2%)
 Frame = +1

Query: 496  ASPEKESPEKLCRMGSGASVVLDSDGGIEAESRKLPSSQYKGVVPQPNGRWGAQIYEKHQ 675
            A P  +SPE LCR+GSG SV+LDS+  IEAESRKLPSS++KGVVPQPNGRWGAQIYEKHQ
Sbjct: 24   ALPATKSPESLCRVGSGTSVILDSESSIEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQ 83

Query: 676  RVWLGTFNEEEEAAKSYDIAAQRFRGRDAVTNFKPLSSTDEDNIEAAFLSSHSKAEIVDM 855
            RVWLGTFNEEEEAAK+YDIAAQRFRGRDAVTNFKPLS T+ED+IEAAFL+SHSKAEIVDM
Sbjct: 84   RVWLGTFNEEEEAAKAYDIAAQRFRGRDAVTNFKPLSETEEDDIEAAFLNSHSKAEIVDM 143

Query: 856  LRKHTYNDELEQSKRNYGIDTDKGRE----FMGYNRANRTSNARDSLFEKTVTPSDVGKL 1023
            LRKHTYNDELEQSKRNYG+D +  R      M    ++R + +R+ LFEKTVTPSDVGKL
Sbjct: 144  LRKHTYNDELEQSKRNYGLDANGKRSRAEGLMTPFGSDRVTKSREQLFEKTVTPSDVGKL 203

Query: 1024 NRLVIPKQHAEKNFPLQIGSISKGMLLNFEDISGKVWRFRYSYWNSSQSYVLTKGWSRFV 1203
            NRLVIPKQHAEK+FPLQ G+ SKG+LLNFED+ GKVWRFRYSYWNSSQSYVLTKGWSRFV
Sbjct: 204  NRLVIPKQHAEKHFPLQTGTTSKGVLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFV 263

Query: 1204 KEKNLKAGDVISFQRSTGQDKQLYIDWKPRNEPSSMLLVHPIQPVSPVQVIRLFGVNIFD 1383
            KEKNLKAGD++SFQRSTG DKQLYIDWK RN P++      I PV PV+++RLFGVNIF 
Sbjct: 264  KEKNLKAGDIVSFQRSTGGDKQLYIDWKARNGPTNQ-----INPVEPVEMVRLFGVNIFK 318

Query: 1384 IPMSS-----GNSNCNGKRLRDVEPFSIVSCKK 1467
            +P++S      N +  GKR+ ++E  S    KK
Sbjct: 319  VPVNSSVVVANNGSWTGKRMIEMELLSFECSKK 351


>ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
            gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1,
            putative [Ricinus communis]
          Length = 371

 Score =  461 bits (1187), Expect = e-127
 Identities = 236/343 (68%), Positives = 271/343 (79%), Gaps = 14/343 (4%)
 Frame = +1

Query: 502  PEKESPEKLCRMGSGASVVLDSDGGIEAESRKLPSSQYKGVVPQPNGRWGAQIYEKHQRV 681
            P K     LCR+GSG SVVLDS+ GIEAESRKLPSS+YKGVVPQPNGRWGAQIYEKHQRV
Sbjct: 31   PSKSPESPLCRVGSGTSVVLDSESGIEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRV 90

Query: 682  WLGTFNEEEEAAKSYDIAAQRFRGRDAVTNFKPLSS---TDEDNIEAAFLSSHSKAEIVD 852
            WLGTFNEE+EAAK+YDIAAQRFRGRDA+TNFKP ++   ++ED IE AFL+SHSKAEIVD
Sbjct: 91   WLGTFNEEDEAAKAYDIAAQRFRGRDAITNFKPQATDHQSEEDEIETAFLNSHSKAEIVD 150

Query: 853  MLRKHTYNDELEQSKRNYGIDTDKGREFMGYNRANRTS---------NARDSLFEKTVTP 1005
            MLRKHTYNDELEQSKRNY  +  +G +F      N             AR+ LFEK VTP
Sbjct: 151  MLRKHTYNDELEQSKRNYTSNNGRGDKFQNRTNMNNVGLSGSERIIMKAREQLFEKAVTP 210

Query: 1006 SDVGKLNRLVIPKQHAEKNFPLQIGSIS-KGMLLNFEDISGKVWRFRYSYWNSSQSYVLT 1182
            SDVGKLNRLVIPKQHAEK+FPLQ GS S KG+LLNFEDI+GKVWRFRYSYWNSSQSYVLT
Sbjct: 211  SDVGKLNRLVIPKQHAEKHFPLQSGSNSTKGVLLNFEDITGKVWRFRYSYWNSSQSYVLT 270

Query: 1183 KGWSRFVKEKNLKAGDVISFQRSTGQDKQLYIDWKPRNEPSSMLLVHPIQ-PVSPVQVIR 1359
            KGWSRFVKEKNLKAGD++ F +STG DKQLYIDWK R    +  + +P+   V PVQ++R
Sbjct: 271  KGWSRFVKEKNLKAGDIVRFLKSTGPDKQLYIDWKVRT--LTPTVSNPVVCSVQPVQMVR 328

Query: 1360 LFGVNIFDIPMSSGNSNCNGKRLRDVEPFSIVSCKKPSIVEAL 1488
            LFGVNIF +P +S    CNGKR+R++E  S+   KK  ++ AL
Sbjct: 329  LFGVNIFKVPGNSHIEGCNGKRIREMELLSLDCIKKQRVIGAL 371


>gb|AFH57270.1| RAV [Gossypium hirsutum]
          Length = 357

 Score =  450 bits (1158), Expect = e-124
 Identities = 229/333 (68%), Positives = 266/333 (79%), Gaps = 7/333 (2%)
 Frame = +1

Query: 511  ESPEKLCRMGSGASVVLDSDGGIEAESRKLPSSQYKGVVPQPNGRWGAQIYEKHQRVWLG 690
            +SP+ L R+GSG SV++DS+ G+EAESRKLPSS+YKGVVPQPNGRWGAQIYEKHQRVWLG
Sbjct: 32   KSPDSLYRVGSGTSVIVDSESGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLG 91

Query: 691  TFNEEEEAAKSYDIAAQRFRGRDAVTNFKPLSSTDEDNIEAAFLSSHSKAEIVDMLRKHT 870
            TFNEE+EAAK+YDIAAQRFRGRDAVTNFK L   ++D+I+ AFL+SHSKAEIVDMLRKHT
Sbjct: 92   TFNEEDEAAKAYDIAAQRFRGRDAVTNFKHLHEMEDDDIQIAFLNSHSKAEIVDMLRKHT 151

Query: 871  YNDELEQSKRNYGIDTDKG---REFMGYNRANRTSNARDSLFEKTVTPSDVGKLNRLVIP 1041
            YNDELEQS+R+YG D +     R+  G+        AR+ LFEK VTPSDVGKLNRLVIP
Sbjct: 152  YNDELEQSRRSYGFDGNGKRIVRKEDGFGTLGFELKAREQLFEKAVTPSDVGKLNRLVIP 211

Query: 1042 KQHAEKNFPLQIGSI-SKGMLLNFEDISGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL 1218
            KQHAEK FPLQ GS  SKG+LLNFED++GKVWRFRYSYWNSSQSYVL KGWSRFVKEKNL
Sbjct: 212  KQHAEKYFPLQSGSASSKGVLLNFEDVTGKVWRFRYSYWNSSQSYVLIKGWSRFVKEKNL 271

Query: 1219 KAGDVISFQRSTGQDKQLYIDWKPRNEPSSMLLVHPIQPVSPVQVIRLFGVNIFDIPMSS 1398
            KAGD++SFQRSTG +KQLYIDWK R    S L        +PVQ++RLFGVNIF +P S 
Sbjct: 272  KAGDIVSFQRSTGTEKQLYIDWKARTGLGSGL-------ENPVQMVRLFGVNIFKMPGSE 324

Query: 1399 G---NSNCNGKRLRDVEPFSIVSCKKPSIVEAL 1488
                   CNGKR R++E   +   KK  +++AL
Sbjct: 325  NVGLAGGCNGKRTREMELLELECSKKQRVIDAL 357


>ref|XP_003516851.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
            TEM1-like [Glycine max]
          Length = 384

 Score =  449 bits (1156), Expect = e-124
 Identities = 233/356 (65%), Positives = 271/356 (76%), Gaps = 25/356 (7%)
 Frame = +1

Query: 496  ASPEKESPEKLCRMGSGASVVLDSDGG-----IEAESRKLPSSQYKGVVPQPNGRWGAQI 660
            ASP    P +LCR+GSGAS V+DSDGG      E ESRKLPSS+YKGVVPQPNGRWG+QI
Sbjct: 33   ASPSPPPPNRLCRVGSGASAVVDSDGGGGGGSTEVESRKLPSSKYKGVVPQPNGRWGSQI 92

Query: 661  YEKHQRVWLGTFNEEEEAAKSYDIAAQRFRGRDAVTNFKPLSSTDEDNIEAAFLSSHSKA 840
            YEKHQRVWLGTFNEE+EAA++YD+A QRFRG+DAVTNFKPLS TD+D+ E+ FL+SHSK+
Sbjct: 93   YEKHQRVWLGTFNEEDEAARAYDVAVQRFRGKDAVTNFKPLSGTDDDDGESEFLNSHSKS 152

Query: 841  EIVDMLRKHTYNDELEQSKRNYGIDTDKGREFMGYNRANRTS-----NARDSLFEKTVTP 1005
            EIVDMLRKHTYNDELEQSKR+ G    +G    G    N  S      AR+ LF+K VTP
Sbjct: 153  EIVDMLRKHTYNDELEQSKRSRGFVRRRG-SAAGAGNGNSISGACVMKAREQLFQKAVTP 211

Query: 1006 SDVGKLNRLVIPKQHAEKNFPLQ--------IGSISKGMLLNFEDISGKVWRFRYSYWNS 1161
            SDVGKLNRLVIPKQHAEK+FPLQ          + +KG+LLNFED+ GKVWRFRYSYWNS
Sbjct: 212  SDVGKLNRLVIPKQHAEKHFPLQSAANGVSATATAAKGVLLNFEDVGGKVWRFRYSYWNS 271

Query: 1162 SQSYVLTKGWSRFVKEKNLKAGDVISFQRSTGQDKQLYIDWKPRNEPSSMLLVHPIQPVS 1341
            SQSYVLTKGWSRFVKEKNLKAGD + FQRSTG D+QLYIDWK RN  + + L  P+  V 
Sbjct: 272  SQSYVLTKGWSRFVKEKNLKAGDTVCFQRSTGPDRQLYIDWKTRNVVNEVALFGPV--VE 329

Query: 1342 PVQVIRLFGVNIFDIPMSSGNSN-------CNGKRLRDVEPFSIVSCKKPSIVEAL 1488
            P+Q++RLFGVNI  +P S   +N       CNGKR R++E FS+   KKP I+ AL
Sbjct: 330  PIQMVRLFGVNILKLPGSDSIANNNNASGCCNGKR-REMELFSLECSKKPKIIGAL 384


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