BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003625
         (2150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34928.3| unnamed protein product [Vitis vinifera]              549   e-153
ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subun...   549   e-153
ref|XP_002517336.1| protein farnesyltransferase beta subunit, pu...   523   e-146
ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subun...   521   e-145
sp|Q04903.1|FNTB_PEA RecName: Full=Protein farnesyltransferase s...   516   e-144

>emb|CBI34928.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  549 bits (1414), Expect = e-153
 Identities = 267/375 (71%), Positives = 311/375 (82%)
 Frame = -3

Query: 2148 FCVLDANRPWLCYWILHSMALLEESVDCDLEKGAVDFLSRCQDSHXXXXXXXGQMPHLAT 1969
            FCVLDANRPWLCYWILHS+ALL +SVD +LE   +DFLSRCQD +       GQMPHLAT
Sbjct: 47   FCVLDANRPWLCYWILHSIALLGDSVDDELENNTIDFLSRCQDPNGGYGGGPGQMPHLAT 106

Query: 1968 TYAAVNSLLTLGGERALSSINREKLHRFLLRMKDQSGGFRMHNAGEMDVRACYTAISVAS 1789
            TYAA+N+L+TLGG R+LSSINR K++ FL RMKD SG FRMH+AGEMDVRACYTAISVAS
Sbjct: 107  TYAAINALITLGGHRSLSSINRGKVYTFLRRMKDPSGAFRMHDAGEMDVRACYTAISVAS 166

Query: 1788 ILNILDDELVQNVGDFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPS 1609
            +L ILDDELV+ VG+FIL CQTYEGGI+GEPGSEAHGGYTFCGLATM+LI E +RLDL S
Sbjct: 167  VLTILDDELVKGVGNFILSCQTYEGGISGEPGSEAHGGYTFCGLATMVLIGEVNRLDLTS 226

Query: 1608 LLDWVVFRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLNVGEEETRG 1429
            L+DWVVFRQGVE GFQGR NKLVDGCYSFWQGGVFALIQ+L S+  + L+L         
Sbjct: 227  LIDWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALIQKLHSIIEEQLRLLDAGGSAID 286

Query: 1428 STQNVGSSNVSDREEGSGSLNTSDKNYSDIGFSYIKRPAESGPLFHSIALQQYILLCSQV 1249
            S Q + S +    + G    + S K +S+IGF+++K PAE  PLFHSIALQQYI+LCSQ+
Sbjct: 287  SPQ-LASISCHSGKRGLHDTSGSAK-FSNIGFNFLKEPAEMEPLFHSIALQQYIILCSQL 344

Query: 1248 QEGGFKDKPGKYRDYYHTCYCLSGLSVCQHCWSKDSDSSPFPKAVFGPYSNLLEPIHPLY 1069
            QEGGF+DKPGK+RDYYHTCYCLSGLSV Q+ +SKD+DS P P+AVFGPYSNLLEPIHPLY
Sbjct: 345  QEGGFRDKPGKHRDYYHTCYCLSGLSVAQYSYSKDADSPPLPRAVFGPYSNLLEPIHPLY 404

Query: 1068 NIMLDRYYEAHDFFS 1024
            N++LD Y+EAH+FFS
Sbjct: 405  NVILDLYHEAHEFFS 419


>ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subunit beta-like isoform 1
            [Vitis vinifera]
          Length = 438

 Score =  549 bits (1414), Expect = e-153
 Identities = 267/375 (71%), Positives = 311/375 (82%)
 Frame = -3

Query: 2148 FCVLDANRPWLCYWILHSMALLEESVDCDLEKGAVDFLSRCQDSHXXXXXXXGQMPHLAT 1969
            FCVLDANRPWLCYWILHS+ALL +SVD +LE   +DFLSRCQD +       GQMPHLAT
Sbjct: 64   FCVLDANRPWLCYWILHSIALLGDSVDDELENNTIDFLSRCQDPNGGYGGGPGQMPHLAT 123

Query: 1968 TYAAVNSLLTLGGERALSSINREKLHRFLLRMKDQSGGFRMHNAGEMDVRACYTAISVAS 1789
            TYAA+N+L+TLGG R+LSSINR K++ FL RMKD SG FRMH+AGEMDVRACYTAISVAS
Sbjct: 124  TYAAINALITLGGHRSLSSINRGKVYTFLRRMKDPSGAFRMHDAGEMDVRACYTAISVAS 183

Query: 1788 ILNILDDELVQNVGDFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPS 1609
            +L ILDDELV+ VG+FIL CQTYEGGI+GEPGSEAHGGYTFCGLATM+LI E +RLDL S
Sbjct: 184  VLTILDDELVKGVGNFILSCQTYEGGISGEPGSEAHGGYTFCGLATMVLIGEVNRLDLTS 243

Query: 1608 LLDWVVFRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLNVGEEETRG 1429
            L+DWVVFRQGVE GFQGR NKLVDGCYSFWQGGVFALIQ+L S+  + L+L         
Sbjct: 244  LIDWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALIQKLHSIIEEQLRLLDAGGSAID 303

Query: 1428 STQNVGSSNVSDREEGSGSLNTSDKNYSDIGFSYIKRPAESGPLFHSIALQQYILLCSQV 1249
            S Q + S +    + G    + S K +S+IGF+++K PAE  PLFHSIALQQYI+LCSQ+
Sbjct: 304  SPQ-LASISCHSGKRGLHDTSGSAK-FSNIGFNFLKEPAEMEPLFHSIALQQYIILCSQL 361

Query: 1248 QEGGFKDKPGKYRDYYHTCYCLSGLSVCQHCWSKDSDSSPFPKAVFGPYSNLLEPIHPLY 1069
            QEGGF+DKPGK+RDYYHTCYCLSGLSV Q+ +SKD+DS P P+AVFGPYSNLLEPIHPLY
Sbjct: 362  QEGGFRDKPGKHRDYYHTCYCLSGLSVAQYSYSKDADSPPLPRAVFGPYSNLLEPIHPLY 421

Query: 1068 NIMLDRYYEAHDFFS 1024
            N++LD Y+EAH+FFS
Sbjct: 422  NVILDLYHEAHEFFS 436


>ref|XP_002517336.1| protein farnesyltransferase beta subunit, putative [Ricinus communis]
            gi|223543347|gb|EEF44878.1| protein farnesyltransferase
            beta subunit, putative [Ricinus communis]
          Length = 438

 Score =  523 bits (1347), Expect = e-146
 Identities = 259/379 (68%), Positives = 298/379 (78%), Gaps = 4/379 (1%)
 Frame = -3

Query: 2148 FCVLDANRPWLCYWILHSMALLEESVDCDLEKGAVDFLSRCQDSHXXXXXXXGQMPHLAT 1969
            FCVLDANRPWLCYWILHS+ALL ES+D +LE  A+DFL+RCQD +       GQ+PHLAT
Sbjct: 67   FCVLDANRPWLCYWILHSIALLGESIDYELENNAIDFLNRCQDPNGGFGGGPGQLPHLAT 126

Query: 1968 TYAAVNSLLTLGGERALSSINREKLHRFLLRMKDQSGGFRMHNAGEMDVRACYTAISV-A 1792
            TYAAVNSL+TLGG RALSSINR KL+ FL RMKD SG FRMH+AGE+DVRACYTAISV A
Sbjct: 127  TYAAVNSLVTLGGPRALSSINRGKLYTFLRRMKDPSGPFRMHDAGEIDVRACYTAISVCA 186

Query: 1791 SILNILDDELVQNVGDFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLP 1612
            +ILNILDDELV++VG++IL CQTYEGGIAGEPGSEAHGGYTFCGLATMILI+E +RLDL 
Sbjct: 187  NILNILDDELVRDVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLATMILINEVNRLDLS 246

Query: 1611 SLLDWVVFRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLN---VGEE 1441
            SL++WVVFRQGVECGFQGR NKLVDGCYSFWQGGVFAL+QRL S+ G+H   +    G  
Sbjct: 247  SLINWVVFRQGVECGFQGRTNKLVDGCYSFWQGGVFALLQRLRSIGGEHAAFSDAEAGHC 306

Query: 1440 ETRGSTQNVGSSNVSDREEGSGSLNTSDKNYSDIGFSYIKRPAESGPLFHSIALQQYILL 1261
             T  S+++ G+   S   +  G                      + PLFHS ALQQYI+L
Sbjct: 307  ATESSSEDEGTDGDSTDVDEPGHFKQGGHGV-------------TVPLFHSSALQQYIIL 353

Query: 1260 CSQVQEGGFKDKPGKYRDYYHTCYCLSGLSVCQHCWSKDSDSSPFPKAVFGPYSNLLEPI 1081
            CSQ QEGGF+DKPGK RDYYHTCYCLSGLSVCQ+ WSKD +S P P+AV GPYSNLLEPI
Sbjct: 354  CSQEQEGGFRDKPGKARDYYHTCYCLSGLSVCQYSWSKDENSPPLPRAVLGPYSNLLEPI 413

Query: 1080 HPLYNIMLDRYYEAHDFFS 1024
            HPLYN++  +Y  AH+FFS
Sbjct: 414  HPLYNVVSKQYDGAHEFFS 432


>ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subunit beta [Glycine max]
          Length = 455

 Score =  521 bits (1342), Expect = e-145
 Identities = 250/379 (65%), Positives = 296/379 (78%), Gaps = 5/379 (1%)
 Frame = -3

Query: 2148 FCVLDANRPWLCYWILHSMALLEESVDCDLEKGAVDFLSRCQDSHXXXXXXXGQMPHLAT 1969
            F VLDANRPWLCYWI HS+AL  ESVD +LE  A+DFL+RCQD +       GQMPH+AT
Sbjct: 73   FSVLDANRPWLCYWIFHSIALSGESVDDELEDNAIDFLNRCQDPNGGYAGGPGQMPHIAT 132

Query: 1968 TYAAVNSLLTLGGERALSSINREKLHRFLLRMKDQSGGFRMHNAGEMDVRACYTAISVAS 1789
            TYAAVNSL+TLGGE++L+SINR+KL+ FL RMK  +GGFRMH+ GE+DVRACYTAISVAS
Sbjct: 133  TYAAVNSLITLGGEKSLASINRDKLYGFLRRMKQPNGGFRMHDEGEIDVRACYTAISVAS 192

Query: 1788 ILNILDDELVQNVGDFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPS 1609
            +LNILDDEL+QNVGD+I+ CQTYEGGIAGEPGSEAHGGYTFCGLATMILI E + LDLP 
Sbjct: 193  VLNILDDELIQNVGDYIISCQTYEGGIAGEPGSEAHGGYTFCGLATMILIGEVNHLDLPR 252

Query: 1608 LLDWVVFRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLK-----LNVGE 1444
            L+DWVVFRQG ECGFQGR NKLVDGCYSFWQGG  AL+QRL S+  + ++       V  
Sbjct: 253  LVDWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLSSIINKQMEETSQIFAVSY 312

Query: 1443 EETRGSTQNVGSSNVSDREEGSGSLNTSDKNYSDIGFSYIKRPAESGPLFHSIALQQYIL 1264
                  + +  SS+ + R E  G+  +S  ++ +I + +I       PLFHSIALQQYIL
Sbjct: 313  VSEAKESLDGTSSHATCRGEHEGTSESSSSDFKNIAYKFINEWRAQEPLFHSIALQQYIL 372

Query: 1263 LCSQVQEGGFKDKPGKYRDYYHTCYCLSGLSVCQHCWSKDSDSSPFPKAVFGPYSNLLEP 1084
            LC+Q QEGG +DKPGK RD+YHTCYCLSGLS+CQ+ WSK  DS P P  V GPYSNLLEP
Sbjct: 373  LCAQEQEGGLRDKPGKRRDHYHTCYCLSGLSLCQYSWSKHPDSPPLPNLVLGPYSNLLEP 432

Query: 1083 IHPLYNIMLDRYYEAHDFF 1027
            IHPL+N++L RY EAH+FF
Sbjct: 433  IHPLFNVVLGRYREAHEFF 451


>sp|Q04903.1|FNTB_PEA RecName: Full=Protein farnesyltransferase subunit beta;
            Short=FTase-beta; AltName: Full=CAAX farnesyltransferase
            subunit beta; AltName: Full=Ras proteins
            prenyltransferase subunit beta gi|169049|gb|AAA33649.1|
            farnesyl-protein transferase beta-subunit [Pisum sativum]
          Length = 419

 Score =  516 bits (1329), Expect = e-144
 Identities = 253/377 (67%), Positives = 299/377 (79%), Gaps = 9/377 (2%)
 Frame = -3

Query: 2127 RPWLCYWILHSMALLEESVDCDLEKGAVDFLSRCQDSHXXXXXXXGQMPHLATTYAAVNS 1948
            RPWLCYWI+HS+ALL ES+D DLE   VDFL+RCQD +       GQMPHLATTYAAVN+
Sbjct: 45   RPWLCYWIIHSIALLGESIDDDLEDNTVDFLNRCQDPNGGYAGGPGQMPHLATTYAAVNT 104

Query: 1947 LLTLGGERALSSINREKLHRFLLRMKDQSGGFRMHNAGEMDVRACYTAISVASILNILDD 1768
            L+TLGGE++L+SINR KL+ F+ RMK  +GGFRMH+ GE+DVRACYTAISVAS+LNILDD
Sbjct: 105  LITLGGEKSLASINRNKLYGFMRRMKQPNGGFRMHDEGEIDVRACYTAISVASVLNILDD 164

Query: 1767 ELVQNVGDFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPSLLDWVVF 1588
            EL++NVGDFIL CQTYEGG+AGEPGSEAHGGYTFCGLA MILI E +RLDLP LLDWVVF
Sbjct: 165  ELIKNVGDFILSCQTYEGGLAGEPGSEAHGGYTFCGLAAMILIGEVNRLDLPRLLDWVVF 224

Query: 1587 RQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSV-------AGQHLKLNVG--EEET 1435
            RQG ECGFQGR NKLVDGCYSFWQGG  AL+QRL S+       A Q + ++    E+E 
Sbjct: 225  RQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLHSIIDEQMAEASQFVTVSDAPEEKEC 284

Query: 1434 RGSTQNVGSSNVSDREEGSGSLNTSDKNYSDIGFSYIKRPAESGPLFHSIALQQYILLCS 1255
               T +  +S++  R EG     +SD    +IG+++I    +S PLFHSIALQQYILLCS
Sbjct: 285  LDGTSSHATSHI--RHEGMNESCSSD--VKNIGYNFISEWRQSEPLFHSIALQQYILLCS 340

Query: 1254 QVQEGGFKDKPGKYRDYYHTCYCLSGLSVCQHCWSKDSDSSPFPKAVFGPYSNLLEPIHP 1075
            Q Q+GG +DKPGK RD+YH+CYCLSGLS+CQ+ WSK  DS P PK V GPYSNLLEPIHP
Sbjct: 341  QEQDGGLRDKPGKRRDHYHSCYCLSGLSLCQYSWSKRPDSPPLPKVVMGPYSNLLEPIHP 400

Query: 1074 LYNIMLDRYYEAHDFFS 1024
            L+N++LDRY EAH+FFS
Sbjct: 401  LFNVVLDRYREAHEFFS 417