BLASTX nr result
ID: Coptis21_contig00003626
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003626 (1044 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI16259.3| unnamed protein product [Vitis vinifera] 84 6e-14 ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni... 84 6e-14 ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p... 82 3e-13 ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2... 81 4e-13 gb|ABK93461.1| unknown [Populus trichocarpa] 80 1e-12 >emb|CBI16259.3| unnamed protein product [Vitis vinifera] Length = 232 Score = 84.0 bits (206), Expect = 6e-14 Identities = 41/79 (51%), Positives = 60/79 (75%) Frame = +3 Query: 807 GTRWKGKGSEAFALSNPMSKIVSSLENYLTQSKASGLLLDRAVLVDVELEQANLLDQACF 986 G RWKGKG+EA AL+ PMS+IVS L++ LT+S + GLL +VL++ EQ LL+++CF Sbjct: 2 GPRWKGKGAEAKALAEPMSEIVSQLQSSLTRSDSQGLLSGCSVLLEAGAEQTELLNRSCF 61 Query: 987 GCHIVTACKDKKRYELSLE 1043 G ++TA KDK+ ++LS+E Sbjct: 62 GRPVITAEKDKQWFQLSME 80 >ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis vinifera] Length = 242 Score = 84.0 bits (206), Expect = 6e-14 Identities = 41/79 (51%), Positives = 60/79 (75%) Frame = +3 Query: 807 GTRWKGKGSEAFALSNPMSKIVSSLENYLTQSKASGLLLDRAVLVDVELEQANLLDQACF 986 G RWKGKG+EA AL+ PMS+IVS L++ LT+S + GLL +VL++ EQ LL+++CF Sbjct: 2 GPRWKGKGAEAKALAEPMSEIVSQLQSSLTRSDSQGLLSGCSVLLEAGAEQTELLNRSCF 61 Query: 987 GCHIVTACKDKKRYELSLE 1043 G ++TA KDK+ ++LS+E Sbjct: 62 GRPVITAEKDKQWFQLSME 80 >ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus communis] gi|223534295|gb|EEF36007.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus communis] Length = 237 Score = 81.6 bits (200), Expect = 3e-13 Identities = 43/79 (54%), Positives = 57/79 (72%) Frame = +3 Query: 807 GTRWKGKGSEAFALSNPMSKIVSSLENYLTQSKASGLLLDRAVLVDVELEQANLLDQACF 986 GTRWKGKGSEA A ++PMSKI+S L + L Q A GLL +VL+ VE EQ LL +ACF Sbjct: 2 GTRWKGKGSEAKAAADPMSKIISQLCSSLIQFDAHGLLSGCSVLLAVESEQTELLTRACF 61 Query: 987 GCHIVTACKDKKRYELSLE 1043 G ++T+ KDK+ ++L +E Sbjct: 62 GRPMITSEKDKQWFQLGIE 80 >ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1| predicted protein [Populus trichocarpa] Length = 235 Score = 81.3 bits (199), Expect = 4e-13 Identities = 43/79 (54%), Positives = 57/79 (72%) Frame = +3 Query: 807 GTRWKGKGSEAFALSNPMSKIVSSLENYLTQSKASGLLLDRAVLVDVELEQANLLDQACF 986 G RWKGKG+EA AL++PMS+IVS L++ L QS A L +VL+ VE EQ LL +ACF Sbjct: 2 GPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEQTELLTRACF 61 Query: 987 GCHIVTACKDKKRYELSLE 1043 G I+TA K+K+ ++L LE Sbjct: 62 GKPIITAEKEKQWFQLGLE 80 >gb|ABK93461.1| unknown [Populus trichocarpa] Length = 235 Score = 79.7 bits (195), Expect = 1e-12 Identities = 42/79 (53%), Positives = 57/79 (72%) Frame = +3 Query: 807 GTRWKGKGSEAFALSNPMSKIVSSLENYLTQSKASGLLLDRAVLVDVELEQANLLDQACF 986 G RWKGKG+EA AL++PMS+IVS L++ L QS A L +VL+ VE E+ LL +ACF Sbjct: 2 GPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEKTELLTRACF 61 Query: 987 GCHIVTACKDKKRYELSLE 1043 G I+TA K+K+ ++L LE Sbjct: 62 GKPIITAEKEKQWFQLGLE 80