BLASTX nr result

ID: Coptis21_contig00003603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003603
         (1412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525902.1| l-lactate dehydrogenase, putative [Ricinus c...   590   e-166
ref|XP_002303510.1| predicted protein [Populus trichocarpa] gi|2...   584   e-164
gb|ADM88555.1| lactate dehydrogenase [Camellia sinensis]              580   e-163
ref|XP_002271251.1| PREDICTED: L-lactate dehydrogenase A [Vitis ...   578   e-163
emb|CAN75749.1| hypothetical protein VITISV_032950 [Vitis vinifera]   578   e-162

>ref|XP_002525902.1| l-lactate dehydrogenase, putative [Ricinus communis]
            gi|223534816|gb|EEF36506.1| l-lactate dehydrogenase,
            putative [Ricinus communis]
          Length = 350

 Score =  590 bits (1521), Expect = e-166
 Identities = 298/350 (85%), Positives = 323/350 (92%)
 Frame = -1

Query: 1256 MQKXXXXXSFGPEGLNIAKSFFKPIQQTSSPSSNNRQTKISVIGTGNVGMAIAQTILTQD 1077
            MQ+     S GP GL++++ FFKPI  TS PS   R TKISVIGTGNVGMAIAQTILTQD
Sbjct: 1    MQQSSSAASLGPGGLDLSQVFFKPIHNTSPPSPTKRHTKISVIGTGNVGMAIAQTILTQD 60

Query: 1076 LADILALVDAKPEKLRGEMLDLQHAAAFLPRTKILASVDYSVTEGSDLCIVTAGARQISG 897
            LAD LALVD  P KLRGEMLDLQHAAAFLPRTKILAS DYSVT GSDLCIVTAGARQI G
Sbjct: 61   LADELALVDVNPNKLRGEMLDLQHAAAFLPRTKILASPDYSVTIGSDLCIVTAGARQIPG 120

Query: 896  ESRLNLLQRNLTLFRDVIPPLAKYSPDSILVIVSNPVDVLTYVAWKLSGFPANRVIGSGT 717
            ESRLNLLQRN+TLF+++IPPLAKYSPDSIL+IVSNPVD+LT++AWKLSGFP+NRV+GSGT
Sbjct: 121  ESRLNLLQRNVTLFKNIIPPLAKYSPDSILMIVSNPVDILTFIAWKLSGFPSNRVVGSGT 180

Query: 716  NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYE 537
            NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVP+LSFLEKQ I YE
Sbjct: 181  NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLEKQDIAYE 240

Query: 536  KETLENIHKAVVESAYEVISLKGYTSWAIGYSVANLARTLLRDQRKIHPVSILAKGFYGI 357
            KETLENIHKAVV+SAYEVISLKGYTSWAIGYS ANLAR+LLRDQRKIHPVS+LAKGFYGI
Sbjct: 241  KETLENIHKAVVDSAYEVISLKGYTSWAIGYSAANLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 356  DEGEVFLSLPAQLGRGGVIGITNVHLTDEEAQKLRDSAKTIAEVQSQLGI 207
            D G+VFLSLPAQLGRGGV+G+TNVHLT+EEAQ+LRDSAKT+ EVQSQLGI
Sbjct: 301  DGGDVFLSLPAQLGRGGVLGVTNVHLTEEEAQRLRDSAKTLLEVQSQLGI 350


>ref|XP_002303510.1| predicted protein [Populus trichocarpa] gi|222840942|gb|EEE78489.1|
            predicted protein [Populus trichocarpa]
          Length = 350

 Score =  584 bits (1505), Expect = e-164
 Identities = 296/350 (84%), Positives = 322/350 (92%)
 Frame = -1

Query: 1256 MQKXXXXXSFGPEGLNIAKSFFKPIQQTSSPSSNNRQTKISVIGTGNVGMAIAQTILTQD 1077
            MQK     S GP GL+++  FFKPIQ TS PS   RQTKISVIG GNVGMAIAQTILTQD
Sbjct: 1    MQKSASASSLGPGGLDLSDMFFKPIQNTSPPSPTKRQTKISVIGAGNVGMAIAQTILTQD 60

Query: 1076 LADILALVDAKPEKLRGEMLDLQHAAAFLPRTKILASVDYSVTEGSDLCIVTAGARQISG 897
            LAD +ALVDA+PEKLRGEMLDLQHAAAFLPRTKI+AS DY VT GSDLCIVTAGARQI+G
Sbjct: 61   LADEIALVDAQPEKLRGEMLDLQHAAAFLPRTKIIASTDYLVTVGSDLCIVTAGARQIAG 120

Query: 896  ESRLNLLQRNLTLFRDVIPPLAKYSPDSILVIVSNPVDVLTYVAWKLSGFPANRVIGSGT 717
            ESRLNLLQRN+ LFR +IPPLAKYSP +IL+IVSNPVDVLTYVAWKLSGFP+NRV+GSGT
Sbjct: 121  ESRLNLLQRNVALFRGIIPPLAKYSPGTILMIVSNPVDVLTYVAWKLSGFPSNRVVGSGT 180

Query: 716  NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYE 537
            NLDSSRFRFLIADHLDVNAQDVQA I+GEHGDSSVALWSSISVGGVPVLSFLEKQQI YE
Sbjct: 181  NLDSSRFRFLIADHLDVNAQDVQASIIGEHGDSSVALWSSISVGGVPVLSFLEKQQIPYE 240

Query: 536  KETLENIHKAVVESAYEVISLKGYTSWAIGYSVANLARTLLRDQRKIHPVSILAKGFYGI 357
            KETLE IHKAVV+SAYEVISLKGYTSWAIGYS ANLAR++LRDQRKIHPVS+LAKGFYGI
Sbjct: 241  KETLEGIHKAVVDSAYEVISLKGYTSWAIGYSAANLARSILRDQRKIHPVSVLAKGFYGI 300

Query: 356  DEGEVFLSLPAQLGRGGVIGITNVHLTDEEAQKLRDSAKTIAEVQSQLGI 207
            D+G+VFLSLPAQLGRGGV+G+TNVHLTDEEAQ+LR SA+TI +VQSQLG+
Sbjct: 301  DDGDVFLSLPAQLGRGGVLGVTNVHLTDEEAQRLRKSAQTILKVQSQLGL 350


>gb|ADM88555.1| lactate dehydrogenase [Camellia sinensis]
          Length = 350

 Score =  580 bits (1495), Expect = e-163
 Identities = 293/340 (86%), Positives = 318/340 (93%)
 Frame = -1

Query: 1226 GPEGLNIAKSFFKPIQQTSSPSSNNRQTKISVIGTGNVGMAIAQTILTQDLADILALVDA 1047
            GP GL+IA++FFKPIQ  + PS  NR TKISVIGTGNVGMAIAQTILTQDLAD LALVDA
Sbjct: 11   GPGGLDIAQAFFKPIQNMAPPSPTNRHTKISVIGTGNVGMAIAQTILTQDLADELALVDA 70

Query: 1046 KPEKLRGEMLDLQHAAAFLPRTKILASVDYSVTEGSDLCIVTAGARQISGESRLNLLQRN 867
             P KLRGEMLDLQHAAAFLPRTKILASVDYSVT GSDLCIVTAGARQ  GESRLNLLQRN
Sbjct: 71   IPNKLRGEMLDLQHAAAFLPRTKILASVDYSVTAGSDLCIVTAGARQNPGESRLNLLQRN 130

Query: 866  LTLFRDVIPPLAKYSPDSILVIVSNPVDVLTYVAWKLSGFPANRVIGSGTNLDSSRFRFL 687
            + LF  ++PPLAK+SP++IL+IVSNPVDVLTYVAWKLSGFP+NRVIGSGTNLDSSRFRFL
Sbjct: 131  VALFSKIVPPLAKHSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFL 190

Query: 686  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYEKETLENIHKA 507
            IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLE+QQI YEKETLE IHK 
Sbjct: 191  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLERQQIAYEKETLEKIHKE 250

Query: 506  VVESAYEVISLKGYTSWAIGYSVANLARTLLRDQRKIHPVSILAKGFYGIDEGEVFLSLP 327
            VVESAYEVISLKGYTSWAIGYSVANLART+LRDQR+IHPVS++AKGFYGI +G+VFLSLP
Sbjct: 251  VVESAYEVISLKGYTSWAIGYSVANLARTILRDQRRIHPVSVIAKGFYGIADGDVFLSLP 310

Query: 326  AQLGRGGVIGITNVHLTDEEAQKLRDSAKTIAEVQSQLGI 207
            AQLGR GV+G+TNVHLT+EEA+KLRDSAKTI EVQ+QLG+
Sbjct: 311  AQLGRSGVLGVTNVHLTEEEARKLRDSAKTILEVQNQLGV 350


>ref|XP_002271251.1| PREDICTED: L-lactate dehydrogenase A [Vitis vinifera]
            gi|297741178|emb|CBI31909.3| unnamed protein product
            [Vitis vinifera]
          Length = 350

 Score =  578 bits (1491), Expect = e-163
 Identities = 288/350 (82%), Positives = 322/350 (92%)
 Frame = -1

Query: 1256 MQKXXXXXSFGPEGLNIAKSFFKPIQQTSSPSSNNRQTKISVIGTGNVGMAIAQTILTQD 1077
            M K     S GP GL++ ++FFKPIQQT+ PS   R TK+SVIG GNVGMAIAQTILTQD
Sbjct: 1    MHKSGSASSLGPGGLDLTQAFFKPIQQTAPPSPTKRHTKVSVIGVGNVGMAIAQTILTQD 60

Query: 1076 LADILALVDAKPEKLRGEMLDLQHAAAFLPRTKILASVDYSVTEGSDLCIVTAGARQISG 897
            L D LALVD   +KLRGEMLDLQHAAAFLPRTKI ASVDY++T GSDLCIVTAGARQI+G
Sbjct: 61   LVDELALVDVNADKLRGEMLDLQHAAAFLPRTKIHASVDYAITAGSDLCIVTAGARQIAG 120

Query: 896  ESRLNLLQRNLTLFRDVIPPLAKYSPDSILVIVSNPVDVLTYVAWKLSGFPANRVIGSGT 717
            ESRLNLLQRN++LF  ++PPLAKYSPDSIL+IVSNPVD+LTYVAWKLSGFP+NRV+GSGT
Sbjct: 121  ESRLNLLQRNVSLFSRIVPPLAKYSPDSILLIVSNPVDILTYVAWKLSGFPSNRVLGSGT 180

Query: 716  NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYE 537
            NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQI YE
Sbjct: 181  NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIAYE 240

Query: 536  KETLENIHKAVVESAYEVISLKGYTSWAIGYSVANLARTLLRDQRKIHPVSILAKGFYGI 357
            KETLENIHKAV++SAYEVISLKGYTSWAIGYS A+LAR++LR+QR+IHPVS+LAKGFYGI
Sbjct: 241  KETLENIHKAVIDSAYEVISLKGYTSWAIGYSAASLARSILRNQRRIHPVSVLAKGFYGI 300

Query: 356  DEGEVFLSLPAQLGRGGVIGITNVHLTDEEAQKLRDSAKTIAEVQSQLGI 207
            + G+VFLSLPAQLGRGG++G+TNVHLTDEEAQ+LRDSAKTI EVQ+QLG+
Sbjct: 301  EGGDVFLSLPAQLGRGGILGVTNVHLTDEEAQRLRDSAKTILEVQNQLGL 350


>emb|CAN75749.1| hypothetical protein VITISV_032950 [Vitis vinifera]
          Length = 350

 Score =  578 bits (1489), Expect = e-162
 Identities = 287/350 (82%), Positives = 321/350 (91%)
 Frame = -1

Query: 1256 MQKXXXXXSFGPEGLNIAKSFFKPIQQTSSPSSNNRQTKISVIGTGNVGMAIAQTILTQD 1077
            M K     + GP GL++ ++FFKPIQQT+ PS   R TK+SVIG GNVGMAIAQTILTQD
Sbjct: 1    MHKSGSASALGPGGLDLTQAFFKPIQQTAPPSPTKRHTKVSVIGVGNVGMAIAQTILTQD 60

Query: 1076 LADILALVDAKPEKLRGEMLDLQHAAAFLPRTKILASVDYSVTEGSDLCIVTAGARQISG 897
            L D LALVD    KLRGEMLDLQHAAAFLPRTKI ASVDY++T GSDLCIVTAGARQI+G
Sbjct: 61   LVDELALVDVNANKLRGEMLDLQHAAAFLPRTKIHASVDYAITXGSDLCIVTAGARQIAG 120

Query: 896  ESRLNLLQRNLTLFRDVIPPLAKYSPDSILVIVSNPVDVLTYVAWKLSGFPANRVIGSGT 717
            ESRLNLLQRN++LF  ++PPLAKYSPDSIL+IVSNPVD+LTYVAWKLSGFP+NRV+GSGT
Sbjct: 121  ESRLNLLQRNVSLFSRIVPPLAKYSPDSILLIVSNPVDILTYVAWKLSGFPSNRVLGSGT 180

Query: 716  NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYE 537
            NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQI YE
Sbjct: 181  NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIAYE 240

Query: 536  KETLENIHKAVVESAYEVISLKGYTSWAIGYSVANLARTLLRDQRKIHPVSILAKGFYGI 357
            KETLENIHKAV++SAYEVISLKGYTSWAIGYS A+LAR++LR+QR+IHPVS+LAKGFYGI
Sbjct: 241  KETLENIHKAVIDSAYEVISLKGYTSWAIGYSAASLARSILRNQRRIHPVSVLAKGFYGI 300

Query: 356  DEGEVFLSLPAQLGRGGVIGITNVHLTDEEAQKLRDSAKTIAEVQSQLGI 207
            + G+VFLSLPAQLGRGG++G+TNVHLTDEEAQ+LRDSAKTI EVQ+QLG+
Sbjct: 301  EGGDVFLSLPAQLGRGGILGVTNVHLTDEEAQRLRDSAKTILEVQNQLGL 350


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