BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003618
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...   240   4e-61
ref|XP_002513523.1| polyadenylate-binding protein, putative [Ric...   219   6e-55
gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN398...   217   4e-54
ref|XP_002314085.1| predicted protein [Populus trichocarpa] gi|2...   216   5e-54
gb|ABK96138.1| unknown [Populus trichocarpa]                          216   5e-54

>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  240 bits (612), Expect = 4e-61
 Identities = 130/202 (64%), Positives = 144/202 (71%)
 Frame = -3

Query: 951 MAATDVEAVDFXXXXXXXXXXEGGAAIDIIDPXXXXXXXXXXXQLPKLKSAITGGXXXXX 772
           MA+ DVEAVDF          +G   +D   P            LPKLKSAITGG     
Sbjct: 1   MASADVEAVDFEPEDDDLMDEDGAVDVDNSSPRAP---------LPKLKSAITGGAPSSL 51

Query: 771 NVVTAPPLPRKTKGRGFREEISNNAERNNRFGGKDFDSLFSDGAPGPQRSIEGWIILVTG 592
                   P+KTKGRGFR++   +A+RN+RF  +DFDSL SDG PGPQRSIEGWIILVTG
Sbjct: 52  AAA-----PKKTKGRGFRDD--TDADRNSRFAARDFDSLDSDGGPGPQRSIEGWIILVTG 104

Query: 591 VHEEAQEDDLQNHFGEYGEVKNLHLNLDRRTGFVKGYALIEYERFEEAQTAISESNGVDL 412
           VHEEAQEDDLQN FGE+GEVKNLHLNLDRRTGFVKGYALIEYE  EEAQ AIS  NG +L
Sbjct: 105 VHEEAQEDDLQNAFGEFGEVKNLHLNLDRRTGFVKGYALIEYENLEEAQAAISAMNGTEL 164

Query: 411 LGQTLSVDWAFSNGPFFKKRNM 346
           L QT+SVDWAFSNGP FK+RNM
Sbjct: 165 LTQTISVDWAFSNGP-FKRRNM 185


>ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223547431|gb|EEF48926.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  219 bits (559), Expect = 6e-55
 Identities = 122/203 (60%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
 Frame = -3

Query: 951 MAATDVEAVDFXXXXXXXXXXEGGAAIDIIDPXXXXXXXXXXXQLPKLKSAITGGXXXXX 772
           MA  D EAVDF          +GG   D                LPKLKSAITGG     
Sbjct: 1   MANADAEAVDFEPEEDDLMDEDGGVDADA----------SPRAPLPKLKSAITGG----- 45

Query: 771 NVVTAPPLPRKTKGRGFREEISNNAERNNRFGGK-DFDSLFSDGAPGPQRSIEGWIILVT 595
              ++   PRKTKGRGFREE   +A+R  R   + DFDSL +DG PGPQRSIEGWIILVT
Sbjct: 46  -AASSLSAPRKTKGRGFREEA--DADRQTRLASRGDFDSLGTDGGPGPQRSIEGWIILVT 102

Query: 594 GVHEEAQEDDLQNHFGEYGEVKNLHLNLDRRTGFVKGYALIEYERFEEAQTAISESNGVD 415
           GVHEEAQEDDLQN FG++GE+KNLHLNLDRRTGFVKGYALIEYE+FEEAQ AI+  NG +
Sbjct: 103 GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYEKFEEAQNAIASLNGTE 162

Query: 414 LLGQTLSVDWAFSNGPFFKKRNM 346
           LL Q ++VDWAF NGP  K++NM
Sbjct: 163 LLTQIINVDWAFCNGP-TKRKNM 184


>gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN39899.1| unknown
           [Picea sitchensis]
          Length = 205

 Score =  217 bits (552), Expect = 4e-54
 Identities = 110/154 (71%), Positives = 123/154 (79%)
 Frame = -3

Query: 816 PKLKSAITGGXXXXXNVVTAPPLPRKTKGRGFREEISNNAERNNRFGGKDFDSLFSDGAP 637
           PKLKS ITGG             P+KTKGRGFREE   +AERN+RF  ++F+SL SDG P
Sbjct: 38  PKLKSTITGGTSQL-----GDGGPKKTKGRGFREE--TDAERNSRFAAREFESLDSDGGP 90

Query: 636 GPQRSIEGWIILVTGVHEEAQEDDLQNHFGEYGEVKNLHLNLDRRTGFVKGYALIEYERF 457
           GPQRSIEGWIILVTGVHEEAQEDDL   FGE+GE+KNLHLNLDRRTGFVKGYALIEYE F
Sbjct: 91  GPQRSIEGWIILVTGVHEEAQEDDLHELFGEFGEIKNLHLNLDRRTGFVKGYALIEYETF 150

Query: 456 EEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKK 355
           +EAQ AI+  NG +LL QT+SVDWAFSNGPF +K
Sbjct: 151 KEAQAAITNLNGAELLTQTISVDWAFSNGPFRRK 184


>ref|XP_002314085.1| predicted protein [Populus trichocarpa] gi|222850493|gb|EEE88040.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  216 bits (551), Expect = 5e-54
 Identities = 119/207 (57%), Positives = 140/207 (67%), Gaps = 5/207 (2%)
 Frame = -3

Query: 951 MAATDVEAVDFXXXXXXXXXXEGGAAIDIIDPXXXXXXXXXXXQLPKLKSAITGGXXXXX 772
           MA T+ EAVDF          +G   +D                LPKLKSAITGG     
Sbjct: 1   MANTEAEAVDFEPEDDDLMDEDGAVDVDASSSPRAP--------LPKLKSAITGGS---- 48

Query: 771 NVVTAPPL--PRKTKGRGFREEISNNAERNNRFGGKDFDSLFSDGAPGPQRSIEGWIILV 598
               +P L  P+KTKGRGFREE+  + ER +RF G+ FDSL SDG PGPQRS+EGWIILV
Sbjct: 49  ---ASPSLSAPKKTKGRGFREEV--DTERQSRFSGRGFDSLGSDGGPGPQRSVEGWIILV 103

Query: 597 TGVHEEAQEDDLQNHFGEYGEVKNLHLNLDRRTGFVKGYALIEYERFEEAQTAISESNGV 418
           +GVHEEAQ+D LQ  FGE+GE+KNLHLNLDRRTGFVKGYALIEYE FE+A+ AI+  NG 
Sbjct: 104 SGVHEEAQDDHLQEAFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEQAENAIASMNGG 163

Query: 417 DLLGQTLSVDWAFSNGP---FFKKRNM 346
            LL Q ++VDWAFSNGP     K++NM
Sbjct: 164 TLLEQVINVDWAFSNGPSNWALKRKNM 190


>gb|ABK96138.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  216 bits (551), Expect = 5e-54
 Identities = 119/207 (57%), Positives = 140/207 (67%), Gaps = 5/207 (2%)
 Frame = -3

Query: 951 MAATDVEAVDFXXXXXXXXXXEGGAAIDIIDPXXXXXXXXXXXQLPKLKSAITGGXXXXX 772
           MA T+ EAVDF          +G   +D                LPKLKSAITGG     
Sbjct: 1   MANTEAEAVDFEPEDDDLMDEDGAVDVDASSSPRAP--------LPKLKSAITGGS---- 48

Query: 771 NVVTAPPL--PRKTKGRGFREEISNNAERNNRFGGKDFDSLFSDGAPGPQRSIEGWIILV 598
               +P L  P+KTKGRGFREE+  + ER +RF G+ FDSL SDG PGPQRS+EGWIILV
Sbjct: 49  ---ASPSLSAPKKTKGRGFREEV--DTERQSRFSGRGFDSLGSDGGPGPQRSVEGWIILV 103

Query: 597 TGVHEEAQEDDLQNHFGEYGEVKNLHLNLDRRTGFVKGYALIEYERFEEAQTAISESNGV 418
           +GVHEEAQ+D LQ  FGE+GE+KNLHLNLDRRTGFVKGYALIEYE FE+A+ AI+  NG 
Sbjct: 104 SGVHEEAQDDHLQEAFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEQAENAIASMNGG 163

Query: 417 DLLGQTLSVDWAFSNGP---FFKKRNM 346
            LL Q ++VDWAFSNGP     K++NM
Sbjct: 164 TLLEQVINVDWAFSNGPSNWALKRKNM 190