BLASTX nr result
ID: Coptis21_contig00003614
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003614 (856 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]... 125 1e-26 dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]... 120 5e-25 ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cuc... 118 2e-24 ref|XP_002302948.1| high mobility group family [Populus trichoca... 114 2e-23 gb|ACJ83992.1| unknown [Medicago truncatula] gi|388511479|gb|AFK... 114 3e-23 >dbj|BAA11766.1| high mobility group protein [Canavalia gladiata] gi|1483173|dbj|BAA13133.1| high mobility group protein [Canavalia gladiata] Length = 178 Score = 125 bits (314), Expect = 1e-26 Identities = 55/77 (71%), Positives = 68/77 (88%) Frame = +1 Query: 91 MATEEVNKPPSLPPYPEMIFAAIDSLNDKNGSNRSAISTYIESTYGDLPEAHFNIMTDHL 270 MATEEVNKPPSLPPYPEM+ A+D+LN+ +GSN+SAIS YIESTYG+LP+ H ++ HL Sbjct: 1 MATEEVNKPPSLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHHL 60 Query: 271 NKLKDSGEVVFIKNNYM 321 NK+KDSGE+VF+KNNYM Sbjct: 61 NKMKDSGELVFLKNNYM 77 >dbj|BAA11767.1| high mobility group protein [Canavalia gladiata] gi|1483175|dbj|BAA13134.1| high mobility group protein [Canavalia gladiata] Length = 178 Score = 120 bits (300), Expect = 5e-25 Identities = 55/77 (71%), Positives = 66/77 (85%) Frame = +1 Query: 91 MATEEVNKPPSLPPYPEMIFAAIDSLNDKNGSNRSAISTYIESTYGDLPEAHFNIMTDHL 270 MATEEVNKPPSLPPY EMI A+DSLN+ NGSN+SAIS YIEST G+LP+ H ++ HL Sbjct: 1 MATEEVNKPPSLPPYTEMITKALDSLNEPNGSNKSAISKYIESTCGELPDGHSTLLAHHL 60 Query: 271 NKLKDSGEVVFIKNNYM 321 NK+K+SGE+VF+KNNYM Sbjct: 61 NKMKESGELVFLKNNYM 77 >ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus] gi|449484561|ref|XP_004156916.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus] Length = 180 Score = 118 bits (295), Expect = 2e-24 Identities = 54/77 (70%), Positives = 65/77 (84%) Frame = +1 Query: 91 MATEEVNKPPSLPPYPEMIFAAIDSLNDKNGSNRSAISTYIESTYGDLPEAHFNIMTDHL 270 MAT+EVNKPPSLPPYPEMIF AI++LN NGSN+S IS YIESTYG+LP H +++T HL Sbjct: 1 MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHL 60 Query: 271 NKLKDSGEVVFIKNNYM 321 N +K SG++VF KNNYM Sbjct: 61 NMMKASGDLVFWKNNYM 77 >ref|XP_002302948.1| high mobility group family [Populus trichocarpa] gi|222844674|gb|EEE82221.1| high mobility group family [Populus trichocarpa] Length = 190 Score = 114 bits (286), Expect = 2e-23 Identities = 50/77 (64%), Positives = 65/77 (84%) Frame = +1 Query: 91 MATEEVNKPPSLPPYPEMIFAAIDSLNDKNGSNRSAISTYIESTYGDLPEAHFNIMTDHL 270 MA EE+NKPPSLPPYPEMI +AI++LN+ NG N+++IS YIES YGDLP H +++ HL Sbjct: 1 MAAEEINKPPSLPPYPEMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHHL 60 Query: 271 NKLKDSGEVVFIKNNYM 321 N++KD+GE+VF KNNYM Sbjct: 61 NRMKDTGELVFWKNNYM 77 >gb|ACJ83992.1| unknown [Medicago truncatula] gi|388511479|gb|AFK43801.1| unknown [Medicago truncatula] Length = 193 Score = 114 bits (285), Expect = 3e-23 Identities = 50/77 (64%), Positives = 66/77 (85%) Frame = +1 Query: 91 MATEEVNKPPSLPPYPEMIFAAIDSLNDKNGSNRSAISTYIESTYGDLPEAHFNIMTDHL 270 MAT+EVNKP SLPPYPEMI A+++LN+ NGSN+S+IS YIES YG+LPE H ++ +HL Sbjct: 1 MATQEVNKPLSLPPYPEMIMKALEALNEPNGSNKSSISNYIESIYGELPEGHSIVLANHL 60 Query: 271 NKLKDSGEVVFIKNNYM 321 N++KD+G++VF KNNYM Sbjct: 61 NQMKDNGDLVFAKNNYM 77