BLASTX nr result

ID: Coptis21_contig00003611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003611
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265506.1| PREDICTED: uncharacterized protein LOC100246...    99   1e-18
ref|XP_002522252.1| conserved hypothetical protein [Ricinus comm...    89   1e-15
ref|XP_002305727.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
ref|XP_002317394.1| predicted protein [Populus trichocarpa] gi|2...    81   3e-13
ref|XP_003634658.1| PREDICTED: uncharacterized protein LOC100250...    79   1e-12

>ref|XP_002265506.1| PREDICTED: uncharacterized protein LOC100246308 [Vitis vinifera]
           gi|147781893|emb|CAN69942.1| hypothetical protein
           VITISV_006130 [Vitis vinifera]
          Length = 97

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = -1

Query: 697 MARSYFTFLVFYLALSVFFIQSIDGRKLLGMEKVD-DKLKVPSLEDSLVLSSLAKGKVPP 521
           MA      L+ ++  S F + S+D RKLL ME+   +K  +P+LE SLVL++L KG VP 
Sbjct: 1   MASHKALLLILFVVFSSF-LPSLDARKLLDMEEDSHNKKSIPALEASLVLAALPKGTVPA 59

Query: 520 SAPSNHGHAVIIDQKLFVRHFASLDRILRSVPSPGVGH 407
           S+PS  GHA+++D+KL  RH A +DRILRSVPSPGVGH
Sbjct: 60  SSPSKKGHAMVVDEKLIARHLAVVDRILRSVPSPGVGH 97


>ref|XP_002522252.1| conserved hypothetical protein [Ricinus communis]
           gi|223538505|gb|EEF40110.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 100

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 52/101 (51%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
 Frame = -1

Query: 697 MARSYFTFLVFYLALSVFFIQSIDGRKLLGM----EKVDDKLKVPSLEDSLVLSSLAKGK 530
           MARS    L+F LA + F + +I GRKLL M    E       VPS+  SLV S+L K  
Sbjct: 1   MARSIALALIFLLAFTTF-VSNIQGRKLLMMTSDAEGTSSTSTVPSMFASLVFSALPKST 59

Query: 529 VPPSAPSNHGHAVIIDQKLFVRHFASLDRILRSVPSPGVGH 407
           V  S+PS  GHA + +++LF RH AS+DRIL+SVPSPGVGH
Sbjct: 60  VRSSSPSRKGHATLDNEELFRRHLASIDRILQSVPSPGVGH 100


>ref|XP_002305727.1| predicted protein [Populus trichocarpa] gi|222848691|gb|EEE86238.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 9/106 (8%)
 Frame = -1

Query: 697 MARSYFTFLVFYLALSVFFIQSIDGRKLLGMEKVDDKLKVPSLED---------SLVLSS 545
           MAR     L+F ++ +   + +I+GRKLL       +    S ++         SLVLS+
Sbjct: 1   MARFGAVVLIFLVSFATI-VSNIEGRKLLMSTGTPQENSSSSNKEGTSSVSSFASLVLSA 59

Query: 544 LAKGKVPPSAPSNHGHAVIIDQKLFVRHFASLDRILRSVPSPGVGH 407
           L KG VP S+PS  GHA + +++LF RH AS+DRILRSVPSPGVGH
Sbjct: 60  LPKGTVPSSSPSKKGHATLDNEQLFARHLASIDRILRSVPSPGVGH 105


>ref|XP_002317394.1| predicted protein [Populus trichocarpa] gi|222860459|gb|EEE98006.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
 Frame = -1

Query: 697 MARSYFTFLVFYLALSVFFIQSIDGRKLLGMEKVD-------DKLKVPSLEDSLVLSSLA 539
           MAR      +F+ + + F + +I+GRKLL             DK  V S   SLVLS+L 
Sbjct: 1   MARFGAVVFIFFFSFAAF-MSNIEGRKLLMSTSAQESNSNSWDKRSVSSFA-SLVLSALP 58

Query: 538 KGKVPPSA-PSNHGHAVIIDQKLFVRHFASLDRILRSVPSPGVGH 407
           KGKVP S+ PS  GHA + ++++F RH AS+DRILRSVPSPGVG+
Sbjct: 59  KGKVPSSSSPSKKGHATLDNEQIFARHLASIDRILRSVPSPGVGN 103


>ref|XP_003634658.1| PREDICTED: uncharacterized protein LOC100250351 [Vitis vinifera]
          Length = 97

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 47/100 (47%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
 Frame = -1

Query: 697 MARSYFTFLVFYLALSVFFIQSIDGRKLLGMEKVDDKLKVPSLEDSLVLSSLAKGKVPPS 518
           MA+S  +  + ++ + V  I ++D RKLL MEK   K  V S+E+SL+L SL KG  PPS
Sbjct: 1   MAKSSSSVPLIFILVLVLSISALDARKLLSMEK---KEGVSSMEESLILPSLPKGSTPPS 57

Query: 517 APSNHGHAVI-IDQKLFVRHFASL-DRIL-RSVPSPGVGH 407
           +PS+ G+A++ I+ +LF  H  S+ DR+L  SVPSPG+GH
Sbjct: 58  SPSDKGYAMVNINGRLFSIHLPSIKDRMLGESVPSPGIGH 97


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