BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003626
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16259.3| unnamed protein product [Vitis vinifera]               84   6e-14
ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...    84   6e-14
ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p...    82   3e-13
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...    81   4e-13
gb|ABK93461.1| unknown [Populus trichocarpa]                           80   1e-12

>emb|CBI16259.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 41/79 (51%), Positives = 60/79 (75%)
 Frame = +3

Query: 807  GTRWKGKGSEAFALSNPMSKIVSSLENYLTQSKASGLLLDRAVLVDVELEQANLLDQACF 986
            G RWKGKG+EA AL+ PMS+IVS L++ LT+S + GLL   +VL++   EQ  LL+++CF
Sbjct: 2    GPRWKGKGAEAKALAEPMSEIVSQLQSSLTRSDSQGLLSGCSVLLEAGAEQTELLNRSCF 61

Query: 987  GCHIVTACKDKKRYELSLE 1043
            G  ++TA KDK+ ++LS+E
Sbjct: 62   GRPVITAEKDKQWFQLSME 80


>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis vinifera]
          Length = 242

 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 41/79 (51%), Positives = 60/79 (75%)
 Frame = +3

Query: 807  GTRWKGKGSEAFALSNPMSKIVSSLENYLTQSKASGLLLDRAVLVDVELEQANLLDQACF 986
            G RWKGKG+EA AL+ PMS+IVS L++ LT+S + GLL   +VL++   EQ  LL+++CF
Sbjct: 2    GPRWKGKGAEAKALAEPMSEIVSQLQSSLTRSDSQGLLSGCSVLLEAGAEQTELLNRSCF 61

Query: 987  GCHIVTACKDKKRYELSLE 1043
            G  ++TA KDK+ ++LS+E
Sbjct: 62   GRPVITAEKDKQWFQLSME 80


>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
            communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
            endonuclease subunit Sen2-2, putative [Ricinus communis]
          Length = 237

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 43/79 (54%), Positives = 57/79 (72%)
 Frame = +3

Query: 807  GTRWKGKGSEAFALSNPMSKIVSSLENYLTQSKASGLLLDRAVLVDVELEQANLLDQACF 986
            GTRWKGKGSEA A ++PMSKI+S L + L Q  A GLL   +VL+ VE EQ  LL +ACF
Sbjct: 2    GTRWKGKGSEAKAAADPMSKIISQLCSSLIQFDAHGLLSGCSVLLAVESEQTELLTRACF 61

Query: 987  GCHIVTACKDKKRYELSLE 1043
            G  ++T+ KDK+ ++L +E
Sbjct: 62   GRPMITSEKDKQWFQLGIE 80


>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
            predicted protein [Populus trichocarpa]
          Length = 235

 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 43/79 (54%), Positives = 57/79 (72%)
 Frame = +3

Query: 807  GTRWKGKGSEAFALSNPMSKIVSSLENYLTQSKASGLLLDRAVLVDVELEQANLLDQACF 986
            G RWKGKG+EA AL++PMS+IVS L++ L QS A   L   +VL+ VE EQ  LL +ACF
Sbjct: 2    GPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEQTELLTRACF 61

Query: 987  GCHIVTACKDKKRYELSLE 1043
            G  I+TA K+K+ ++L LE
Sbjct: 62   GKPIITAEKEKQWFQLGLE 80


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 42/79 (53%), Positives = 57/79 (72%)
 Frame = +3

Query: 807  GTRWKGKGSEAFALSNPMSKIVSSLENYLTQSKASGLLLDRAVLVDVELEQANLLDQACF 986
            G RWKGKG+EA AL++PMS+IVS L++ L QS A   L   +VL+ VE E+  LL +ACF
Sbjct: 2    GPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEKTELLTRACF 61

Query: 987  GCHIVTACKDKKRYELSLE 1043
            G  I+TA K+K+ ++L LE
Sbjct: 62   GKPIITAEKEKQWFQLGLE 80